RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 DICER1Q9UPY3 1922 aaKnown RBP10.11□□□□□ -0.79
VCAN-207ENST00000507162 SOS1Q07889 1333 aaPredicted RBP10.1□□□□□ -0.79
VCAN-207ENST00000507162 SCN4AP35499 1836 aa10.1□□□□□ -0.79
VCAN-207ENST00000507162 CELF2O95319 508 aaKnown RBP10.1□□□□□ -0.79
VCAN-207ENST00000507162 SAPCD2Q86UD0 394 aa10.1□□□□□ -0.79
VCAN-207ENST00000507162 PUS7Q96PZ0 661 aaKnown RBP10.1□□□□□ -0.79
VCAN-207ENST00000507162 ZIC5Q96T25 663 aa10.1□□□□□ -0.79
VCAN-207ENST00000507162 CANXP27824 592 aaKnown RBP10.09□□□□□ -0.79
VCAN-207ENST00000507162 EPS15P42566 896 aa10.09□□□□□ -0.79
VCAN-207ENST00000507162 PLEKHO1Q53GL0 409 aaPredicted RBP10.09□□□□□ -0.79
VCAN-207ENST00000507162 CCDC93Q567U6 631 aa10.09□□□□□ -0.79
VCAN-207ENST00000507162 TBC1D9BQ66K14 1250 aa10.09□□□□□ -0.79
VCAN-207ENST00000507162 STYK1Q6J9G0 422 aa10.09□□□□□ -0.79
VCAN-207ENST00000507162 ZNF530Q6P9A1 599 aaPredicted RBP10.09□□□□□ -0.79
VCAN-207ENST00000507162 ZNF408Q9H9D4 720 aa10.09□□□□□ -0.79
VCAN-207ENST00000507162 TONSLQ96HA7 1378 aa10.09□□□□□ -0.79
VCAN-207ENST00000507162 AFDNP55196 1824 aaKnown RBP10.08□□□□□ -0.8
VCAN-207ENST00000507162 FKBP4Q02790 459 aaKnown RBP eCLIP10.08□□□□□ -0.8
VCAN-207ENST00000507162 NEUROD1Q13562 356 aa10.08□□□□□ -0.8
VCAN-207ENST00000507162 PRR5LQ6MZQ0 368 aa10.08□□□□□ -0.8
VCAN-207ENST00000507162 GPC2Q8N158 579 aa10.08□□□□□ -0.8
VCAN-207ENST00000507162 MASTLQ96GX5 879 aa10.08□□□□□ -0.8
VCAN-207ENST00000507162 FER1L6Q2WGJ9 1857 aa10.07□□□□□ -0.8
VCAN-207ENST00000507162 FZD9O00144 591 aa10.07□□□□□ -0.8
VCAN-207ENST00000507162 TRPA1O75762 1119 aa10.07□□□□□ -0.8
VCAN-207ENST00000507162 SRGNP10124 158 aa10.07□□□□□ -0.8
VCAN-207ENST00000507162 CYP19A1P11511 503 aaPredicted RBP10.07□□□□□ -0.8
VCAN-207ENST00000507162 EIF6P56537 245 aaKnown RBP10.07□□□□□ -0.8
VCAN-207ENST00000507162 OLFM4Q6UX06 510 aa10.07□□□□□ -0.8
VCAN-207ENST00000507162 CTU1Q7Z7A3 348 aaKnown RBP10.07□□□□□ -0.8
VCAN-207ENST00000507162 SYNE4Q8N205 404 aa10.07□□□□□ -0.8
VCAN-207ENST00000507162 JDP2Q8WYK2 163 aa10.07□□□□□ -0.8
VCAN-207ENST00000507162 ZBTB1Q9Y2K1 713 aa10.07□□□□□ -0.8
VCAN-207ENST00000507162 CUL9Q8IWT3 2517 aa10.07□□□□□ -0.8
VCAN-207ENST00000507162 COL5A3P25940 1745 aaPredicted RBP10.07□□□□□ -0.8
VCAN-207ENST00000507162 COL15A1P39059 1388 aa10.06□□□□□ -0.8
VCAN-207ENST00000507162 KIF24Q5T7B8 1368 aa10.06□□□□□ -0.8
VCAN-207ENST00000507162 IARSP41252 1262 aaKnown RBP10.06□□□□□ -0.8
VCAN-207ENST00000507162 FXR1P51114 621 aaKnown RBP eCLIP10.06□□□□□ -0.8
VCAN-207ENST00000507162 NOGQ13253 232 aa10.06□□□□□ -0.8
VCAN-207ENST00000507162 C1orf141Q5JVX7 400 aa10.06□□□□□ -0.8
VCAN-207ENST00000507162 C7orf43Q8WVR3 580 aa10.06□□□□□ -0.8
VCAN-207ENST00000507162 SIN3AQ96ST3 1273 aa10.06□□□□□ -0.8
VCAN-207ENST00000507162 HPS5Q9UPZ3 1129 aa10.06□□□□□ -0.8
VCAN-207ENST00000507162 ZNF330Q9Y3S2 320 aaPredicted RBP10.06□□□□□ -0.8
VCAN-207ENST00000507162 WASHC2AQ641Q2 1341 aa10.06□□□□□ -0.8
VCAN-207ENST00000507162 LTBP1Q14766 1721 aa10.05□□□□□ -0.8
VCAN-207ENST00000507162 ST5P78524 1137 aa10.05□□□□□ -0.8
VCAN-207ENST00000507162 USP50Q70EL3 339 aaPredicted RBP10.05□□□□□ -0.8
VCAN-207ENST00000507162 RTKN2Q8IZC4 609 aa10.05□□□□□ -0.8
VCAN-207ENST00000507162 CNBD1Q8NA66 436 aa10.05□□□□□ -0.8
VCAN-207ENST00000507162 SLC17A8Q8NDX2 589 aa10.05□□□□□ -0.8
VCAN-207ENST00000507162 HHIPL1Q96JK4 782 aa10.05□□□□□ -0.8
VCAN-207ENST00000507162 GLIS2Q9BZE0 524 aaPredicted RBP10.05□□□□□ -0.8
VCAN-207ENST00000507162 SLX4Q8IY92 1834 aa10.05□□□□□ -0.8
VCAN-207ENST00000507162 SLC39A6Q13433 755 aa10.04□□□□□ -0.8
VCAN-207ENST00000507162 AKAP4Q5JQC9 854 aa10.04□□□□□ -0.8
VCAN-207ENST00000507162 SETDB2Q96T68 719 aa10.04□□□□□ -0.8
VCAN-207ENST00000507162 RNF186Q9NXI6 227 aa10.04□□□□□ -0.8
VCAN-207ENST00000507162 TBC1D2BQ9UPU7 963 aa10.04□□□□□ -0.8
VCAN-207ENST00000507162 DLEC1Q9Y238 1755 aa10.03□□□□□ -0.8
VCAN-207ENST00000507162 ZNF831Q5JPB2 1677 aa10.03□□□□□ -0.8
VCAN-207ENST00000507162 A0A087WZG4 1122 aa10.03□□□□□ -0.8
VCAN-207ENST00000507162 HUNKP57058 714 aa10.03□□□□□ -0.8
VCAN-207ENST00000507162 EIF4A2Q14240 407 aaKnown RBP10.03□□□□□ -0.8
VCAN-207ENST00000507162 AMOTQ4VCS5 1084 aa10.03□□□□□ -0.8
VCAN-207ENST00000507162 ADAMTSL1Q8N6G6 1762 aa10.03□□□□□ -0.8
VCAN-207ENST00000507162 THSD7BQ9C0I4 1608 aa10.03□□□□□ -0.8
VCAN-207ENST00000507162 NCAPD2Q15021 1401 aa10.02□□□□□ -0.81
VCAN-207ENST00000507162 SCNN1DP51172 638 aa10.02□□□□□ -0.81
VCAN-207ENST00000507162 KIF23Q02241 960 aaPredicted RBP10.02□□□□□ -0.81
VCAN-207ENST00000507162 NRXN2Q9P2S2 1712 aa10.02□□□□□ -0.81
VCAN-207ENST00000507162 NPR1P16066 1061 aa10.01□□□□□ -0.81
VCAN-207ENST00000507162 NPM2Q86SE8 214 aaKnown RBP10.01□□□□□ -0.81
VCAN-207ENST00000507162 SAGE1Q9NXZ1 904 aa10.01□□□□□ -0.81
VCAN-207ENST00000507162 HDAC9Q9UKV0 1011 aa10.01□□□□□ -0.81
VCAN-207ENST00000507162 TRPM7Q96QT4 1865 aa10□□□□□ -0.81
VCAN-207ENST00000507162 TRIOBPQ9H2D6 2365 aa10□□□□□ -0.81
VCAN-207ENST00000507162 TNNT2P45379 298 aaPredicted RBP10□□□□□ -0.81
VCAN-207ENST00000507162 EIF5P55010 431 aaKnown RBP10□□□□□ -0.81
VCAN-207ENST00000507162 LARGE2Q8N3Y3 721 aa10□□□□□ -0.81
VCAN-207ENST00000507162 ADARB2Q9NS39 739 aaKnown RBP10□□□□□ -0.81
VCAN-207ENST00000507162 POLKQ9UBT6 870 aa10□□□□□ -0.81
VCAN-207ENST00000507162 ADAMTS7Q9UKP4 1686 aa9.99□□□□□ -0.81
VCAN-207ENST00000507162 STARD3NLO95772 234 aa9.99□□□□□ -0.81
VCAN-207ENST00000507162 ZNF157P51786 506 aaPredicted RBP9.99□□□□□ -0.81
VCAN-207ENST00000507162 PKN2Q16513 984 aaKnown RBP9.99□□□□□ -0.81
VCAN-207ENST00000507162 RGMBQ6NW40 437 aa9.99□□□□□ -0.81
VCAN-207ENST00000507162 CDC37L1Q7L3B6 337 aa9.99□□□□□ -0.81
VCAN-207ENST00000507162 USP48Q86UV5 1035 aa9.99□□□□□ -0.81
VCAN-207ENST00000507162 NBPF5PQ86XG9 351 aaPredicted RBP9.99□□□□□ -0.81
VCAN-207ENST00000507162 SLC52A2Q9HAB3 445 aa9.99□□□□□ -0.81
VCAN-207ENST00000507162 LGR6Q9HBX8 967 aa9.99□□□□□ -0.81
VCAN-207ENST00000507162 CEP290O15078 2479 aa9.98□□□□□ -0.81
VCAN-207ENST00000507162 ANKRD31Q8N7Z5 1873 aa9.98□□□□□ -0.81
VCAN-207ENST00000507162 FAM177BA6PVY3 158 aa9.98□□□□□ -0.81
VCAN-207ENST00000507162 ALDH1B1P30837 517 aa9.98□□□□□ -0.81
VCAN-207ENST00000507162 DLK2Q6UY11 383 aa9.98□□□□□ -0.81
VCAN-207ENST00000507162 CCDC102AQ96A19 550 aa9.98□□□□□ -0.81
VCAN-207ENST00000507162 TESK2Q96S53 571 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms