RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 MYL6BP14649 208 aa13.08□□□□□ -0.32
RFC1-210ENST00000505077 PROSER3Q2NL68 480 aa13.08□□□□□ -0.32
RFC1-210ENST00000505077 BCL2L13Q9BXK5 485 aa13.08□□□□□ -0.32
RFC1-210ENST00000505077 IBTKQ9P2D0 1353 aaPredicted RBP13.07□□□□□ -0.32
RFC1-210ENST00000505077 ATP10DQ9P241 1426 aa13.07□□□□□ -0.32
RFC1-210ENST00000505077 FKBP5Q13451 457 aaPredicted RBP13.07□□□□□ -0.32
RFC1-210ENST00000505077 ZNF827Q17R98 1081 aa13.07□□□□□ -0.32
RFC1-210ENST00000505077 ZKSCAN2Q63HK3 967 aa13.07□□□□□ -0.32
RFC1-210ENST00000505077 API5Q9BZZ5 524 aaKnown RBP13.07□□□□□ -0.32
RFC1-210ENST00000505077 TFCP2L1Q9NZI6 479 aa13.07□□□□□ -0.32
RFC1-210ENST00000505077 RNF123Q5XPI4 1314 aa13.07□□□□□ -0.32
RFC1-210ENST00000505077 NRXN2Q9P2S2 1712 aa13.06□□□□□ -0.32
RFC1-210ENST00000505077 ERVV-1B6SEH8 477 aa13.06□□□□□ -0.32
RFC1-210ENST00000505077 BCAR3O75815 825 aa13.06□□□□□ -0.32
RFC1-210ENST00000505077 SLC15A2Q16348 729 aa13.06□□□□□ -0.32
RFC1-210ENST00000505077 TRAPPC3LQ5T215 181 aa13.06□□□□□ -0.32
RFC1-210ENST00000505077 COPS6Q7L5N1 327 aa13.06□□□□□ -0.32
RFC1-210ENST00000505077 PLBD2Q8NHP8 589 aa13.06□□□□□ -0.32
RFC1-210ENST00000505077 XAGE3Q8WTP9 111 aa13.06□□□□□ -0.32
RFC1-210ENST00000505077 ZNF652Q9Y2D9 606 aa13.06□□□□□ -0.32
RFC1-210ENST00000505077 MAP3K15Q6ZN16 1313 aa13.06□□□□□ -0.32
RFC1-210ENST00000505077 ADCY9O60503 1353 aa13.06□□□□□ -0.32
RFC1-210ENST00000505077 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.05□□□□□ -0.32
RFC1-210ENST00000505077 TCERG1O14776 1098 aaKnown RBP13.05□□□□□ -0.32
RFC1-210ENST00000505077 ANXA1P04083 346 aa13.05□□□□□ -0.32
RFC1-210ENST00000505077 PIP4K2AP48426 406 aaPredicted RBP13.05□□□□□ -0.32
RFC1-210ENST00000505077 KSR2Q6VAB6 950 aa13.05□□□□□ -0.32
RFC1-210ENST00000505077 ATF7IPQ6VMQ6 1270 aa13.05□□□□□ -0.32
RFC1-210ENST00000505077 DZIP3Q86Y13 1208 aaKnown RBP13.05□□□□□ -0.32
RFC1-210ENST00000505077 PHAXQ9H814 394 aaKnown RBP13.05□□□□□ -0.32
RFC1-210ENST00000505077 ANO8Q9HCE9 1232 aaPredicted RBP13.05□□□□□ -0.32
RFC1-210ENST00000505077 NARFQ9UHQ1 456 aa13.05□□□□□ -0.32
RFC1-210ENST00000505077 ZNF330Q9Y3S2 320 aaPredicted RBP13.05□□□□□ -0.32
RFC1-210ENST00000505077 USP42Q9H9J4 1324 aaKnown RBP13.05□□□□□ -0.32
RFC1-210ENST00000505077 ZPR1O75312 459 aa13.04□□□□□ -0.32
RFC1-210ENST00000505077 RFC4P35249 363 aa13.04□□□□□ -0.32
RFC1-210ENST00000505077 RRP1P56182 461 aaKnown RBP13.04□□□□□ -0.32
RFC1-210ENST00000505077 HSP90AB3PQ58FF7 597 aa13.04□□□□□ -0.32
RFC1-210ENST00000505077 CLEC4GQ6UXB4 293 aa13.04□□□□□ -0.32
RFC1-210ENST00000505077 ANKRD13DQ6ZTN6 518 aa13.04□□□□□ -0.32
RFC1-210ENST00000505077 G2E3Q7L622 706 aa13.04□□□□□ -0.32
RFC1-210ENST00000505077 NOB1Q9ULX3 412 aaKnown RBP13.04□□□□□ -0.32
RFC1-210ENST00000505077 ABCC4O15439 1325 aa13.04□□□□□ -0.32
RFC1-210ENST00000505077 PNPLA7Q6ZV29 1317 aa13.04□□□□□ -0.32
RFC1-210ENST00000505077 DDX60Q8IY21 1712 aaKnown RBP13.03□□□□□ -0.32
RFC1-210ENST00000505077 TRIM27P14373 513 aa13.03□□□□□ -0.32
RFC1-210ENST00000505077 NEXNQ0ZGT2 675 aa13.03□□□□□ -0.32
RFC1-210ENST00000505077 AIMP1Q12904 312 aaKnown RBP13.03□□□□□ -0.32
RFC1-210ENST00000505077 PDE3AQ14432 1141 aa13.03□□□□□ -0.32
RFC1-210ENST00000505077 TTLL7Q6ZT98 887 aa13.03□□□□□ -0.32
RFC1-210ENST00000505077 RIC3Q7Z5B4 369 aa13.03□□□□□ -0.32
RFC1-210ENST00000505077 DNAAF4Q8WXU2 420 aa13.03□□□□□ -0.32
RFC1-210ENST00000505077 FRAT1Q92837 279 aaPredicted RBP13.03□□□□□ -0.32
RFC1-210ENST00000505077 KIF13BQ9NQT8 1826 aa13.02□□□□□ -0.32
RFC1-210ENST00000505077 PI4KAP2A4QPH2 592 aa13.02□□□□□ -0.33
RFC1-210ENST00000505077 PHF14O94880 888 aa13.02□□□□□ -0.33
RFC1-210ENST00000505077 CAMTA2O94983 1202 aa13.02□□□□□ -0.33
RFC1-210ENST00000505077 GIGYF2Q6Y7W6 1299 aaKnown RBP13.02□□□□□ -0.33
RFC1-210ENST00000505077 FTSJ3Q8IY81 847 aaKnown RBP13.02□□□□□ -0.33
RFC1-210ENST00000505077 PI4KAP1Q8N8J0 262 aa13.02□□□□□ -0.33
RFC1-210ENST00000505077 ARHGEF1Q92888 912 aaKnown RBP13.02□□□□□ -0.33
RFC1-210ENST00000505077 MAP3K2Q9Y2U5 619 aa13.02□□□□□ -0.33
RFC1-210ENST00000505077 SOCS7O14512 581 aa13.01□□□□□ -0.33
RFC1-210ENST00000505077 CCT4P50991 539 aaKnown RBP13.01□□□□□ -0.33
RFC1-210ENST00000505077 AMIGO3Q86WK7 504 aa13.01□□□□□ -0.33
RFC1-210ENST00000505077 SLC16A10Q8TF71 515 aa13.01□□□□□ -0.33
RFC1-210ENST00000505077 METTL22Q9BUU2 404 aaPredicted RBP13.01□□□□□ -0.33
RFC1-210ENST00000505077 TBC1D2BQ9UPU7 963 aa13.01□□□□□ -0.33
RFC1-210ENST00000505077 TRIM28Q13263 835 aaKnown RBP13□□□□□ -0.33
RFC1-210ENST00000505077 DZIP1LQ8IYY4 767 aaKnown RBP13□□□□□ -0.33
RFC1-210ENST00000505077 LINS1Q8NG48 757 aa13□□□□□ -0.33
RFC1-210ENST00000505077 ARXQ96QS3 562 aa13□□□□□ -0.33
RFC1-210ENST00000505077 ZBTB3Q9H5J0 574 aa13□□□□□ -0.33
RFC1-210ENST00000505077 DLEC1Q9Y238 1755 aa12.99□□□□□ -0.33
RFC1-210ENST00000505077 CARMIL3Q8ND23 1372 aa12.99□□□□□ -0.33
RFC1-210ENST00000505077 ALDH1L1O75891 902 aa12.99□□□□□ -0.33
RFC1-210ENST00000505077 TCIRG1Q13488 830 aa12.99□□□□□ -0.33
RFC1-210ENST00000505077 PARP10Q53GL7 1025 aa12.99□□□□□ -0.33
RFC1-210ENST00000505077 INTS3Q68E01 1043 aaKnown RBP12.99□□□□□ -0.33
RFC1-210ENST00000505077 COL23A1Q86Y22 540 aaPredicted RBP12.99□□□□□ -0.33
RFC1-210ENST00000505077 SUPT16HQ9Y5B9 1047 aaKnown RBP12.99□□□□□ -0.33
RFC1-210ENST00000505077 ANKRD31Q8N7Z5 1873 aa12.99□□□□□ -0.33
RFC1-210ENST00000505077 F6X3S4 739 aa12.98□□□□□ -0.33
RFC1-210ENST00000505077 GYS1P13807 737 aa12.98□□□□□ -0.33
RFC1-210ENST00000505077 USPL1Q5W0Q7 1092 aa12.98□□□□□ -0.33
RFC1-210ENST00000505077 NLGN1Q8N2Q7 840 aa12.98□□□□□ -0.33
RFC1-210ENST00000505077 CCDC191Q8NCU4 936 aa12.98□□□□□ -0.33
RFC1-210ENST00000505077 SRCIN1Q9C0H9 1055 aa12.98□□□□□ -0.33
RFC1-210ENST00000505077 CHMP4BQ9H444 224 aaKnown RBP12.98□□□□□ -0.33
RFC1-210ENST00000505077 FBXO3Q9UK99 471 aa12.98□□□□□ -0.33
RFC1-210ENST00000505077 HLFQ16534 295 aa12.97□□□□□ -0.33
RFC1-210ENST00000505077 BEND3Q5T5X7 828 aa12.97□□□□□ -0.33
RFC1-210ENST00000505077 ZNF34Q8IZ26 560 aa12.97□□□□□ -0.33
RFC1-210ENST00000505077 ISCA1Q9BUE6 129 aa12.97□□□□□ -0.33
RFC1-210ENST00000505077 BCL2L12Q9HB09 334 aa12.97□□□□□ -0.33
RFC1-210ENST00000505077 SRP68Q9UHB9 627 aaKnown RBP12.97□□□□□ -0.33
RFC1-210ENST00000505077 RIC1Q4ADV7 1423 aa12.96□□□□□ -0.33
RFC1-210ENST00000505077 NEURL1BA8MQ27 555 aa12.96□□□□□ -0.33
RFC1-210ENST00000505077 SAMD1Q6SPF0 538 aaPredicted RBP12.96□□□□□ -0.33
RFC1-210ENST00000505077 SLC4A10Q6U841 1118 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms