RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 DDX54Q8TDD1 881 aaKnown RBP9.18□□□□□ -0.94
PPARGC1A-204ENST00000506055 TTC14Q96N46 770 aa9.18□□□□□ -0.94
PPARGC1A-204ENST00000506055 ECHDC1Q9NTX5 307 aa9.18□□□□□ -0.94
PPARGC1A-204ENST00000506055 AXIN2Q9Y2T1 843 aa9.18□□□□□ -0.94
PPARGC1A-204ENST00000506055 PRPF40BQ6NWY9 871 aaKnown RBP9.18□□□□□ -0.94
PPARGC1A-204ENST00000506055 RUFY2Q8WXA3 655 aa9.18□□□□□ -0.94
PPARGC1A-204ENST00000506055 SYAP1Q96A49 352 aaPredicted RBP9.18□□□□□ -0.94
PPARGC1A-204ENST00000506055 CNPY2Q9Y2B0 182 aa9.18□□□□□ -0.94
PPARGC1A-204ENST00000506055 NFAT5O94916 1531 aa9.17□□□□□ -0.94
PPARGC1A-204ENST00000506055 SYT1P21579 422 aa9.17□□□□□ -0.94
PPARGC1A-204ENST00000506055 ADCK5Q3MIX3 580 aa9.17□□□□□ -0.94
PPARGC1A-204ENST00000506055 ARHGEF25Q86VW2 580 aa9.17□□□□□ -0.94
PPARGC1A-204ENST00000506055 GPATCH3Q96I76 525 aa9.17□□□□□ -0.94
PPARGC1A-204ENST00000506055 PDLIM2Q96JY6 352 aa9.17□□□□□ -0.94
PPARGC1A-204ENST00000506055 JAKMIP1Q96N16 626 aaKnown RBP9.17□□□□□ -0.94
PPARGC1A-204ENST00000506055 SIL1Q9H173 461 aa9.17□□□□□ -0.94
PPARGC1A-204ENST00000506055 TSPY26PQ9H489 355 aa9.17□□□□□ -0.94
PPARGC1A-204ENST00000506055 SMC3Q9UQE7 1217 aa9.17□□□□□ -0.94
PPARGC1A-204ENST00000506055 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.17□□□□□ -0.94
PPARGC1A-204ENST00000506055 STX6O43752 255 aa9.17□□□□□ -0.94
PPARGC1A-204ENST00000506055 ALDH1L1O75891 902 aa9.17□□□□□ -0.94
PPARGC1A-204ENST00000506055 RGPD2P0DJD1 1756 aa9.17□□□□□ -0.94
PPARGC1A-204ENST00000506055 MTX1Q13505 466 aa9.17□□□□□ -0.94
PPARGC1A-204ENST00000506055 CCDC8Q9H0W5 538 aaPredicted RBP9.17□□□□□ -0.94
PPARGC1A-204ENST00000506055 HYPKQ9NX55 129 aa9.17□□□□□ -0.94
PPARGC1A-204ENST00000506055 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.17□□□□□ -0.94
PPARGC1A-204ENST00000506055 N4BP2Q86UW6 1770 aaPredicted RBP9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 PXDNQ92626 1479 aa9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 RPAP1Q9BWH6 1393 aaPredicted RBP9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 USP42Q9H9J4 1324 aaKnown RBP9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 LARGE1O95461 756 aa9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 ZSCAN22P10073 491 aaPredicted RBP9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 MYL6BP14649 208 aa9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 KCNJ4P48050 445 aa9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 CCDC83Q8IWF9 413 aa9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 BICC1Q9H694 974 aaKnown RBP9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 PDRG1Q9NUG6 133 aa9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 NOL7Q9UMY1 257 aaKnown RBP9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 MED1Q15648 1581 aaPredicted RBP9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 GRM8O00222 908 aa9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 G3BP1Q13283 466 aaKnown RBP eCLIP9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 SLC39A6Q13433 755 aa9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 HS1BP3Q53T59 392 aa9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 ERC1Q8IUD2 1116 aa9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 KLHDC4Q8TBB5 520 aa9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 EVI5LQ96CN4 794 aa9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 SUCLG2Q96I99 432 aa9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 CYP46A1Q9Y6A2 500 aa9.16□□□□□ -0.94
PPARGC1A-204ENST00000506055 PHF14O94880 888 aa9.15□□□□□ -0.94
PPARGC1A-204ENST00000506055 SASH1O94885 1247 aa9.15□□□□□ -0.94
PPARGC1A-204ENST00000506055 DDX58O95786 925 aaKnown RBP9.15□□□□□ -0.94
PPARGC1A-204ENST00000506055 ZC3H6P61129 1189 aaKnown RBP9.15□□□□□ -0.94
PPARGC1A-204ENST00000506055 RIC3Q7Z5B4 369 aa9.15□□□□□ -0.94
PPARGC1A-204ENST00000506055 LINS1Q8NG48 757 aa9.15□□□□□ -0.94
PPARGC1A-204ENST00000506055 EAF2Q96CJ1 260 aaPredicted RBP9.15□□□□□ -0.94
PPARGC1A-204ENST00000506055 KAZALD1Q96I82 304 aa9.15□□□□□ -0.94
PPARGC1A-204ENST00000506055 FAM227BQ96M60 508 aa9.15□□□□□ -0.94
PPARGC1A-204ENST00000506055 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.15□□□□□ -0.94
PPARGC1A-204ENST00000506055 HDAC5Q9UQL6 1122 aa9.15□□□□□ -0.94
PPARGC1A-204ENST00000506055 USP54Q70EL1 1684 aa9.15□□□□□ -0.94
PPARGC1A-204ENST00000506055 KDM3BQ7LBC6 1761 aa9.15□□□□□ -0.94
PPARGC1A-204ENST00000506055 FIBPO43427 364 aa9.15□□□□□ -0.95
PPARGC1A-204ENST00000506055 GJB2P29033 226 aa9.15□□□□□ -0.95
PPARGC1A-204ENST00000506055 OFD1O75665 1012 aa9.14□□□□□ -0.95
PPARGC1A-204ENST00000506055 ZKSCAN1P17029 563 aaPredicted RBP9.14□□□□□ -0.95
PPARGC1A-204ENST00000506055 VPS53Q5VIR6 699 aa9.14□□□□□ -0.95
PPARGC1A-204ENST00000506055 NECAB1Q8N987 351 aa9.14□□□□□ -0.95
PPARGC1A-204ENST00000506055 BOLA2Q9H3K6 86 aa9.14□□□□□ -0.95
PPARGC1A-204ENST00000506055 TLR7Q9NYK1 1049 aaKnown RBP9.14□□□□□ -0.95
PPARGC1A-204ENST00000506055 F13A1P00488 732 aa9.14□□□□□ -0.95
PPARGC1A-204ENST00000506055 PTMAP06454 111 aaKnown RBP9.14□□□□□ -0.95
PPARGC1A-204ENST00000506055 NMIQ13287 307 aaPredicted RBP9.14□□□□□ -0.95
PPARGC1A-204ENST00000506055 PDIA6Q15084 440 aa9.14□□□□□ -0.95
PPARGC1A-204ENST00000506055 NECTIN1Q15223 517 aa9.14□□□□□ -0.95
PPARGC1A-204ENST00000506055 NFATC2IPQ8NCF5 419 aa9.14□□□□□ -0.95
PPARGC1A-204ENST00000506055 JARID2Q92833 1246 aaPredicted RBP9.14□□□□□ -0.95
PPARGC1A-204ENST00000506055 ZSWIM6Q9HCJ5 1215 aa9.14□□□□□ -0.95
PPARGC1A-204ENST00000506055 DDX21Q9NR30 783 aaKnown RBP eCLIP9.14□□□□□ -0.95
PPARGC1A-204ENST00000506055 VPS37CA5D8V6 355 aaPredicted RBP9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 IGKV5-2P06315 115 aa9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 KRT28Q7Z3Y7 464 aa9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 MPNDQ8N594 471 aa9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 CCDC39Q9UFE4 941 aa9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 RBM8AQ9Y5S9 174 aaKnown RBP9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 ADGRL3Q9HAR2 1447 aa9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 LMO7Q8WWI1 1683 aa9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 CCDC171Q6TFL3 1326 aa9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 PIP4K2AP48426 406 aaPredicted RBP9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 DNM1Q05193 864 aaKnown RBP9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 NEXNQ0ZGT2 675 aa9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 COL9A3Q14050 684 aaPredicted RBP9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 HSP90AA2PQ14568 343 aaPredicted RBP9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 ME3Q16798 604 aa9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 CREB3L3Q68CJ9 461 aa9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 ZNF790Q6PG37 636 aa9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 FSD1Q9BTV5 496 aa9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 NLRP2Q9NX02 1062 aa9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 ZKSCAN5Q9Y2L8 839 aa9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 ATP6V1DQ9Y5K8 247 aa9.13□□□□□ -0.95
PPARGC1A-204ENST00000506055 HEG1Q9ULI3 1381 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms