RNA–Protein interactions for RNA: ENST00000506611.1

TRIO-208, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-208ENST00000506611 LARP1Q6PKG0 1096 aaKnown RBP8.73□□□□□ -1.01
TRIO-208ENST00000506611 VRTNQ9H8Y1 702 aa8.73□□□□□ -1.01
TRIO-208ENST00000506611 GGA1Q9UJY5 639 aa8.73□□□□□ -1.01
TRIO-208ENST00000506611 ATAD2Q6PL18 1390 aa8.73□□□□□ -1.01
TRIO-208ENST00000506611 IRS1P35568 1242 aa8.72□□□□□ -1.01
TRIO-208ENST00000506611 MARSP56192 900 aaKnown RBP8.72□□□□□ -1.01
TRIO-208ENST00000506611 SNRPNP63162 240 aaKnown RBP8.72□□□□□ -1.01
TRIO-208ENST00000506611 CDCA8Q53HL2 280 aa8.72□□□□□ -1.01
TRIO-208ENST00000506611 ANKMY2Q8IV38 441 aa8.72□□□□□ -1.01
TRIO-208ENST00000506611 GALNT6Q8NCL4 622 aa8.72□□□□□ -1.01
TRIO-208ENST00000506611 HSH2DQ96JZ2 352 aa8.72□□□□□ -1.01
TRIO-208ENST00000506611 C2orf49Q9BVC5 232 aaPredicted RBP8.72□□□□□ -1.01
TRIO-208ENST00000506611 PHACTR1Q9C0D0 580 aa8.72□□□□□ -1.01
TRIO-208ENST00000506611 ENAMQ9NRM1 1142 aa8.72□□□□□ -1.01
TRIO-208ENST00000506611 PPP1R12BO60237 982 aaPredicted RBP8.71□□□□□ -1.02
TRIO-208ENST00000506611 FAM182BQ5T319 152 aa8.71□□□□□ -1.02
TRIO-208ENST00000506611 ZNF280CQ8ND82 737 aa8.71□□□□□ -1.02
TRIO-208ENST00000506611 NEDD1Q8NHV4 660 aa8.71□□□□□ -1.02
TRIO-208ENST00000506611 SCG3Q8WXD2 468 aaKnown RBP8.71□□□□□ -1.02
TRIO-208ENST00000506611 C1orf53Q5VUE5 145 aa8.7□□□□□ -1.02
TRIO-208ENST00000506611 SLCO4C1Q6ZQN7 724 aa8.7□□□□□ -1.02
TRIO-208ENST00000506611 STAG2Q8N3U4 1231 aa8.7□□□□□ -1.02
TRIO-208ENST00000506611 GOLGA6L1Q8N7Z2 621 aa8.7□□□□□ -1.02
TRIO-208ENST00000506611 RHPN1Q8TCX5 695 aa8.7□□□□□ -1.02
TRIO-208ENST00000506611 EDARADDQ8WWZ3 215 aa8.7□□□□□ -1.02
TRIO-208ENST00000506611 GDF2Q9UK05 429 aaPredicted RBP8.7□□□□□ -1.02
TRIO-208ENST00000506611 GJA3Q9Y6H8 435 aa8.7□□□□□ -1.02
TRIO-208ENST00000506611 NEURL1BA8MQ27 555 aa8.69□□□□□ -1.02
TRIO-208ENST00000506611 RNF225M0QZC1 329 aaPredicted RBP8.69□□□□□ -1.02
TRIO-208ENST00000506611 GDF11O95390 407 aa8.69□□□□□ -1.02
TRIO-208ENST00000506611 ARAFP10398 606 aa8.69□□□□□ -1.02
TRIO-208ENST00000506611 RFX1P22670 979 aa8.69□□□□□ -1.02
TRIO-208ENST00000506611 SRPK2P78362 688 aaKnown RBP8.69□□□□□ -1.02
TRIO-208ENST00000506611 FCHSD1Q86WN1 690 aa8.69□□□□□ -1.02
TRIO-208ENST00000506611 ALDH16A1Q8IZ83 802 aa8.69□□□□□ -1.02
TRIO-208ENST00000506611 KCTD17Q8N5Z5 321 aa8.69□□□□□ -1.02
TRIO-208ENST00000506611 SCARF2Q96GP6 870 aaPredicted RBP8.69□□□□□ -1.02
TRIO-208ENST00000506611 ZMYND15Q9H091 742 aa8.69□□□□□ -1.02
TRIO-208ENST00000506611 RBM19Q9Y4C8 960 aaKnown RBP8.69□□□□□ -1.02
TRIO-208ENST00000506611 GPC6Q9Y625 555 aaPredicted RBP8.69□□□□□ -1.02
TRIO-208ENST00000506611 DNMT3AQ9Y6K1 912 aaPredicted RBP8.69□□□□□ -1.02
TRIO-208ENST00000506611 EPXP11678 715 aa8.68□□□□□ -1.02
TRIO-208ENST00000506611 SFSWAPQ12872 951 aaKnown RBP8.68□□□□□ -1.02
TRIO-208ENST00000506611 CHMP7Q8WUX9 453 aaPredicted RBP8.68□□□□□ -1.02
TRIO-208ENST00000506611 SUSD3Q96L08 255 aa8.68□□□□□ -1.02
TRIO-208ENST00000506611 HINFPQ9BQA5 517 aa8.68□□□□□ -1.02
TRIO-208ENST00000506611 ZNF468Q5VIY5 522 aaPredicted RBP8.67□□□□□ -1.02
TRIO-208ENST00000506611 TMEM151AQ8N4L1 468 aa8.67□□□□□ -1.02
TRIO-208ENST00000506611 MARK1Q9P0L2 795 aa8.67□□□□□ -1.02
TRIO-208ENST00000506611 WEE1P30291 646 aa8.66□□□□□ -1.02
TRIO-208ENST00000506611 PCBP4P57723 403 aaKnown RBP8.66□□□□□ -1.02
TRIO-208ENST00000506611 NGLY1Q96IV0 654 aa8.66□□□□□ -1.02
TRIO-208ENST00000506611 SLC30A3Q99726 388 aa8.66□□□□□ -1.02
TRIO-208ENST00000506611 ZMIZ1Q9ULJ6 1067 aa8.66□□□□□ -1.02
TRIO-208ENST00000506611 BCS1LQ9Y276 419 aa8.66□□□□□ -1.02
TRIO-208ENST00000506611 GTF3C3Q9Y5Q9 886 aa8.66□□□□□ -1.02
TRIO-208ENST00000506611 IGFBP4P22692 258 aa8.65□□□□□ -1.02
TRIO-208ENST00000506611 TYRO3Q06418 890 aa8.65□□□□□ -1.02
TRIO-208ENST00000506611 LAMC2Q13753 1193 aa8.65□□□□□ -1.02
TRIO-208ENST00000506611 KANK3Q6NY19 840 aa8.65□□□□□ -1.02
TRIO-208ENST00000506611 MDFIQ99750 246 aa8.65□□□□□ -1.02
TRIO-208ENST00000506611 CHMP3Q9Y3E7 222 aa8.65□□□□□ -1.02
TRIO-208ENST00000506611 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.64□□□□□ -1.03
TRIO-208ENST00000506611 ITGB2P05107 769 aa8.64□□□□□ -1.03
TRIO-208ENST00000506611 ADH6P28332 368 aa8.64□□□□□ -1.03
TRIO-208ENST00000506611 LINC00114Q6XXX2 140 aa8.64□□□□□ -1.03
TRIO-208ENST00000506611 BEND7Q8N7W2 519 aaPredicted RBP8.64□□□□□ -1.03
TRIO-208ENST00000506611 BTBD6Q96KE9 485 aa8.64□□□□□ -1.03
TRIO-208ENST00000506611 AVENQ9NQS1 362 aaPredicted RBP8.64□□□□□ -1.03
TRIO-208ENST00000506611 NOVA2Q9UNW9 492 aaKnown RBP8.64□□□□□ -1.03
TRIO-208ENST00000506611 FAM69CQ0P6D2 419 aa8.63□□□□□ -1.03
TRIO-208ENST00000506611 ARID3CA6NKF2 412 aa8.62□□□□□ -1.03
TRIO-208ENST00000506611 DGKGP49619 791 aa8.62□□□□□ -1.03
TRIO-208ENST00000506611 RAB44Q7Z6P3 723 aaPredicted RBP8.62□□□□□ -1.03
TRIO-208ENST00000506611 SYT9Q86SS6 491 aa8.62□□□□□ -1.03
TRIO-208ENST00000506611 FAM200AQ8TCP9 573 aa8.62□□□□□ -1.03
TRIO-208ENST00000506611 STK32AQ8WU08 396 aa8.62□□□□□ -1.03
TRIO-208ENST00000506611 DCAF5Q96JK2 942 aa8.62□□□□□ -1.03
TRIO-208ENST00000506611 CEP63Q96MT8 703 aa8.62□□□□□ -1.03
TRIO-208ENST00000506611 QTRT2Q9H974 415 aaKnown RBP8.62□□□□□ -1.03
TRIO-208ENST00000506611 NEUROD4Q9HD90 331 aa8.62□□□□□ -1.03
TRIO-208ENST00000506611 BRD7Q9NPI1 651 aa8.62□□□□□ -1.03
TRIO-208ENST00000506611 COL8A1P27658 744 aa8.61□□□□□ -1.03
TRIO-208ENST00000506611 GRNP28799 593 aaKnown RBP8.61□□□□□ -1.03
TRIO-208ENST00000506611 KCNQ4P56696 695 aa8.61□□□□□ -1.03
TRIO-208ENST00000506611 RTN1Q16799 776 aa8.61□□□□□ -1.03
TRIO-208ENST00000506611 CHSY3Q70JA7 882 aa8.61□□□□□ -1.03
TRIO-208ENST00000506611 BTLAQ7Z6A9 289 aa8.61□□□□□ -1.03
TRIO-208ENST00000506611 SUV39H2Q9H5I1 410 aa8.61□□□□□ -1.03
TRIO-208ENST00000506611 RRAGCQ9HB90 399 aa8.61□□□□□ -1.03
TRIO-208ENST00000506611 ANKIB1Q9P2G1 1089 aa8.61□□□□□ -1.03
TRIO-208ENST00000506611 DMGDHQ9UI17 866 aaKnown RBP8.61□□□□□ -1.03
TRIO-208ENST00000506611 PRR12Q9ULL5 1215 aa8.61□□□□□ -1.03
TRIO-208ENST00000506611 PHF20L1A8MW92 1017 aa8.6□□□□□ -1.03
TRIO-208ENST00000506611 SPEM2Q0P670 501 aa8.6□□□□□ -1.03
TRIO-208ENST00000506611 PODNQ7Z5L7 613 aa8.6□□□□□ -1.03
TRIO-208ENST00000506611 AMPD1P23109 780 aa8.59□□□□□ -1.03
TRIO-208ENST00000506611 ELOAQ14241 798 aaKnown RBP8.59□□□□□ -1.03
TRIO-208ENST00000506611 KLK14Q9P0G3 267 aa8.59□□□□□ -1.03
TRIO-208ENST00000506611 FKBP5Q13451 457 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms