RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 NUP98P52948 1817 aa12.52□□□□□ -0.41
SFXN1-205ENST00000506963 MAP3K15Q6ZN16 1313 aa12.52□□□□□ -0.41
SFXN1-205ENST00000506963 ANXA1P04083 346 aa12.51□□□□□ -0.41
SFXN1-205ENST00000506963 POLD1P28340 1107 aa12.51□□□□□ -0.41
SFXN1-205ENST00000506963 KIF6Q6ZMV9 814 aa12.51□□□□□ -0.41
SFXN1-205ENST00000506963 TTLL7Q6ZT98 887 aa12.51□□□□□ -0.41
SFXN1-205ENST00000506963 COPS6Q7L5N1 327 aa12.51□□□□□ -0.41
SFXN1-205ENST00000506963 NECTIN2Q92692 538 aa12.51□□□□□ -0.41
SFXN1-205ENST00000506963 STK31Q9BXU1 1019 aa12.51□□□□□ -0.41
SFXN1-205ENST00000506963 ATF5Q9Y2D1 282 aaPredicted RBP12.51□□□□□ -0.41
SFXN1-205ENST00000506963 ZNF652Q9Y2D9 606 aa12.51□□□□□ -0.41
SFXN1-205ENST00000506963 ATP10DQ9P241 1426 aa12.51□□□□□ -0.41
SFXN1-205ENST00000506963 NRXN2Q9P2S2 1712 aa12.51□□□□□ -0.41
SFXN1-205ENST00000506963 MSL1Q68DK7 614 aa12.5□□□□□ -0.41
SFXN1-205ENST00000506963 GIGYF2Q6Y7W6 1299 aaKnown RBP12.5□□□□□ -0.41
SFXN1-205ENST00000506963 XAGE3Q8WTP9 111 aa12.5□□□□□ -0.41
SFXN1-205ENST00000506963 MMP10P09238 476 aa12.49□□□□□ -0.41
SFXN1-205ENST00000506963 NFIXQ14938 502 aa12.49□□□□□ -0.41
SFXN1-205ENST00000506963 ALDH1L2Q3SY69 923 aa12.49□□□□□ -0.41
SFXN1-205ENST00000506963 PLBD2Q8NHP8 589 aa12.49□□□□□ -0.41
SFXN1-205ENST00000506963 ANKRD36CQ5JPF3 1778 aa12.48□□□□□ -0.41
SFXN1-205ENST00000506963 POLRMTO00411 1230 aaKnown RBP12.48□□□□□ -0.41
SFXN1-205ENST00000506963 SLC4A2P04920 1241 aa12.48□□□□□ -0.41
SFXN1-205ENST00000506963 BRPF1P55201 1214 aaPredicted RBP12.48□□□□□ -0.41
SFXN1-205ENST00000506963 DDR1Q08345 913 aa12.48□□□□□ -0.41
SFXN1-205ENST00000506963 HLFQ16534 295 aa12.48□□□□□ -0.41
SFXN1-205ENST00000506963 HSP90AB3PQ58FF7 597 aa12.48□□□□□ -0.41
SFXN1-205ENST00000506963 TBC1D9BQ66K14 1250 aa12.48□□□□□ -0.41
SFXN1-205ENST00000506963 ANKRD13DQ6ZTN6 518 aa12.48□□□□□ -0.41
SFXN1-205ENST00000506963 ARXQ96QS3 562 aa12.48□□□□□ -0.41
SFXN1-205ENST00000506963 PHAXQ9H814 394 aaKnown RBP12.48□□□□□ -0.41
SFXN1-205ENST00000506963 KIF13BQ9NQT8 1826 aa12.48□□□□□ -0.41
SFXN1-205ENST00000506963 ARFGEF2Q9Y6D5 1785 aa12.48□□□□□ -0.41
SFXN1-205ENST00000506963 CARMIL3Q8ND23 1372 aa12.47□□□□□ -0.41
SFXN1-205ENST00000506963 IBTKQ9P2D0 1353 aaPredicted RBP12.47□□□□□ -0.41
SFXN1-205ENST00000506963 AFDNP55196 1824 aaKnown RBP12.47□□□□□ -0.41
SFXN1-205ENST00000506963 ZNF34Q8IZ26 560 aa12.47□□□□□ -0.41
SFXN1-205ENST00000506963 ZBTB3Q9H5J0 574 aa12.47□□□□□ -0.41
SFXN1-205ENST00000506963 C10orf71Q711Q0 1435 aa12.46□□□□□ -0.41
SFXN1-205ENST00000506963 DDX58O95786 925 aaKnown RBP12.46□□□□□ -0.41
SFXN1-205ENST00000506963 AIMP1Q12904 312 aaKnown RBP12.46□□□□□ -0.41
SFXN1-205ENST00000506963 FLIIQ13045 1269 aa12.46□□□□□ -0.41
SFXN1-205ENST00000506963 TRIM28Q13263 835 aaKnown RBP12.46□□□□□ -0.41
SFXN1-205ENST00000506963 TCIRG1Q13488 830 aa12.46□□□□□ -0.41
SFXN1-205ENST00000506963 KSR2Q6VAB6 950 aa12.46□□□□□ -0.41
SFXN1-205ENST00000506963 G2E3Q7L622 706 aa12.46□□□□□ -0.41
SFXN1-205ENST00000506963 SSH1Q8WYL5 1049 aa12.46□□□□□ -0.41
SFXN1-205ENST00000506963 SETDB2Q96T68 719 aa12.46□□□□□ -0.41
SFXN1-205ENST00000506963 PARP3Q9Y6F1 533 aa12.46□□□□□ -0.41
SFXN1-205ENST00000506963 ADCY9O60503 1353 aa12.45□□□□□ -0.42
SFXN1-205ENST00000506963 TCERG1O14776 1098 aaKnown RBP12.45□□□□□ -0.42
SFXN1-205ENST00000506963 PARP10Q53GL7 1025 aa12.45□□□□□ -0.42
SFXN1-205ENST00000506963 MRPL50Q8N5N7 158 aaKnown RBP12.45□□□□□ -0.42
SFXN1-205ENST00000506963 NIP7Q9Y221 180 aaKnown RBP eCLIP12.45□□□□□ -0.42
SFXN1-205ENST00000506963 CD2APQ9Y5K6 639 aa12.45□□□□□ -0.42
SFXN1-205ENST00000506963 RNF123Q5XPI4 1314 aa12.44□□□□□ -0.42
SFXN1-205ENST00000506963 SERPINB2P05120 415 aa12.44□□□□□ -0.42
SFXN1-205ENST00000506963 RARSP54136 660 aaKnown RBP12.44□□□□□ -0.42
SFXN1-205ENST00000506963 ISCA1Q9BUE6 129 aa12.44□□□□□ -0.42
SFXN1-205ENST00000506963 PTPRCP08575 1304 aa12.43□□□□□ -0.42
SFXN1-205ENST00000506963 UBN2Q6ZU65 1347 aa12.43□□□□□ -0.42
SFXN1-205ENST00000506963 PI4KAP2A4QPH2 592 aa12.43□□□□□ -0.42
SFXN1-205ENST00000506963 BICDL1Q6ZP65 573 aa12.43□□□□□ -0.42
SFXN1-205ENST00000506963 RIC3Q7Z5B4 369 aa12.43□□□□□ -0.42
SFXN1-205ENST00000506963 PI4KAP1Q8N8J0 262 aa12.43□□□□□ -0.42
SFXN1-205ENST00000506963 METTL22Q9BUU2 404 aaPredicted RBP12.43□□□□□ -0.42
SFXN1-205ENST00000506963 PPP1R1BQ9UD71 204 aaPredicted RBP12.43□□□□□ -0.42
SFXN1-205ENST00000506963 RIC1Q4ADV7 1423 aa12.43□□□□□ -0.42
SFXN1-205ENST00000506963 FKBP5Q13451 457 aaPredicted RBP12.42□□□□□ -0.42
SFXN1-205ENST00000506963 PRR5LQ6MZQ0 368 aa12.42□□□□□ -0.42
SFXN1-205ENST00000506963 TPTE2Q6XPS3 522 aa12.42□□□□□ -0.42
SFXN1-205ENST00000506963 NLRP10Q86W26 655 aa12.42□□□□□ -0.42
SFXN1-205ENST00000506963 NYXQ9GZU5 481 aa12.42□□□□□ -0.42
SFXN1-205ENST00000506963 MAP3K2Q9Y2U5 619 aa12.42□□□□□ -0.42
SFXN1-205ENST00000506963 KIAA1551Q9HCM1 1747 aa12.42□□□□□ -0.42
SFXN1-205ENST00000506963 NTSR2O95665 410 aa12.41□□□□□ -0.42
SFXN1-205ENST00000506963 SUSD4Q5VX71 490 aa12.41□□□□□ -0.42
SFXN1-205ENST00000506963 PPP1R42Q7Z4L9 355 aa12.41□□□□□ -0.42
SFXN1-205ENST00000506963 NBPF5PQ86XG9 351 aaPredicted RBP12.41□□□□□ -0.42
SFXN1-205ENST00000506963 ANKRD31Q8N7Z5 1873 aa12.41□□□□□ -0.42
SFXN1-205ENST00000506963 CNBD1Q8NA66 436 aa12.41□□□□□ -0.42
SFXN1-205ENST00000506963 CCDC191Q8NCU4 936 aa12.41□□□□□ -0.42
SFXN1-205ENST00000506963 DNAAF4Q8WXU2 420 aa12.41□□□□□ -0.42
SFXN1-205ENST00000506963 ARHGAP45Q92619 1136 aa12.41□□□□□ -0.42
SFXN1-205ENST00000506963 SYT17Q9BSW7 474 aa12.41□□□□□ -0.42
SFXN1-205ENST00000506963 FHDC1Q9C0D6 1143 aaPredicted RBP12.41□□□□□ -0.42
SFXN1-205ENST00000506963 SMC4Q9NTJ3 1288 aa12.41□□□□□ -0.42
SFXN1-205ENST00000506963 PXDNLA1KZ92 1463 aa12.4□□□□□ -0.42
SFXN1-205ENST00000506963 KIF16BQ96L93 1317 aa12.4□□□□□ -0.42
SFXN1-205ENST00000506963 KLRG2A4D1S0 409 aaPredicted RBP12.4□□□□□ -0.42
SFXN1-205ENST00000506963 GPTP24298 496 aa12.4□□□□□ -0.42
SFXN1-205ENST00000506963 TGFB2P61812 414 aa12.4□□□□□ -0.42
SFXN1-205ENST00000506963 SLC10A5Q5PT55 438 aa12.4□□□□□ -0.42
SFXN1-205ENST00000506963 BRIP1Q9BX63 1249 aa12.4□□□□□ -0.42
SFXN1-205ENST00000506963 PDZRN3Q9UPQ7 1066 aa12.4□□□□□ -0.42
SFXN1-205ENST00000506963 N4BP2Q86UW6 1770 aaPredicted RBP12.39□□□□□ -0.43
SFXN1-205ENST00000506963 DLEC1Q9Y238 1755 aa12.39□□□□□ -0.43
SFXN1-205ENST00000506963 IGKV5-2P06315 115 aa12.39□□□□□ -0.43
SFXN1-205ENST00000506963 NEXNQ0ZGT2 675 aa12.39□□□□□ -0.43
SFXN1-205ENST00000506963 LINS1Q8NG48 757 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms