RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 PANK1Q8TE04 598 aa7.68□□□□□ -1.18
SCLT1-207ENST00000506233 SSH1Q8WYL5 1049 aa7.68□□□□□ -1.18
SCLT1-207ENST00000506233 AKT1S1Q96B36 256 aa7.68□□□□□ -1.18
SCLT1-207ENST00000506233 MEGF6O75095 1541 aa7.68□□□□□ -1.18
SCLT1-207ENST00000506233 A0A1B0GUL6 1792 aa7.68□□□□□ -1.18
SCLT1-207ENST00000506233 NCOA3Q9Y6Q9 1424 aa7.68□□□□□ -1.18
SCLT1-207ENST00000506233 KIF24Q5T7B8 1368 aa7.68□□□□□ -1.18
SCLT1-207ENST00000506233 ABCC4O15439 1325 aa7.68□□□□□ -1.18
SCLT1-207ENST00000506233 TRIM27P14373 513 aa7.68□□□□□ -1.18
SCLT1-207ENST00000506233 SERPINB4P48594 390 aa7.68□□□□□ -1.18
SCLT1-207ENST00000506233 RIC3Q7Z5B4 369 aa7.68□□□□□ -1.18
SCLT1-207ENST00000506233 MBIPQ9NS73 344 aa7.68□□□□□ -1.18
SCLT1-207ENST00000506233 MAFBQ9Y5Q3 323 aaPredicted RBP7.68□□□□□ -1.18
SCLT1-207ENST00000506233 KDM6AO15550 1401 aaPredicted RBP7.68□□□□□ -1.18
SCLT1-207ENST00000506233 RECKO95980 971 aa7.67□□□□□ -1.18
SCLT1-207ENST00000506233 C7P10643 843 aa7.67□□□□□ -1.18
SCLT1-207ENST00000506233 KIF3CO14782 793 aa7.67□□□□□ -1.18
SCLT1-207ENST00000506233 MRPL50Q8N5N7 158 aaKnown RBP7.67□□□□□ -1.18
SCLT1-207ENST00000506233 ORAI2Q96SN7 254 aa7.67□□□□□ -1.18
SCLT1-207ENST00000506233 EYA1Q99502 592 aa7.67□□□□□ -1.18
SCLT1-207ENST00000506233 ROBO1Q9Y6N7 1651 aa7.67□□□□□ -1.18
SCLT1-207ENST00000506233 DCTN1Q14203 1278 aa7.67□□□□□ -1.18
SCLT1-207ENST00000506233 LRP10Q7Z4F1 713 aa7.67□□□□□ -1.18
SCLT1-207ENST00000506233 SPIRE2Q8WWL2 714 aa7.67□□□□□ -1.18
SCLT1-207ENST00000506233 TRIM34Q9BYJ4 488 aa7.67□□□□□ -1.18
SCLT1-207ENST00000506233 TERF2IPQ9NYB0 399 aa7.67□□□□□ -1.18
SCLT1-207ENST00000506233 BRPF3Q9ULD4 1205 aa7.67□□□□□ -1.18
SCLT1-207ENST00000506233 TTC21AQ8NDW8 1320 aa7.67□□□□□ -1.18
SCLT1-207ENST00000506233 HOXC9P31274 260 aa7.66□□□□□ -1.18
SCLT1-207ENST00000506233 PRKAR2BP31323 418 aa7.66□□□□□ -1.18
SCLT1-207ENST00000506233 MICALL2Q8IY33 904 aa7.66□□□□□ -1.18
SCLT1-207ENST00000506233 PMFBP1Q8TBY8 1022 aa7.66□□□□□ -1.18
SCLT1-207ENST00000506233 EPS8L1Q8TE68 723 aa7.66□□□□□ -1.18
SCLT1-207ENST00000506233 BACH2Q9BYV9 841 aa7.66□□□□□ -1.18
SCLT1-207ENST00000506233 POGKQ9P215 609 aa7.66□□□□□ -1.18
SCLT1-207ENST00000506233 CHL1O00533 1208 aa7.66□□□□□ -1.18
SCLT1-207ENST00000506233 PAK3O75914 559 aaPredicted RBP7.66□□□□□ -1.18
SCLT1-207ENST00000506233 THEMISQ8N1K5 641 aaPredicted RBP7.66□□□□□ -1.18
SCLT1-207ENST00000506233 RTL1A6NKG5 1358 aa7.66□□□□□ -1.18
SCLT1-207ENST00000506233 HMOX1P09601 288 aa7.66□□□□□ -1.18
SCLT1-207ENST00000506233 EXOSC9Q06265 439 aaKnown RBP7.66□□□□□ -1.18
SCLT1-207ENST00000506233 TBC1D9Q6ZT07 1266 aa7.66□□□□□ -1.18
SCLT1-207ENST00000506233 ZBTB40Q9NUA8 1239 aa7.66□□□□□ -1.18
SCLT1-207ENST00000506233 NFE2L2Q16236 605 aa7.65□□□□□ -1.18
SCLT1-207ENST00000506233 MTHFSDQ2M296 383 aaKnown RBP7.65□□□□□ -1.18
SCLT1-207ENST00000506233 NPAS4Q8IUM7 802 aa7.65□□□□□ -1.18
SCLT1-207ENST00000506233 NGEFQ8N5V2 710 aa7.65□□□□□ -1.18
SCLT1-207ENST00000506233 AHDC1Q5TGY3 1603 aaPredicted RBP7.65□□□□□ -1.18
SCLT1-207ENST00000506233 DIAPH1O60610 1272 aaKnown RBP7.65□□□□□ -1.18
SCLT1-207ENST00000506233 ZNF710Q8N1W2 664 aa7.65□□□□□ -1.18
SCLT1-207ENST00000506233 FLT4P35916 1363 aa7.65□□□□□ -1.19
SCLT1-207ENST00000506233 TMEM106CQ9BVX2 250 aa7.65□□□□□ -1.19
SCLT1-207ENST00000506233 COL5A3P25940 1745 aaPredicted RBP7.64□□□□□ -1.19
SCLT1-207ENST00000506233 ZBTB7BO15156 539 aaPredicted RBP7.64□□□□□ -1.19
SCLT1-207ENST00000506233 NDUFV2P19404 249 aa7.64□□□□□ -1.19
SCLT1-207ENST00000506233 IL17REQ8NFR9 667 aa7.64□□□□□ -1.19
SCLT1-207ENST00000506233 CABLES1Q8TDN4 633 aa7.64□□□□□ -1.19
SCLT1-207ENST00000506233 PDE3AQ14432 1141 aa7.64□□□□□ -1.19
SCLT1-207ENST00000506233 DDX17Q92841 729 aaKnown RBP7.64□□□□□ -1.19
SCLT1-207ENST00000506233 MOXD2PA6NHM9 499 aa7.64□□□□□ -1.19
SCLT1-207ENST00000506233 C8orf37Q96NL8 207 aa7.64□□□□□ -1.19
SCLT1-207ENST00000506233 OVOS2A0A0G2JMS6 1433 aa7.63□□□□□ -1.19
SCLT1-207ENST00000506233 TMC2Q8TDI7 906 aa7.63□□□□□ -1.19
SCLT1-207ENST00000506233 PXYLP1Q8TE99 480 aa7.63□□□□□ -1.19
SCLT1-207ENST00000506233 WDR43Q15061 677 aaKnown RBP eCLIP7.63□□□□□ -1.19
SCLT1-207ENST00000506233 NBPF6Q5VWK0 638 aa7.63□□□□□ -1.19
SCLT1-207ENST00000506233 NBPF4Q96M43 638 aa7.63□□□□□ -1.19
SCLT1-207ENST00000506233 SALL3Q9BXA9 1300 aa7.63□□□□□ -1.19
SCLT1-207ENST00000506233 U2AF1L5P0DN76 240 aaPredicted RBP7.63□□□□□ -1.19
SCLT1-207ENST00000506233 U2AF1Q01081 240 aaKnown RBP eCLIP7.63□□□□□ -1.19
SCLT1-207ENST00000506233 NAALADL2Q58DX5 795 aa7.63□□□□□ -1.19
SCLT1-207ENST00000506233 RSBN1LQ6PCB5 846 aaPredicted RBP7.63□□□□□ -1.19
SCLT1-207ENST00000506233 TMED8Q6PL24 325 aaPredicted RBP7.63□□□□□ -1.19
SCLT1-207ENST00000506233 KIAA0232Q92628 1395 aa7.62□□□□□ -1.19
SCLT1-207ENST00000506233 RIPK4P57078 832 aa7.62□□□□□ -1.19
SCLT1-207ENST00000506233 AFDNP55196 1824 aaKnown RBP7.62□□□□□ -1.19
SCLT1-207ENST00000506233 LILRB3O75022 631 aa7.62□□□□□ -1.19
SCLT1-207ENST00000506233 ARHGEF25Q86VW2 580 aa7.62□□□□□ -1.19
SCLT1-207ENST00000506233 ZNF831Q5JPB2 1677 aa7.62□□□□□ -1.19
SCLT1-207ENST00000506233 ANKRD33BA6NCL7 494 aa7.62□□□□□ -1.19
SCLT1-207ENST00000506233 HDGFL2Q7Z4V5 671 aaPredicted RBP7.62□□□□□ -1.19
SCLT1-207ENST00000506233 EN1Q05925 392 aaPredicted RBP7.61□□□□□ -1.19
SCLT1-207ENST00000506233 TMEM94Q12767 1356 aa7.61□□□□□ -1.19
SCLT1-207ENST00000506233 DISP2A7MBM2 1401 aa7.61□□□□□ -1.19
SCLT1-207ENST00000506233 SOCS7O14512 581 aa7.61□□□□□ -1.19
SCLT1-207ENST00000506233 EVI5O60447 810 aa7.61□□□□□ -1.19
SCLT1-207ENST00000506233 IFT57Q9NWB7 429 aa7.61□□□□□ -1.19
SCLT1-207ENST00000506233 NOB1Q9ULX3 412 aaKnown RBP7.61□□□□□ -1.19
SCLT1-207ENST00000506233 ANKRD36CQ5JPF3 1778 aa7.61□□□□□ -1.19
SCLT1-207ENST00000506233 NDUFB9Q9Y6M9 179 aa7.6□□□□□ -1.19
SCLT1-207ENST00000506233 PXDNLA1KZ92 1463 aa7.6□□□□□ -1.19
SCLT1-207ENST00000506233 COL5A2P05997 1499 aaPredicted RBP7.6□□□□□ -1.19
SCLT1-207ENST00000506233 ZC3H4Q9UPT8 1303 aaKnown RBP7.6□□□□□ -1.19
SCLT1-207ENST00000506233 SOWAHDA6NJG2 315 aa7.6□□□□□ -1.19
SCLT1-207ENST00000506233 ZC3H6P61129 1189 aaKnown RBP7.6□□□□□ -1.19
SCLT1-207ENST00000506233 MCM10Q7L590 875 aa7.6□□□□□ -1.19
SCLT1-207ENST00000506233 TMEM57Q8N5G2 664 aa7.6□□□□□ -1.19
SCLT1-207ENST00000506233 KIF2CQ99661 725 aa7.6□□□□□ -1.19
SCLT1-207ENST00000506233 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.6□□□□□ -1.19
SCLT1-207ENST00000506233 ANKRD62A6NC57 917 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms