RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 STX6O43752 255 aa19.28■□□□□ 0.68
DDX41-205ENST00000505081 GLRX3O76003 335 aaKnown RBP19.28■□□□□ 0.68
DDX41-205ENST00000505081 TPM2P07951 284 aa19.28■□□□□ 0.68
DDX41-205ENST00000505081 AKAP4Q5JQC9 854 aa19.28■□□□□ 0.68
DDX41-205ENST00000505081 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.28■□□□□ 0.68
DDX41-205ENST00000505081 SYAP1Q96A49 352 aaPredicted RBP19.28■□□□□ 0.68
DDX41-205ENST00000505081 JAKMIP1Q96N16 626 aaKnown RBP19.28■□□□□ 0.68
DDX41-205ENST00000505081 MED1Q15648 1581 aaPredicted RBP19.28■□□□□ 0.68
DDX41-205ENST00000505081 PXDNQ92626 1479 aa19.28■□□□□ 0.68
DDX41-205ENST00000505081 EPB41L2O43491 1005 aaKnown RBP19.28■□□□□ 0.68
DDX41-205ENST00000505081 SMC3Q9UQE7 1217 aa19.28■□□□□ 0.68
DDX41-205ENST00000505081 ZNF500O60304 480 aaPredicted RBP19.27■□□□□ 0.68
DDX41-205ENST00000505081 HOXB7P09629 217 aa19.27■□□□□ 0.68
DDX41-205ENST00000505081 AIMP1Q12904 312 aaKnown RBP19.27■□□□□ 0.68
DDX41-205ENST00000505081 HYPKQ9NX55 129 aa19.27■□□□□ 0.68
DDX41-205ENST00000505081 DBF4Q9UBU7 674 aaPredicted RBP19.27■□□□□ 0.68
DDX41-205ENST00000505081 KDM3BQ7LBC6 1761 aa19.27■□□□□ 0.68
DDX41-205ENST00000505081 RNMTO43148 476 aaKnown RBP19.27■□□□□ 0.67
DDX41-205ENST00000505081 HSP90AB4PQ58FF6 505 aa19.27■□□□□ 0.67
DDX41-205ENST00000505081 NFAT5O94916 1531 aa19.26■□□□□ 0.67
DDX41-205ENST00000505081 LMOD2Q6P5Q4 547 aa19.26■□□□□ 0.67
DDX41-205ENST00000505081 AACSQ86V21 672 aa19.26■□□□□ 0.67
DDX41-205ENST00000505081 ECHDC1Q9NTX5 307 aa19.26■□□□□ 0.67
DDX41-205ENST00000505081 RRP9O43818 475 aaKnown RBP19.26■□□□□ 0.67
DDX41-205ENST00000505081 IFIT2P09913 472 aaKnown RBP19.26■□□□□ 0.67
DDX41-205ENST00000505081 CCDC39Q9UFE4 941 aa19.26■□□□□ 0.67
DDX41-205ENST00000505081 TTC41PQ6P2S7 1318 aa19.26■□□□□ 0.67
DDX41-205ENST00000505081 GIGYF1O75420 1035 aaPredicted RBP19.25■□□□□ 0.67
DDX41-205ENST00000505081 PTMAP06454 111 aaKnown RBP19.25■□□□□ 0.67
DDX41-205ENST00000505081 PLEKHO1Q53GL0 409 aaPredicted RBP19.25■□□□□ 0.67
DDX41-205ENST00000505081 FAM227BQ96M60 508 aa19.25■□□□□ 0.67
DDX41-205ENST00000505081 CCDC8Q9H0W5 538 aaPredicted RBP19.25■□□□□ 0.67
DDX41-205ENST00000505081 USP42Q9H9J4 1324 aaKnown RBP19.25■□□□□ 0.67
DDX41-205ENST00000505081 F13A1P00488 732 aa19.25■□□□□ 0.67
DDX41-205ENST00000505081 GJB2P29033 226 aa19.25■□□□□ 0.67
DDX41-205ENST00000505081 NECAB1Q8N987 351 aa19.25■□□□□ 0.67
DDX41-205ENST00000505081 PDRG1Q9NUG6 133 aa19.25■□□□□ 0.67
DDX41-205ENST00000505081 RBM10P98175 930 aaKnown RBP19.24■□□□□ 0.67
DDX41-205ENST00000505081 ST3GAL1Q11201 340 aa19.24■□□□□ 0.67
DDX41-205ENST00000505081 SUCLG2Q96I99 432 aa19.24■□□□□ 0.67
DDX41-205ENST00000505081 TLR7Q9NYK1 1049 aaKnown RBP19.24■□□□□ 0.67
DDX41-205ENST00000505081 USP54Q70EL1 1684 aa19.24■□□□□ 0.67
DDX41-205ENST00000505081 MTX1Q13505 466 aa19.24■□□□□ 0.67
DDX41-205ENST00000505081 KLHDC4Q8TBB5 520 aa19.24■□□□□ 0.67
DDX41-205ENST00000505081 KAZALD1Q96I82 304 aa19.24■□□□□ 0.67
DDX41-205ENST00000505081 ZNF830Q96NB3 372 aaPredicted RBP19.24■□□□□ 0.67
DDX41-205ENST00000505081 SIL1Q9H173 461 aa19.24■□□□□ 0.67
DDX41-205ENST00000505081 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.24■□□□□ 0.67
DDX41-205ENST00000505081 C1orf141Q5JVX7 400 aa19.24■□□□□ 0.67
DDX41-205ENST00000505081 KSR2Q6VAB6 950 aa19.24■□□□□ 0.67
DDX41-205ENST00000505081 USP25Q9UHP3 1055 aa19.24■□□□□ 0.67
DDX41-205ENST00000505081 HCLS1P14317 486 aaPredicted RBP19.23■□□□□ 0.67
DDX41-205ENST00000505081 DNM1Q05193 864 aaKnown RBP19.23■□□□□ 0.67
DDX41-205ENST00000505081 TCEANC2Q96MN5 208 aa19.23■□□□□ 0.67
DDX41-205ENST00000505081 SASH1O94885 1247 aa19.23■□□□□ 0.67
DDX41-205ENST00000505081 TMEM87AQ8NBN3 555 aa19.23■□□□□ 0.67
DDX41-205ENST00000505081 EAF2Q96CJ1 260 aaPredicted RBP19.23■□□□□ 0.67
DDX41-205ENST00000505081 FER1L4A9Z1Z3 1794 aa19.22■□□□□ 0.67
DDX41-205ENST00000505081 BICC1Q9H694 974 aaKnown RBP19.22■□□□□ 0.67
DDX41-205ENST00000505081 ME3Q16798 604 aa19.22■□□□□ 0.67
DDX41-205ENST00000505081 CCDC183Q5T5S1 534 aa19.22■□□□□ 0.67
DDX41-205ENST00000505081 RUFY2Q8WXA3 655 aa19.22■□□□□ 0.67
DDX41-205ENST00000505081 ORAI2Q96SN7 254 aa19.22■□□□□ 0.67
DDX41-205ENST00000505081 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.22■□□□□ 0.67
DDX41-205ENST00000505081 PHF14O94880 888 aa19.21■□□□□ 0.67
DDX41-205ENST00000505081 NMIQ13287 307 aaPredicted RBP19.21■□□□□ 0.67
DDX41-205ENST00000505081 MTMR6Q9Y217 621 aa19.21■□□□□ 0.67
DDX41-205ENST00000505081 RBM8AQ9Y5S9 174 aaKnown RBP19.21■□□□□ 0.67
DDX41-205ENST00000505081 TAF6LQ9Y6J9 622 aa19.21■□□□□ 0.67
DDX41-205ENST00000505081 CRYBG1Q9Y4K1 1723 aa19.21■□□□□ 0.67
DDX41-205ENST00000505081 VPS37CA5D8V6 355 aaPredicted RBP19.21■□□□□ 0.67
DDX41-205ENST00000505081 AXIN2Q9Y2T1 843 aa19.21■□□□□ 0.67
DDX41-205ENST00000505081 ALDH1L1O75891 902 aa19.21■□□□□ 0.67
DDX41-205ENST00000505081 GCP02774 474 aa19.21■□□□□ 0.67
DDX41-205ENST00000505081 GIMAP6Q6P9H5 292 aa19.21■□□□□ 0.67
DDX41-205ENST00000505081 ZSWIM6Q9HCJ5 1215 aa19.21■□□□□ 0.67
DDX41-205ENST00000505081 CYP46A1Q9Y6A2 500 aa19.21■□□□□ 0.67
DDX41-205ENST00000505081 CCDC171Q6TFL3 1326 aa19.2■□□□□ 0.66
DDX41-205ENST00000505081 KCNJ4P48050 445 aa19.2■□□□□ 0.66
DDX41-205ENST00000505081 SLC39A6Q13433 755 aa19.2■□□□□ 0.66
DDX41-205ENST00000505081 NECTIN1Q15223 517 aa19.2■□□□□ 0.66
DDX41-205ENST00000505081 KCNH5Q8NCM2 988 aa19.2■□□□□ 0.66
DDX41-205ENST00000505081 ANKRD24Q8TF21 1146 aa19.2■□□□□ 0.66
DDX41-205ENST00000505081 JARID2Q92833 1246 aaPredicted RBP19.2■□□□□ 0.66
DDX41-205ENST00000505081 BOLA2Q9H3K6 86 aa19.2■□□□□ 0.66
DDX41-205ENST00000505081 UBE2HP62256 183 aa19.2■□□□□ 0.66
DDX41-205ENST00000505081 VPS53Q5VIR6 699 aa19.2■□□□□ 0.66
DDX41-205ENST00000505081 TPCN1Q9ULQ1 816 aa19.2■□□□□ 0.66
DDX41-205ENST00000505081 GRM8O00222 908 aa19.19■□□□□ 0.66
DDX41-205ENST00000505081 CREB3L3Q68CJ9 461 aa19.19■□□□□ 0.66
DDX41-205ENST00000505081 EVI5LQ96CN4 794 aa19.19■□□□□ 0.66
DDX41-205ENST00000505081 FAM173BQ6P4H8 233 aa19.19■□□□□ 0.66
DDX41-205ENST00000505081 GPATCH3Q96I76 525 aa19.19■□□□□ 0.66
DDX41-205ENST00000505081 LMO7Q8WWI1 1683 aa19.19■□□□□ 0.66
DDX41-205ENST00000505081 A0A0D9SFI3 127 aa19.18■□□□□ 0.66
DDX41-205ENST00000505081 FERMT3Q86UX7 667 aa19.18■□□□□ 0.66
DDX41-205ENST00000505081 EDC3Q96F86 508 aaKnown RBP19.18■□□□□ 0.66
DDX41-205ENST00000505081 MYL6BP14649 208 aa19.18■□□□□ 0.66
DDX41-205ENST00000505081 AMOTQ4VCS5 1084 aa19.18■□□□□ 0.66
DDX41-205ENST00000505081 ARHGEF25Q86VW2 580 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms