RNA–Protein interactions for RNA: ENST00000506023.1

BRIX1-202, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 3

Gene BRIX1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-202ENST00000506023 KDM3BQ7LBC6 1761 aa13.99□□□□□ -0.17
BRIX1-202ENST00000506023 LTBP1Q14766 1721 aa13.99□□□□□ -0.17
BRIX1-202ENST00000506023 COL4A5P29400 1685 aa13.99□□□□□ -0.17
BRIX1-202ENST00000506023 DDNO94850 711 aaPredicted RBP13.99□□□□□ -0.17
BRIX1-202ENST00000506023 STARD3NLO95772 234 aa13.99□□□□□ -0.17
BRIX1-202ENST00000506023 IL6STP40189 918 aaPredicted RBP13.99□□□□□ -0.17
BRIX1-202ENST00000506023 OLFM4Q6UX06 510 aa13.99□□□□□ -0.17
BRIX1-202ENST00000506023 TTC5Q8N0Z6 440 aa13.99□□□□□ -0.17
BRIX1-202ENST00000506023 USP16Q9Y5T5 823 aa13.99□□□□□ -0.17
BRIX1-202ENST00000506023 GNAT3A8MTJ3 354 aa13.98□□□□□ -0.17
BRIX1-202ENST00000506023 U2SURPO15042 1029 aaKnown RBP13.98□□□□□ -0.17
BRIX1-202ENST00000506023 SRGNP10124 158 aa13.98□□□□□ -0.17
BRIX1-202ENST00000506023 ERFEQ4G0M1 354 aa13.98□□□□□ -0.17
BRIX1-202ENST00000506023 SLC51AQ86UW1 340 aa13.98□□□□□ -0.17
BRIX1-202ENST00000506023 C7orf43Q8WVR3 580 aa13.98□□□□□ -0.17
BRIX1-202ENST00000506023 RSPH6AQ9H0K4 717 aa13.98□□□□□ -0.17
BRIX1-202ENST00000506023 SNED1Q8TER0 1413 aa13.98□□□□□ -0.17
BRIX1-202ENST00000506023 NPC1L1Q9UHC9 1359 aa13.97□□□□□ -0.17
BRIX1-202ENST00000506023 LTBP3Q9NS15 1303 aa13.97□□□□□ -0.17
BRIX1-202ENST00000506023 A0A087WZG4 1122 aa13.97□□□□□ -0.17
BRIX1-202ENST00000506023 PRPF40BQ6NWY9 871 aaKnown RBP13.97□□□□□ -0.17
BRIX1-202ENST00000506023 TNS4Q8IZW8 715 aa13.97□□□□□ -0.17
BRIX1-202ENST00000506023 NBPF26B4DH59 902 aa13.96□□□□□ -0.17
BRIX1-202ENST00000506023 PDE6BP35913 854 aa13.96□□□□□ -0.17
BRIX1-202ENST00000506023 TEFQ10587 303 aa13.96□□□□□ -0.17
BRIX1-202ENST00000506023 NBPF10Q6P3W6 841 aaKnown RBP13.96□□□□□ -0.17
BRIX1-202ENST00000506023 NBPF15Q8N660 670 aa13.96□□□□□ -0.17
BRIX1-202ENST00000506023 TAOK3Q9H2K8 898 aa13.96□□□□□ -0.17
BRIX1-202ENST00000506023 ZNF541Q9H0D2 1346 aa13.95□□□□□ -0.18
BRIX1-202ENST00000506023 PRKAR2BP31323 418 aa13.95□□□□□ -0.18
BRIX1-202ENST00000506023 DZIP3Q86Y13 1208 aaKnown RBP13.95□□□□□ -0.18
BRIX1-202ENST00000506023 CNBD1Q8NA66 436 aa13.95□□□□□ -0.18
BRIX1-202ENST00000506023 GAS2L2Q8NHY3 880 aa13.95□□□□□ -0.18
BRIX1-202ENST00000506023 CCER1Q8TC90 406 aaPredicted RBP13.95□□□□□ -0.18
BRIX1-202ENST00000506023 FMNL2Q96PY5 1086 aa13.95□□□□□ -0.18
BRIX1-202ENST00000506023 MKRN1Q9UHC7 482 aaKnown RBP13.95□□□□□ -0.18
BRIX1-202ENST00000506023 PASKQ96RG2 1323 aa13.94□□□□□ -0.18
BRIX1-202ENST00000506023 DCTN1Q14203 1278 aa13.94□□□□□ -0.18
BRIX1-202ENST00000506023 STYK1Q6J9G0 422 aa13.94□□□□□ -0.18
BRIX1-202ENST00000506023 CHADLQ6NUI6 762 aa13.94□□□□□ -0.18
BRIX1-202ENST00000506023 MCM10Q7L590 875 aa13.94□□□□□ -0.18
BRIX1-202ENST00000506023 BTBD11A6QL63 1104 aa13.93□□□□□ -0.18
BRIX1-202ENST00000506023 SETDB2Q96T68 719 aa13.93□□□□□ -0.18
BRIX1-202ENST00000506023 TEX13AQ9BXU3 409 aaPredicted RBP13.93□□□□□ -0.18
BRIX1-202ENST00000506023 LAMB2P55268 1798 aa13.92□□□□□ -0.18
BRIX1-202ENST00000506023 KLRG2A4D1S0 409 aaPredicted RBP13.92□□□□□ -0.18
BRIX1-202ENST00000506023 HLFQ16534 295 aa13.92□□□□□ -0.18
BRIX1-202ENST00000506023 DPY19L2Q6NUT2 758 aa13.92□□□□□ -0.18
BRIX1-202ENST00000506023 MASTLQ96GX5 879 aa13.92□□□□□ -0.18
BRIX1-202ENST00000506023 ABCC12Q96J65 1359 aa13.92□□□□□ -0.18
BRIX1-202ENST00000506023 ITGBL1O95965 494 aaPredicted RBP13.91□□□□□ -0.18
BRIX1-202ENST00000506023 CNKSR1Q969H4 720 aa13.91□□□□□ -0.18
BRIX1-202ENST00000506023 L3MBTL3Q96JM7 780 aaPredicted RBP13.91□□□□□ -0.18
BRIX1-202ENST00000506023 TAF1DQ9H5J8 278 aaPredicted RBP13.91□□□□□ -0.18
BRIX1-202ENST00000506023 ZNF277Q9NRM2 450 aaPredicted RBP13.91□□□□□ -0.18
BRIX1-202ENST00000506023 CREBZFQ9NS37 354 aa13.91□□□□□ -0.18
BRIX1-202ENST00000506023 CNTNAP1P78357 1384 aa13.91□□□□□ -0.18
BRIX1-202ENST00000506023 FOXN1O15353 648 aa13.9□□□□□ -0.18
BRIX1-202ENST00000506023 ST5P78524 1137 aa13.9□□□□□ -0.18
BRIX1-202ENST00000506023 PDZRN3Q9UPQ7 1066 aa13.9□□□□□ -0.18
BRIX1-202ENST00000506023 TAF1P21675 1872 aa13.9□□□□□ -0.18
BRIX1-202ENST00000506023 THSD7BQ9C0I4 1608 aa13.9□□□□□ -0.19
BRIX1-202ENST00000506023 FAM177BA6PVY3 158 aa13.89□□□□□ -0.19
BRIX1-202ENST00000506023 NBPF5PQ86XG9 351 aaPredicted RBP13.89□□□□□ -0.19
BRIX1-202ENST00000506023 MIS18AQ9NYP9 233 aa13.89□□□□□ -0.19
BRIX1-202ENST00000506023 TRPM7Q96QT4 1865 aa13.89□□□□□ -0.19
BRIX1-202ENST00000506023 SNRPA1P09661 255 aaKnown RBP13.87□□□□□ -0.19
BRIX1-202ENST00000506023 NPR1P16066 1061 aa13.87□□□□□ -0.19
BRIX1-202ENST00000506023 PPP2R1AP30153 589 aa13.87□□□□□ -0.19
BRIX1-202ENST00000506023 VEGFBP49765 207 aa13.87□□□□□ -0.19
BRIX1-202ENST00000506023 FKBP4Q02790 459 aaKnown RBP eCLIP13.87□□□□□ -0.19
BRIX1-202ENST00000506023 FMR1Q06787 632 aaKnown RBP eCLIP13.87□□□□□ -0.19
BRIX1-202ENST00000506023 CCDC93Q567U6 631 aa13.87□□□□□ -0.19
BRIX1-202ENST00000506023 CLEC4GQ6UXB4 293 aa13.87□□□□□ -0.19
BRIX1-202ENST00000506023 NIP7Q9Y221 180 aaKnown RBP eCLIP13.87□□□□□ -0.19
BRIX1-202ENST00000506023 RNF123Q5XPI4 1314 aa13.87□□□□□ -0.19
BRIX1-202ENST00000506023 ANKRD36CQ5JPF3 1778 aa13.86□□□□□ -0.19
BRIX1-202ENST00000506023 LDHDQ86WU2 507 aa13.86□□□□□ -0.19
BRIX1-202ENST00000506023 UBN2Q6ZU65 1347 aa13.86□□□□□ -0.19
BRIX1-202ENST00000506023 FZD9O00144 591 aa13.85□□□□□ -0.19
BRIX1-202ENST00000506023 NPHP1O15259 732 aa13.85□□□□□ -0.19
BRIX1-202ENST00000506023 TTLL7Q6ZT98 887 aa13.85□□□□□ -0.19
BRIX1-202ENST00000506023 C3orf67Q6ZVT6 689 aa13.85□□□□□ -0.19
BRIX1-202ENST00000506023 NUTM1Q86Y26 1132 aa13.85□□□□□ -0.19
BRIX1-202ENST00000506023 U2AF1L5P0DN76 240 aaPredicted RBP13.84□□□□□ -0.19
BRIX1-202ENST00000506023 U2AF1Q01081 240 aaKnown RBP eCLIP13.84□□□□□ -0.19
BRIX1-202ENST00000506023 CRY2Q49AN0 593 aa13.84□□□□□ -0.19
BRIX1-202ENST00000506023 EAPPQ56P03 285 aaPredicted RBP13.84□□□□□ -0.19
BRIX1-202ENST00000506023 SOGA3Q5TF21 947 aa13.84□□□□□ -0.19
BRIX1-202ENST00000506023 MAP1SQ66K74 1059 aaPredicted RBP13.84□□□□□ -0.19
BRIX1-202ENST00000506023 SYNE4Q8N205 404 aa13.84□□□□□ -0.19
BRIX1-202ENST00000506023 RIC1Q4ADV7 1423 aa13.83□□□□□ -0.2
BRIX1-202ENST00000506023 COL4A1P02462 1669 aa13.83□□□□□ -0.2
BRIX1-202ENST00000506023 IQCA1LA6NCM1 817 aa13.83□□□□□ -0.2
BRIX1-202ENST00000506023 EPHX2P34913 555 aa13.83□□□□□ -0.2
BRIX1-202ENST00000506023 IARSP41252 1262 aaKnown RBP13.83□□□□□ -0.2
BRIX1-202ENST00000506023 THUMPD2Q9BTF0 503 aaKnown RBP13.83□□□□□ -0.2
BRIX1-202ENST00000506023 U3KPZ7 1027 aaPredicted RBP13.83□□□□□ -0.2
BRIX1-202ENST00000506023 TMEM88BA6NKF7 163 aa13.82□□□□□ -0.2
BRIX1-202ENST00000506023 TPTE2Q6XPS3 522 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms