RNA–Protein interactions for RNA: ENST00000506437.1

ITGA3-208, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 3,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-208ENST00000506437 SIK1P57059 783 aa14.26□□□□□ -0.13
ITGA3-208ENST00000506437 ZBTB1Q9Y2K1 713 aa14.26□□□□□ -0.13
ITGA3-208ENST00000506437 CT47B1P0C2W7 299 aaPredicted RBP14.26□□□□□ -0.13
ITGA3-208ENST00000506437 PALLDQ8WX93 1383 aa14.26□□□□□ -0.13
ITGA3-208ENST00000506437 KIF16BQ96L93 1317 aa14.26□□□□□ -0.13
ITGA3-208ENST00000506437 ADAMTS7Q9UKP4 1686 aa14.25□□□□□ -0.13
ITGA3-208ENST00000506437 ATP5J2-PTCD1G3V325 749 aa14.25□□□□□ -0.13
ITGA3-208ENST00000506437 CWF19L2Q2TBE0 894 aaKnown RBP14.25□□□□□ -0.13
ITGA3-208ENST00000506437 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.25□□□□□ -0.13
ITGA3-208ENST00000506437 DBF4Q9UBU7 674 aaPredicted RBP14.25□□□□□ -0.13
ITGA3-208ENST00000506437 TBC1D2BQ9UPU7 963 aa14.25□□□□□ -0.13
ITGA3-208ENST00000506437 AMIGO3Q86WK7 504 aa14.24□□□□□ -0.13
ITGA3-208ENST00000506437 BABAM1Q9NWV8 329 aa14.24□□□□□ -0.13
ITGA3-208ENST00000506437 FAM13BQ9NYF5 915 aa14.24□□□□□ -0.13
ITGA3-208ENST00000506437 MAP3K2Q9Y2U5 619 aa14.24□□□□□ -0.13
ITGA3-208ENST00000506437 MRC1P22897 1456 aa14.24□□□□□ -0.13
ITGA3-208ENST00000506437 KCPQ6ZWJ8 1503 aa14.24□□□□□ -0.13
ITGA3-208ENST00000506437 RGS12O14924 1447 aa14.23□□□□□ -0.13
ITGA3-208ENST00000506437 IPO8O15397 1037 aaKnown RBP14.23□□□□□ -0.13
ITGA3-208ENST00000506437 L1TD1Q5T7N2 865 aaKnown RBP14.23□□□□□ -0.13
ITGA3-208ENST00000506437 THSD7AQ9UPZ6 1657 aa14.23□□□□□ -0.13
ITGA3-208ENST00000506437 FAM177BA6PVY3 158 aa14.23□□□□□ -0.13
ITGA3-208ENST00000506437 PHF14O94880 888 aa14.23□□□□□ -0.13
ITGA3-208ENST00000506437 MVPQ14764 893 aaKnown RBP14.23□□□□□ -0.13
ITGA3-208ENST00000506437 MEIS3Q99687 375 aa14.23□□□□□ -0.13
ITGA3-208ENST00000506437 RIC3Q7Z5B4 369 aa14.22□□□□□ -0.13
ITGA3-208ENST00000506437 PCDHB15Q9Y5E8 787 aa14.22□□□□□ -0.13
ITGA3-208ENST00000506437 MAPK8IP2Q13387 824 aaPredicted RBP14.22□□□□□ -0.13
ITGA3-208ENST00000506437 KIAA1211Q6ZU35 1233 aa14.22□□□□□ -0.13
ITGA3-208ENST00000506437 LINC00116Q8NCU8 138 aa14.22□□□□□ -0.13
ITGA3-208ENST00000506437 ZNF830Q96NB3 372 aaPredicted RBP14.22□□□□□ -0.13
ITGA3-208ENST00000506437 DDX21Q9NR30 783 aaKnown RBP eCLIP14.22□□□□□ -0.13
ITGA3-208ENST00000506437 LRRC4BQ9NT99 713 aa14.22□□□□□ -0.13
ITGA3-208ENST00000506437 SLKQ9H2G2 1235 aaPredicted RBP14.21□□□□□ -0.13
ITGA3-208ENST00000506437 CYP19A1P11511 503 aaPredicted RBP14.21□□□□□ -0.13
ITGA3-208ENST00000506437 CRKLP46109 303 aaKnown RBP14.21□□□□□ -0.13
ITGA3-208ENST00000506437 CCNL1Q9UK58 526 aaPredicted RBP14.21□□□□□ -0.13
ITGA3-208ENST00000506437 ESPNB1AK53 854 aa14.21□□□□□ -0.14
ITGA3-208ENST00000506437 APBA3O96018 575 aa14.21□□□□□ -0.14
ITGA3-208ENST00000506437 PDE3AQ14432 1141 aa14.21□□□□□ -0.14
ITGA3-208ENST00000506437 MYD88Q99836 296 aa14.2□□□□□ -0.14
ITGA3-208ENST00000506437 GPTP24298 496 aa14.2□□□□□ -0.14
ITGA3-208ENST00000506437 FAM196AQ6ZSG2 479 aa14.2□□□□□ -0.14
ITGA3-208ENST00000506437 DHX37Q8IY37 1157 aaKnown RBP14.2□□□□□ -0.14
ITGA3-208ENST00000506437 ADCY9O60503 1353 aa14.2□□□□□ -0.14
ITGA3-208ENST00000506437 IGHDP01880 384 aa14.19□□□□□ -0.14
ITGA3-208ENST00000506437 LRP10Q7Z4F1 713 aa14.19□□□□□ -0.14
ITGA3-208ENST00000506437 IPO4Q8TEX9 1081 aaKnown RBP14.19□□□□□ -0.14
ITGA3-208ENST00000506437 APBB1O00213 710 aa14.19□□□□□ -0.14
ITGA3-208ENST00000506437 STARD3NLO95772 234 aa14.19□□□□□ -0.14
ITGA3-208ENST00000506437 MS4A1P11836 297 aa14.19□□□□□ -0.14
ITGA3-208ENST00000506437 API5Q9BZZ5 524 aaKnown RBP14.19□□□□□ -0.14
ITGA3-208ENST00000506437 HLFQ16534 295 aa14.18□□□□□ -0.14
ITGA3-208ENST00000506437 DEFB132Q7Z7B7 95 aa14.18□□□□□ -0.14
ITGA3-208ENST00000506437 NBPF7P0C2Y1 421 aaPredicted RBP14.18□□□□□ -0.14
ITGA3-208ENST00000506437 ANKRD13DQ6ZTN6 518 aa14.18□□□□□ -0.14
ITGA3-208ENST00000506437 DNAAF4Q8WXU2 420 aa14.18□□□□□ -0.14
ITGA3-208ENST00000506437 BTAF1O14981 1849 aa14.18□□□□□ -0.14
ITGA3-208ENST00000506437 MYH14Q7Z406 1995 aaKnown RBP14.18□□□□□ -0.14
ITGA3-208ENST00000506437 GOLGA6L3A6NEY3 463 aa14.18□□□□□ -0.14
ITGA3-208ENST00000506437 TPM2P07951 284 aa14.18□□□□□ -0.14
ITGA3-208ENST00000506437 HOXB7P09629 217 aa14.18□□□□□ -0.14
ITGA3-208ENST00000506437 SYNE4Q8N205 404 aa14.18□□□□□ -0.14
ITGA3-208ENST00000506437 HYPKQ9NX55 129 aa14.18□□□□□ -0.14
ITGA3-208ENST00000506437 ABCC4O15439 1325 aa14.18□□□□□ -0.14
ITGA3-208ENST00000506437 INTS5Q6P9B9 1019 aaKnown RBP14.17□□□□□ -0.14
ITGA3-208ENST00000506437 BICDL1Q6ZP65 573 aa14.17□□□□□ -0.14
ITGA3-208ENST00000506437 PROM2Q8N271 834 aa14.17□□□□□ -0.14
ITGA3-208ENST00000506437 ZBTB7BO15156 539 aaPredicted RBP14.17□□□□□ -0.14
ITGA3-208ENST00000506437 EN1Q05925 392 aaPredicted RBP14.17□□□□□ -0.14
ITGA3-208ENST00000506437 GNPATO15228 680 aa14.16□□□□□ -0.14
ITGA3-208ENST00000506437 CCDC24Q8N4L8 307 aa14.16□□□□□ -0.14
ITGA3-208ENST00000506437 CCDC85AQ96PX6 553 aaPredicted RBP14.16□□□□□ -0.14
ITGA3-208ENST00000506437 PTPRCP08575 1304 aa14.16□□□□□ -0.14
ITGA3-208ENST00000506437 KSR2Q6VAB6 950 aa14.16□□□□□ -0.14
ITGA3-208ENST00000506437 TMEM51Q9NW97 253 aa14.16□□□□□ -0.14
ITGA3-208ENST00000506437 SRP68Q9UHB9 627 aaKnown RBP14.16□□□□□ -0.14
ITGA3-208ENST00000506437 SBF2Q86WG5 1849 aa14.15□□□□□ -0.14
ITGA3-208ENST00000506437 UBR2Q8IWV8 1755 aa14.15□□□□□ -0.14
ITGA3-208ENST00000506437 IGKV5-2P06315 115 aa14.15□□□□□ -0.14
ITGA3-208ENST00000506437 BRPF1P55201 1214 aaPredicted RBP14.15□□□□□ -0.14
ITGA3-208ENST00000506437 ZBTB22O15209 634 aa14.15□□□□□ -0.14
ITGA3-208ENST00000506437 ARHGAP45Q92619 1136 aa14.15□□□□□ -0.14
ITGA3-208ENST00000506437 DDX19BQ9UMR2 479 aa14.15□□□□□ -0.14
ITGA3-208ENST00000506437 PLEKHG2Q9H7P9 1386 aa14.15□□□□□ -0.15
ITGA3-208ENST00000506437 BEND3Q5T5X7 828 aa14.14□□□□□ -0.15
ITGA3-208ENST00000506437 CCDC87Q9NVE4 849 aa14.14□□□□□ -0.15
ITGA3-208ENST00000506437 SRCIN1Q9C0H9 1055 aa14.14□□□□□ -0.15
ITGA3-208ENST00000506437 USP44Q9H0E7 712 aa14.14□□□□□ -0.15
ITGA3-208ENST00000506437 ZBTB40Q9NUA8 1239 aa14.14□□□□□ -0.15
ITGA3-208ENST00000506437 PAPPAQ13219 1627 aa14.14□□□□□ -0.15
ITGA3-208ENST00000506437 DZIP3Q86Y13 1208 aaKnown RBP14.13□□□□□ -0.15
ITGA3-208ENST00000506437 SMARCC1Q92922 1105 aaPredicted RBP14.13□□□□□ -0.15
ITGA3-208ENST00000506437 LRRFIP2Q9Y608 721 aaKnown RBP14.13□□□□□ -0.15
ITGA3-208ENST00000506437 EZH2Q15910 746 aaKnown RBP14.13□□□□□ -0.15
ITGA3-208ENST00000506437 TXNRD1Q16881 649 aa14.13□□□□□ -0.15
ITGA3-208ENST00000506437 INTS3Q68E01 1043 aaKnown RBP14.13□□□□□ -0.15
ITGA3-208ENST00000506437 C9orf78Q9NZ63 289 aaPredicted RBP14.13□□□□□ -0.15
ITGA3-208ENST00000506437 ZFP91Q96JP5 570 aaPredicted RBP14.12□□□□□ -0.15
ITGA3-208ENST00000506437 DDX58O95786 925 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms