RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 SRGNP10124 158 aa15.1■□□□□ 0.01
CCHCR1-220ENST00000506831 ERFEQ4G0M1 354 aa15.1■□□□□ 0.01
CCHCR1-220ENST00000506831 MASTLQ96GX5 879 aa15.1■□□□□ 0.01
CCHCR1-220ENST00000506831 USP16Q9Y5T5 823 aa15.1■□□□□ 0.01
CCHCR1-220ENST00000506831 KCNQ3O43525 872 aa15.09■□□□□ 0.01
CCHCR1-220ENST00000506831 SNRPA1P09661 255 aaKnown RBP15.09■□□□□ 0.01
CCHCR1-220ENST00000506831 RTF1Q92541 710 aaKnown RBP15.09■□□□□ 0.01
CCHCR1-220ENST00000506831 TAOK3Q9H2K8 898 aa15.09■□□□□ 0.01
CCHCR1-220ENST00000506831 COL11A2P13942 1736 aaPredicted RBP15.09■□□□□ 0.01
CCHCR1-220ENST00000506831 BCORQ6W2J9 1755 aa15.08■□□□□ 0.01
CCHCR1-220ENST00000506831 NPHP1O15259 732 aa15.08■□□□□ 0
CCHCR1-220ENST00000506831 DDX10Q13206 875 aaKnown RBP15.08■□□□□ 0
CCHCR1-220ENST00000506831 CNGB1Q14028 1251 aaPredicted RBP15.08■□□□□ 0
CCHCR1-220ENST00000506831 ZNF652Q9Y2D9 606 aa15.08■□□□□ 0
CCHCR1-220ENST00000506831 ARFGEF2Q9Y6D5 1785 aa15.07■□□□□ 0
CCHCR1-220ENST00000506831 KLRG2A4D1S0 409 aaPredicted RBP15.07■□□□□ 0
CCHCR1-220ENST00000506831 U2AF1L5P0DN76 240 aaPredicted RBP15.07■□□□□ 0
CCHCR1-220ENST00000506831 U2AF1Q01081 240 aaKnown RBP eCLIP15.07■□□□□ 0
CCHCR1-220ENST00000506831 PRPF40BQ6NWY9 871 aaKnown RBP15.07■□□□□ 0
CCHCR1-220ENST00000506831 CCDC24Q8N4L8 307 aa15.07■□□□□ 0
CCHCR1-220ENST00000506831 SLX4Q8IY92 1834 aa15.07■□□□□ 0
CCHCR1-220ENST00000506831 C7orf43Q8WVR3 580 aa15.06■□□□□ 0
CCHCR1-220ENST00000506831 PPP2R1AP30153 589 aa15.05■□□□□ -0
CCHCR1-220ENST00000506831 TPTE2Q6XPS3 522 aa15.05■□□□□ -0
CCHCR1-220ENST00000506831 NBPF5PQ86XG9 351 aaPredicted RBP15.05■□□□□ -0
CCHCR1-220ENST00000506831 ZNF219Q9P2Y4 722 aaPredicted RBP15.05■□□□□ -0
CCHCR1-220ENST00000506831 PRAMEF22A3QJZ6 481 aa15.04■□□□□ -0
CCHCR1-220ENST00000506831 NPR1P16066 1061 aa15.04■□□□□ -0
CCHCR1-220ENST00000506831 MCM10Q7L590 875 aa15.04■□□□□ -0
CCHCR1-220ENST00000506831 TAF7Q15545 349 aaPredicted RBP15.03■□□□□ -0
CCHCR1-220ENST00000506831 CCDC93Q567U6 631 aa15.03■□□□□ -0
CCHCR1-220ENST00000506831 COL13A1Q5TAT6 717 aaPredicted RBP15.03■□□□□ -0
CCHCR1-220ENST00000506831 CHADLQ6NUI6 762 aa15.03■□□□□ -0
CCHCR1-220ENST00000506831 CACNA1SQ13698 1873 aa15.03■□□□□ -0
CCHCR1-220ENST00000506831 IQCA1LA6NCM1 817 aa15.02■□□□□ -0
CCHCR1-220ENST00000506831 NBPF26B4DH59 902 aa15.02■□□□□ -0
CCHCR1-220ENST00000506831 DDNO94850 711 aaPredicted RBP15.02■□□□□ -0
CCHCR1-220ENST00000506831 PIP4K2AP48426 406 aaPredicted RBP15.02■□□□□ -0
CCHCR1-220ENST00000506831 NBPF10Q6P3W6 841 aaKnown RBP15.02■□□□□ -0
CCHCR1-220ENST00000506831 NBPF15Q8N660 670 aa15.02■□□□□ -0
CCHCR1-220ENST00000506831 L3MBTL3Q96JM7 780 aaPredicted RBP15.02■□□□□ -0
CCHCR1-220ENST00000506831 NIP7Q9Y221 180 aaKnown RBP eCLIP15.02■□□□□ -0
CCHCR1-220ENST00000506831 SCN4AP35499 1836 aa15.01□□□□□ -0.01
CCHCR1-220ENST00000506831 FKBP4Q02790 459 aaKnown RBP eCLIP15.01□□□□□ -0.01
CCHCR1-220ENST00000506831 RTKN2Q8IZC4 609 aa15.01□□□□□ -0.01
CCHCR1-220ENST00000506831 PNISRQ8TF01 805 aaKnown RBP15.01□□□□□ -0.01
CCHCR1-220ENST00000506831 CREBZFQ9NS37 354 aa15.01□□□□□ -0.01
CCHCR1-220ENST00000506831 ALDH1B1P30837 517 aa15□□□□□ -0.01
CCHCR1-220ENST00000506831 DCTN1Q14203 1278 aa15□□□□□ -0.01
CCHCR1-220ENST00000506831 ERVV-1B6SEH8 477 aa14.99□□□□□ -0.01
CCHCR1-220ENST00000506831 NEFMP07197 916 aa14.99□□□□□ -0.01
CCHCR1-220ENST00000506831 HSPA1AP0DMV8 641 aaKnown RBP14.99□□□□□ -0.01
CCHCR1-220ENST00000506831 HSPA1BP0DMV9 641 aaKnown RBP14.99□□□□□ -0.01
CCHCR1-220ENST00000506831 LDHDQ86WU2 507 aa14.99□□□□□ -0.01
CCHCR1-220ENST00000506831 TNS4Q8IZW8 715 aa14.98□□□□□ -0.01
CCHCR1-220ENST00000506831 NYXQ9GZU5 481 aa14.98□□□□□ -0.01
CCHCR1-220ENST00000506831 TAF1DQ9H5J8 278 aaPredicted RBP14.98□□□□□ -0.01
CCHCR1-220ENST00000506831 GTF2E1P29083 439 aaPredicted RBP14.97□□□□□ -0.01
CCHCR1-220ENST00000506831 HLFQ16534 295 aa14.97□□□□□ -0.01
CCHCR1-220ENST00000506831 CRY2Q49AN0 593 aa14.97□□□□□ -0.01
CCHCR1-220ENST00000506831 LAMB4A4D0S4 1761 aa14.97□□□□□ -0.01
CCHCR1-220ENST00000506831 PASKQ96RG2 1323 aa14.96□□□□□ -0.01
CCHCR1-220ENST00000506831 POTEIP0CG38 1075 aa14.96□□□□□ -0.01
CCHCR1-220ENST00000506831 POTEJP0CG39 1038 aa14.96□□□□□ -0.01
CCHCR1-220ENST00000506831 GRIPAP1Q4V328 841 aa14.96□□□□□ -0.01
CCHCR1-220ENST00000506831 CC2D2BQ6DHV5 1058 aa14.96□□□□□ -0.01
CCHCR1-220ENST00000506831 NUP98P52948 1817 aa14.95□□□□□ -0.02
CCHCR1-220ENST00000506831 FZD9O00144 591 aa14.95□□□□□ -0.02
CCHCR1-220ENST00000506831 EIF4A1P60842 406 aaKnown RBP14.95□□□□□ -0.02
CCHCR1-220ENST00000506831 PLEKHF1Q96S99 279 aa14.95□□□□□ -0.02
CCHCR1-220ENST00000506831 PSMD1Q99460 953 aa14.95□□□□□ -0.02
CCHCR1-220ENST00000506831 PNNQ9H307 717 aaKnown RBP14.95□□□□□ -0.02
CCHCR1-220ENST00000506831 ZNF277Q9NRM2 450 aaPredicted RBP14.95□□□□□ -0.02
CCHCR1-220ENST00000506831 MIS18AQ9NYP9 233 aa14.95□□□□□ -0.02
CCHCR1-220ENST00000506831 HACL1Q9UJ83 578 aa14.95□□□□□ -0.02
CCHCR1-220ENST00000506831 DLG5Q8TDM6 1919 aa14.95□□□□□ -0.02
CCHCR1-220ENST00000506831 KDM3BQ7LBC6 1761 aa14.95□□□□□ -0.02
CCHCR1-220ENST00000506831 IBTKQ9P2D0 1353 aaPredicted RBP14.95□□□□□ -0.02
CCHCR1-220ENST00000506831 MAP3K15Q6ZN16 1313 aa14.94□□□□□ -0.02
CCHCR1-220ENST00000506831 RIC1Q4ADV7 1423 aa14.94□□□□□ -0.02
CCHCR1-220ENST00000506831 FAM177BA6PVY3 158 aa14.94□□□□□ -0.02
CCHCR1-220ENST00000506831 IARSP41252 1262 aaKnown RBP14.94□□□□□ -0.02
CCHCR1-220ENST00000506831 PNMA8AQ86V59 439 aaPredicted RBP14.94□□□□□ -0.02
CCHCR1-220ENST00000506831 SYNE4Q8N205 404 aa14.94□□□□□ -0.02
CCHCR1-220ENST00000506831 ERBB4Q15303 1308 aa14.93□□□□□ -0.02
CCHCR1-220ENST00000506831 SNED1Q8TER0 1413 aa14.93□□□□□ -0.02
CCHCR1-220ENST00000506831 ITGBL1O95965 494 aaPredicted RBP14.93□□□□□ -0.02
CCHCR1-220ENST00000506831 HOXA10P31260 410 aaPredicted RBP14.93□□□□□ -0.02
CCHCR1-220ENST00000506831 GPC2Q8N158 579 aa14.93□□□□□ -0.02
CCHCR1-220ENST00000506831 MKRN1Q9UHC7 482 aaKnown RBP14.93□□□□□ -0.02
CCHCR1-220ENST00000506831 CNTNAP1P78357 1384 aa14.93□□□□□ -0.02
CCHCR1-220ENST00000506831 ZNF541Q9H0D2 1346 aa14.92□□□□□ -0.02
CCHCR1-220ENST00000506831 TMEM88BA6NKF7 163 aa14.92□□□□□ -0.02
CCHCR1-220ENST00000506831 EPHX2P34913 555 aa14.92□□□□□ -0.02
CCHCR1-220ENST00000506831 NFE2L2Q16236 605 aa14.92□□□□□ -0.02
CCHCR1-220ENST00000506831 OLFM4Q6UX06 510 aa14.92□□□□□ -0.02
CCHCR1-220ENST00000506831 KIF6Q6ZMV9 814 aa14.92□□□□□ -0.02
CCHCR1-220ENST00000506831 JDP2Q8WYK2 163 aa14.92□□□□□ -0.02
CCHCR1-220ENST00000506831 ADAMTSL1Q8N6G6 1762 aa14.91□□□□□ -0.02
CCHCR1-220ENST00000506831 ABCC12Q96J65 1359 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 200.3 ms