RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 NFATC2IPQ8NCF5 419 aa9.07□□□□□ -0.96
SPCS3-202ENST00000507001 ELOA3Q8NG57 546 aa9.07□□□□□ -0.96
SPCS3-202ENST00000507001 ADAMTS19Q8TE59 1207 aa9.07□□□□□ -0.96
SPCS3-202ENST00000507001 PRR12Q9ULL5 1215 aa9.07□□□□□ -0.96
SPCS3-202ENST00000507001 PCBP4P57723 403 aaKnown RBP9.06□□□□□ -0.96
SPCS3-202ENST00000507001 SPDYE3A6NKU9 549 aa9.05□□□□□ -0.96
SPCS3-202ENST00000507001 TEAD4Q15561 434 aa9.05□□□□□ -0.96
SPCS3-202ENST00000507001 PLVAPQ9BX97 442 aa9.05□□□□□ -0.96
SPCS3-202ENST00000507001 STRN4Q9NRL3 753 aa9.05□□□□□ -0.96
SPCS3-202ENST00000507001 NOD1Q9Y239 953 aa9.05□□□□□ -0.96
SPCS3-202ENST00000507001 ADARB2-AS1A8MUL3 147 aa9.04□□□□□ -0.96
SPCS3-202ENST00000507001 EML1O00423 815 aa9.04□□□□□ -0.96
SPCS3-202ENST00000507001 SIN3BO75182 1162 aa9.04□□□□□ -0.96
SPCS3-202ENST00000507001 ITGB7P26010 798 aa9.04□□□□□ -0.96
SPCS3-202ENST00000507001 EPHA4P54764 986 aa9.04□□□□□ -0.96
SPCS3-202ENST00000507001 BICDL1Q6ZP65 573 aa9.04□□□□□ -0.96
SPCS3-202ENST00000507001 ZDHHC1Q8WTX9 485 aa9.04□□□□□ -0.96
SPCS3-202ENST00000507001 PODXL2Q9NZ53 605 aa9.04□□□□□ -0.96
SPCS3-202ENST00000507001 PIK3CDO00329 1044 aa9.03□□□□□ -0.96
SPCS3-202ENST00000507001 ALAS2P22557 587 aa9.03□□□□□ -0.96
SPCS3-202ENST00000507001 TXLNAP40222 546 aa9.03□□□□□ -0.96
SPCS3-202ENST00000507001 PRDM6Q9NQX0 595 aa9.03□□□□□ -0.96
SPCS3-202ENST00000507001 PDIA4P13667 645 aaKnown RBP9.02□□□□□ -0.97
SPCS3-202ENST00000507001 GATA4P43694 442 aa9.02□□□□□ -0.97
SPCS3-202ENST00000507001 GTF2IP78347 998 aa9.02□□□□□ -0.97
SPCS3-202ENST00000507001 SYT9Q86SS6 491 aa9.02□□□□□ -0.97
SPCS3-202ENST00000507001 TNFRSF25Q93038 417 aa9.02□□□□□ -0.97
SPCS3-202ENST00000507001 L3MBTL2Q969R5 705 aa9.02□□□□□ -0.97
SPCS3-202ENST00000507001 ZNF358Q9NW07 568 aa9.02□□□□□ -0.97
SPCS3-202ENST00000507001 NOS2P35228 1153 aa9.01□□□□□ -0.97
SPCS3-202ENST00000507001 C7orf43Q8WVR3 580 aa9.01□□□□□ -0.97
SPCS3-202ENST00000507001 KRTAP4-8Q9BYQ9 185 aa9.01□□□□□ -0.97
SPCS3-202ENST00000507001 PARP3Q9Y6F1 533 aa9.01□□□□□ -0.97
SPCS3-202ENST00000507001 SKIP12755 728 aa9□□□□□ -0.97
SPCS3-202ENST00000507001 DOC2BQ14184 412 aa9□□□□□ -0.97
SPCS3-202ENST00000507001 PRRT3Q5FWE3 981 aa9□□□□□ -0.97
SPCS3-202ENST00000507001 SEMA6BQ9H3T3 888 aa9□□□□□ -0.97
SPCS3-202ENST00000507001 POTEAQ6S8J7 498 aa8.99□□□□□ -0.97
SPCS3-202ENST00000507001 RETREG2Q8NC44 543 aa8.99□□□□□ -0.97
SPCS3-202ENST00000507001 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.99□□□□□ -0.97
SPCS3-202ENST00000507001 HIRAP54198 1017 aaPredicted RBP8.98□□□□□ -0.97
SPCS3-202ENST00000507001 NCOA4Q13772 614 aa8.98□□□□□ -0.97
SPCS3-202ENST00000507001 LRRC69Q6ZNQ3 347 aa8.98□□□□□ -0.97
SPCS3-202ENST00000507001 SLC9A9Q8IVB4 645 aa8.98□□□□□ -0.97
SPCS3-202ENST00000507001 UCN2Q96RP3 112 aa8.98□□□□□ -0.97
SPCS3-202ENST00000507001 PSME1Q06323 249 aa8.97□□□□□ -0.97
SPCS3-202ENST00000507001 COL9A3Q14050 684 aaPredicted RBP8.97□□□□□ -0.97
SPCS3-202ENST00000507001 RSPO4Q2I0M5 234 aaPredicted RBP8.97□□□□□ -0.97
SPCS3-202ENST00000507001 SERTM1A2A2V5 107 aa8.96□□□□□ -0.98
SPCS3-202ENST00000507001 ATP9BO43861 1147 aa8.96□□□□□ -0.98
SPCS3-202ENST00000507001 RFX1P22670 979 aa8.96□□□□□ -0.98
SPCS3-202ENST00000507001 KCNQ4P56696 695 aa8.96□□□□□ -0.98
SPCS3-202ENST00000507001 NKAPLQ5M9Q1 402 aa8.96□□□□□ -0.98
SPCS3-202ENST00000507001 C1orf53Q5VUE5 145 aa8.96□□□□□ -0.98
SPCS3-202ENST00000507001 TRIM50Q86XT4 487 aa8.96□□□□□ -0.98
SPCS3-202ENST00000507001 NACC1Q96RE7 527 aa8.96□□□□□ -0.98
SPCS3-202ENST00000507001 PPP1R12CQ9BZL4 782 aa8.96□□□□□ -0.98
SPCS3-202ENST00000507001 USP17L5A8MUK1 530 aa8.95□□□□□ -0.98
SPCS3-202ENST00000507001 M0R082 166 aa8.95□□□□□ -0.98
SPCS3-202ENST00000507001 APBA3O96018 575 aa8.95□□□□□ -0.98
SPCS3-202ENST00000507001 NEUROD1Q13562 356 aa8.95□□□□□ -0.98
SPCS3-202ENST00000507001 CFAP70Q5T0N1 1121 aa8.95□□□□□ -0.98
SPCS3-202ENST00000507001 ZNF417Q8TAU3 575 aa8.95□□□□□ -0.98
SPCS3-202ENST00000507001 ZNF587Q96SQ5 575 aaPredicted RBP8.95□□□□□ -0.98
SPCS3-202ENST00000507001 NEUROD4Q9HD90 331 aa8.95□□□□□ -0.98
SPCS3-202ENST00000507001 ZNF232Q9UNY5 417 aa8.95□□□□□ -0.98
SPCS3-202ENST00000507001 STARD13Q9Y3M8 1113 aa8.95□□□□□ -0.98
SPCS3-202ENST00000507001 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.94□□□□□ -0.98
SPCS3-202ENST00000507001 PALM3A6NDB9 673 aaPredicted RBP8.94□□□□□ -0.98
SPCS3-202ENST00000507001 PSMA6P60900 246 aaKnown RBP8.94□□□□□ -0.98
SPCS3-202ENST00000507001 SFSWAPQ12872 951 aaKnown RBP8.94□□□□□ -0.98
SPCS3-202ENST00000507001 ZMYM1Q5SVZ6 1142 aa8.94□□□□□ -0.98
SPCS3-202ENST00000507001 PLEKHM2Q8IWE5 1019 aa8.94□□□□□ -0.98
SPCS3-202ENST00000507001 MICALL1Q8N3F8 863 aa8.94□□□□□ -0.98
SPCS3-202ENST00000507001 RHPN1Q8TCX5 695 aa8.94□□□□□ -0.98
SPCS3-202ENST00000507001 SLC30A3Q99726 388 aa8.94□□□□□ -0.98
SPCS3-202ENST00000507001 ANKIB1Q9P2G1 1089 aa8.94□□□□□ -0.98
SPCS3-202ENST00000507001 TFIP11Q9UBB9 837 aaKnown RBP8.94□□□□□ -0.98
SPCS3-202ENST00000507001 M0R2N6 131 aa8.93□□□□□ -0.98
SPCS3-202ENST00000507001 NID1P14543 1247 aa8.93□□□□□ -0.98
SPCS3-202ENST00000507001 SPEM2Q0P670 501 aa8.93□□□□□ -0.98
SPCS3-202ENST00000507001 TNS4Q8IZW8 715 aa8.93□□□□□ -0.98
SPCS3-202ENST00000507001 ALBP02768 609 aa8.92□□□□□ -0.98
SPCS3-202ENST00000507001 ADH7P40394 386 aa8.92□□□□□ -0.98
SPCS3-202ENST00000507001 ATP1A2P50993 1020 aa8.92□□□□□ -0.98
SPCS3-202ENST00000507001 TPSG1Q9NRR2 321 aa8.92□□□□□ -0.98
SPCS3-202ENST00000507001 MAFBQ9Y5Q3 323 aaPredicted RBP8.92□□□□□ -0.98
SPCS3-202ENST00000507001 USP17L3A6NCW0 530 aa8.91□□□□□ -0.98
SPCS3-202ENST00000507001 USP17L4A6NCW7 530 aa8.91□□□□□ -0.98
SPCS3-202ENST00000507001 PPP1R15AO75807 674 aaPredicted RBP8.91□□□□□ -0.98
SPCS3-202ENST00000507001 TRIM28Q13263 835 aaKnown RBP8.91□□□□□ -0.98
SPCS3-202ENST00000507001 USP17L2Q6R6M4 530 aa8.91□□□□□ -0.98
SPCS3-202ENST00000507001 C20orf204Q6ZNR8 217 aa8.91□□□□□ -0.98
SPCS3-202ENST00000507001 USP17L1Q7RTZ2 530 aa8.91□□□□□ -0.98
SPCS3-202ENST00000507001 PSMG3-AS1Q96PY0 264 aa8.91□□□□□ -0.98
SPCS3-202ENST00000507001 TRAIPQ9BWF2 469 aa8.91□□□□□ -0.98
SPCS3-202ENST00000507001 BRD7Q9NPI1 651 aa8.91□□□□□ -0.98
SPCS3-202ENST00000507001 CHMP3Q9Y3E7 222 aa8.91□□□□□ -0.98
SPCS3-202ENST00000507001 ZBTB7BO15156 539 aaPredicted RBP8.9□□□□□ -0.98
SPCS3-202ENST00000507001 DYRK3O43781 588 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms