RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 ATP4AP20648 1035 aa7.58□□□□□ -1.2
CHD1-203ENST00000505657 MSX1P28360 303 aa7.58□□□□□ -1.2
CHD1-203ENST00000505657 NOS2P35228 1153 aa7.58□□□□□ -1.2
CHD1-203ENST00000505657 PSMA6P60900 246 aaKnown RBP7.58□□□□□ -1.2
CHD1-203ENST00000505657 POTEAQ6S8J7 498 aa7.58□□□□□ -1.2
CHD1-203ENST00000505657 CHMP7Q8WUX9 453 aaPredicted RBP7.58□□□□□ -1.2
CHD1-203ENST00000505657 CLP1Q92989 425 aaKnown RBP7.58□□□□□ -1.2
CHD1-203ENST00000505657 L3MBTL2Q969R5 705 aa7.58□□□□□ -1.2
CHD1-203ENST00000505657 GAS2L1Q99501 681 aaPredicted RBP7.58□□□□□ -1.2
CHD1-203ENST00000505657 GPAMQ9HCL2 828 aa7.58□□□□□ -1.2
CHD1-203ENST00000505657 DYRK1BQ9Y463 629 aa7.58□□□□□ -1.2
CHD1-203ENST00000505657 SERTM1A2A2V5 107 aa7.57□□□□□ -1.2
CHD1-203ENST00000505657 IGFBP4P22692 258 aa7.57□□□□□ -1.2
CHD1-203ENST00000505657 FKBP5Q13451 457 aaPredicted RBP7.57□□□□□ -1.2
CHD1-203ENST00000505657 C2orf49Q9BVC5 232 aaPredicted RBP7.57□□□□□ -1.2
CHD1-203ENST00000505657 ZNF232Q9UNY5 417 aa7.57□□□□□ -1.2
CHD1-203ENST00000505657 A0A1B0GTH6 734 aa7.56□□□□□ -1.2
CHD1-203ENST00000505657 K7ELQ4 463 aaPredicted RBP7.56□□□□□ -1.2
CHD1-203ENST00000505657 SCNN1AP37088 669 aa7.56□□□□□ -1.2
CHD1-203ENST00000505657 AIDAQ96BJ3 306 aa7.56□□□□□ -1.2
CHD1-203ENST00000505657 RUBCNLQ9H714 662 aa7.56□□□□□ -1.2
CHD1-203ENST00000505657 CXXC1Q9P0U4 656 aaPredicted RBP7.56□□□□□ -1.2
CHD1-203ENST00000505657 HCN4Q9Y3Q4 1203 aa7.56□□□□□ -1.2
CHD1-203ENST00000505657 HIRAP54198 1017 aaPredicted RBP7.55□□□□□ -1.2
CHD1-203ENST00000505657 CAPN12Q6ZSI9 719 aa7.55□□□□□ -1.2
CHD1-203ENST00000505657 KRBA1A5PL33 1030 aa7.54□□□□□ -1.2
CHD1-203ENST00000505657 H7C1W4 665 aa7.54□□□□□ -1.2
CHD1-203ENST00000505657 F11P03951 625 aa7.54□□□□□ -1.2
CHD1-203ENST00000505657 ATP2B4P23634 1241 aa7.54□□□□□ -1.2
CHD1-203ENST00000505657 BAG6P46379 1132 aa7.54□□□□□ -1.2
CHD1-203ENST00000505657 SNRPNP63162 240 aaKnown RBP7.54□□□□□ -1.2
CHD1-203ENST00000505657 STAG2Q8N3U4 1231 aa7.54□□□□□ -1.2
CHD1-203ENST00000505657 TRERF1Q96PN7 1200 aa7.54□□□□□ -1.2
CHD1-203ENST00000505657 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
CHD1-203ENST00000505657 PHACTR1Q9C0D0 580 aa7.54□□□□□ -1.2
CHD1-203ENST00000505657 USTQ9Y2C2 406 aa7.54□□□□□ -1.2
CHD1-203ENST00000505657 OIP5O43482 229 aa7.53□□□□□ -1.2
CHD1-203ENST00000505657 FOXO3O43524 673 aa7.53□□□□□ -1.2
CHD1-203ENST00000505657 MX2P20592 715 aa7.53□□□□□ -1.2
CHD1-203ENST00000505657 NBPF1Q3BBV0 1214 aa7.53□□□□□ -1.2
CHD1-203ENST00000505657 PHLDB3Q6NSJ2 640 aa7.53□□□□□ -1.2
CHD1-203ENST00000505657 C7orf43Q8WVR3 580 aa7.53□□□□□ -1.2
CHD1-203ENST00000505657 NGLY1Q96IV0 654 aa7.53□□□□□ -1.2
CHD1-203ENST00000505657 MKNK1Q9BUB5 465 aa7.53□□□□□ -1.2
CHD1-203ENST00000505657 LRRC4BQ9NT99 713 aa7.53□□□□□ -1.2
CHD1-203ENST00000505657 ZDHHC3Q9NYG2 299 aa7.53□□□□□ -1.2
CHD1-203ENST00000505657 ALDH16A1Q8IZ83 802 aa7.52□□□□□ -1.21
CHD1-203ENST00000505657 Q8N3U1 123 aa7.52□□□□□ -1.21
CHD1-203ENST00000505657 ZIC5Q96T25 663 aa7.52□□□□□ -1.21
CHD1-203ENST00000505657 QTRT2Q9H974 415 aaKnown RBP7.52□□□□□ -1.21
CHD1-203ENST00000505657 CHMP3Q9Y3E7 222 aa7.52□□□□□ -1.21
CHD1-203ENST00000505657 FURINP09958 794 aa7.51□□□□□ -1.21
CHD1-203ENST00000505657 TATP17735 454 aaPredicted RBP7.51□□□□□ -1.21
CHD1-203ENST00000505657 SSFA2P28290 1259 aa7.51□□□□□ -1.21
CHD1-203ENST00000505657 UBAP2LQ14157 1087 aaKnown RBP7.51□□□□□ -1.21
CHD1-203ENST00000505657 NUCKS1Q9H1E3 243 aaKnown RBP7.51□□□□□ -1.21
CHD1-203ENST00000505657 CRISPLD1Q9H336 500 aa7.51□□□□□ -1.21
CHD1-203ENST00000505657 NSFL1CQ9UNZ2 370 aaKnown RBP7.51□□□□□ -1.21
CHD1-203ENST00000505657 A0A1W2PNR3 127 aa7.5□□□□□ -1.21
CHD1-203ENST00000505657 C1orf216Q8TAB5 229 aa7.5□□□□□ -1.21
CHD1-203ENST00000505657 HSH2DQ96JZ2 352 aa7.5□□□□□ -1.21
CHD1-203ENST00000505657 SHISA8B8ZZ34 492 aa7.49□□□□□ -1.21
CHD1-203ENST00000505657 COL8A1P27658 744 aa7.49□□□□□ -1.21
CHD1-203ENST00000505657 ARSJQ5FYB0 599 aaPredicted RBP7.49□□□□□ -1.21
CHD1-203ENST00000505657 C1orf53Q5VUE5 145 aa7.49□□□□□ -1.21
CHD1-203ENST00000505657 BICDL1Q6ZP65 573 aa7.49□□□□□ -1.21
CHD1-203ENST00000505657 C1orf229Q6ZS94 237 aaPredicted RBP7.49□□□□□ -1.21
CHD1-203ENST00000505657 RHPN1Q8TCX5 695 aa7.49□□□□□ -1.21
CHD1-203ENST00000505657 OXCT2Q9BYC2 517 aaPredicted RBP7.49□□□□□ -1.21
CHD1-203ENST00000505657 SAP130Q9H0E3 1048 aa7.49□□□□□ -1.21
CHD1-203ENST00000505657 SEPT3Q9UH03 358 aa7.49□□□□□ -1.21
CHD1-203ENST00000505657 HCN2Q9UL51 889 aa7.49□□□□□ -1.21
CHD1-203ENST00000505657 NAA30Q147X3 362 aaPredicted RBP7.48□□□□□ -1.21
CHD1-203ENST00000505657 PGBD3Q8N328 593 aa7.48□□□□□ -1.21
CHD1-203ENST00000505657 ZNF280CQ8ND82 737 aa7.48□□□□□ -1.21
CHD1-203ENST00000505657 VTI1AQ96AJ9 217 aa7.48□□□□□ -1.21
CHD1-203ENST00000505657 LRFN2Q9ULH4 789 aa7.48□□□□□ -1.21
CHD1-203ENST00000505657 RTN1Q16799 776 aa7.47□□□□□ -1.21
CHD1-203ENST00000505657 LRRC69Q6ZNQ3 347 aa7.47□□□□□ -1.21
CHD1-203ENST00000505657 KLK14Q9P0G3 267 aa7.47□□□□□ -1.21
CHD1-203ENST00000505657 MKL2Q9ULH7 1088 aa7.47□□□□□ -1.21
CHD1-203ENST00000505657 BCS1LQ9Y276 419 aa7.47□□□□□ -1.21
CHD1-203ENST00000505657 MAP2K3P46734 347 aa7.46□□□□□ -1.22
CHD1-203ENST00000505657 EFHC2Q5JST6 749 aa7.46□□□□□ -1.22
CHD1-203ENST00000505657 FAM26DQ5JW98 314 aa7.46□□□□□ -1.22
CHD1-203ENST00000505657 COX20Q5RI15 118 aa7.46□□□□□ -1.22
CHD1-203ENST00000505657 SUSD3Q96L08 255 aa7.46□□□□□ -1.22
CHD1-203ENST00000505657 ZCCHC2Q9C0B9 1178 aaKnown RBP7.46□□□□□ -1.22
CHD1-203ENST00000505657 DGKZQ13574 1117 aa7.45□□□□□ -1.22
CHD1-203ENST00000505657 LBRQ14739 615 aaKnown RBP7.45□□□□□ -1.22
CHD1-203ENST00000505657 COL26A1Q96A83 441 aa7.45□□□□□ -1.22
CHD1-203ENST00000505657 ABHD17AQ96GS6 310 aa7.45□□□□□ -1.22
CHD1-203ENST00000505657 MYO19Q96H55 970 aa7.45□□□□□ -1.22
CHD1-203ENST00000505657 PSMG3-AS1Q96PY0 264 aa7.45□□□□□ -1.22
CHD1-203ENST00000505657 CFHR5Q9BXR6 569 aa7.45□□□□□ -1.22
CHD1-203ENST00000505657 RRAGCQ9HB90 399 aa7.45□□□□□ -1.22
CHD1-203ENST00000505657 NDFIP2Q9NV92 336 aa7.45□□□□□ -1.22
CHD1-203ENST00000505657 DCDC2BA2VCK2 349 aa7.44□□□□□ -1.22
CHD1-203ENST00000505657 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.44□□□□□ -1.22
CHD1-203ENST00000505657 TNFRSF10BO14763 440 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms