RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ISCA1Q9BUE6 129 aa10.72□□□□□ -0.69
CDC42SE2-208ENST00000505065 CHPF2Q9P2E5 772 aa10.72□□□□□ -0.69
CDC42SE2-208ENST00000505065 KLRG2A4D1S0 409 aaPredicted RBP10.71□□□□□ -0.69
CDC42SE2-208ENST00000505065 SBF1O95248 1867 aa10.71□□□□□ -0.69
CDC42SE2-208ENST00000505065 A1BGP04217 495 aa10.71□□□□□ -0.69
CDC42SE2-208ENST00000505065 PTGER2P43116 358 aa10.71□□□□□ -0.69
CDC42SE2-208ENST00000505065 ARHGEF1Q92888 912 aaKnown RBP10.71□□□□□ -0.69
CDC42SE2-208ENST00000505065 GYS1P13807 737 aa10.71□□□□□ -0.7
CDC42SE2-208ENST00000505065 SSH1Q8WYL5 1049 aa10.71□□□□□ -0.7
CDC42SE2-208ENST00000505065 SYTL4Q96C24 671 aaPredicted RBP10.71□□□□□ -0.7
CDC42SE2-208ENST00000505065 CASP7P55210 303 aa10.7□□□□□ -0.7
CDC42SE2-208ENST00000505065 PTCD1O75127 700 aaKnown RBP10.7□□□□□ -0.7
CDC42SE2-208ENST00000505065 PLBD2Q8NHP8 589 aa10.7□□□□□ -0.7
CDC42SE2-208ENST00000505065 TAF1P21675 1872 aa10.7□□□□□ -0.7
CDC42SE2-208ENST00000505065 RTL9Q8NET4 1388 aa10.69□□□□□ -0.7
CDC42SE2-208ENST00000505065 HDGFL1Q5TGJ6 251 aa10.69□□□□□ -0.7
CDC42SE2-208ENST00000505065 SF3B2Q13435 895 aaKnown RBP10.69□□□□□ -0.7
CDC42SE2-208ENST00000505065 RBM42Q9BTD8 480 aaKnown RBP10.69□□□□□ -0.7
CDC42SE2-208ENST00000505065 KCNQ4P56696 695 aa10.68□□□□□ -0.7
CDC42SE2-208ENST00000505065 GIGYF2Q6Y7W6 1299 aaKnown RBP10.68□□□□□ -0.7
CDC42SE2-208ENST00000505065 DUOX1Q9NRD9 1551 aa10.68□□□□□ -0.7
CDC42SE2-208ENST00000505065 UBN2Q6ZU65 1347 aa10.68□□□□□ -0.7
CDC42SE2-208ENST00000505065 G2E3Q7L622 706 aa10.68□□□□□ -0.7
CDC42SE2-208ENST00000505065 INTS3Q68E01 1043 aaKnown RBP10.68□□□□□ -0.7
CDC42SE2-208ENST00000505065 RTCBQ9Y3I0 505 aaKnown RBP10.68□□□□□ -0.7
CDC42SE2-208ENST00000505065 STK32BQ9NY57 414 aa10.67□□□□□ -0.7
CDC42SE2-208ENST00000505065 CDHR2Q9BYE9 1310 aa10.67□□□□□ -0.7
CDC42SE2-208ENST00000505065 POLRMTO00411 1230 aaKnown RBP10.67□□□□□ -0.7
CDC42SE2-208ENST00000505065 SLC10A5Q5PT55 438 aa10.67□□□□□ -0.7
CDC42SE2-208ENST00000505065 PHAXQ9H814 394 aaKnown RBP10.67□□□□□ -0.7
CDC42SE2-208ENST00000505065 CARMIL3Q8ND23 1372 aa10.67□□□□□ -0.7
CDC42SE2-208ENST00000505065 KIF16BQ96L93 1317 aa10.67□□□□□ -0.7
CDC42SE2-208ENST00000505065 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.67□□□□□ -0.7
CDC42SE2-208ENST00000505065 BEND3Q5T5X7 828 aa10.67□□□□□ -0.7
CDC42SE2-208ENST00000505065 KSR2Q6VAB6 950 aa10.67□□□□□ -0.7
CDC42SE2-208ENST00000505065 TTLL7Q6ZT98 887 aa10.67□□□□□ -0.7
CDC42SE2-208ENST00000505065 PLA2G12BQ9BX93 195 aa10.67□□□□□ -0.7
CDC42SE2-208ENST00000505065 SLX4Q8IY92 1834 aa10.66□□□□□ -0.7
CDC42SE2-208ENST00000505065 GNPATO15228 680 aa10.66□□□□□ -0.7
CDC42SE2-208ENST00000505065 FLIIQ13045 1269 aa10.66□□□□□ -0.7
CDC42SE2-208ENST00000505065 METTL22Q9BUU2 404 aaPredicted RBP10.66□□□□□ -0.7
CDC42SE2-208ENST00000505065 IGKV5-2P06315 115 aa10.66□□□□□ -0.7
CDC42SE2-208ENST00000505065 TIAM2Q8IVF5 1701 aa10.66□□□□□ -0.7
CDC42SE2-208ENST00000505065 AK7Q96M32 723 aa10.66□□□□□ -0.7
CDC42SE2-208ENST00000505065 NTSR2O95665 410 aa10.65□□□□□ -0.7
CDC42SE2-208ENST00000505065 TRAPPC3LQ5T215 181 aa10.65□□□□□ -0.7
CDC42SE2-208ENST00000505065 HLFQ16534 295 aa10.65□□□□□ -0.7
CDC42SE2-208ENST00000505065 DDR1Q08345 913 aa10.65□□□□□ -0.7
CDC42SE2-208ENST00000505065 TCIRG1Q13488 830 aa10.65□□□□□ -0.7
CDC42SE2-208ENST00000505065 XAGE3Q8WTP9 111 aa10.65□□□□□ -0.7
CDC42SE2-208ENST00000505065 PDGFDQ9GZP0 370 aaPredicted RBP10.65□□□□□ -0.7
CDC42SE2-208ENST00000505065 MTFR1LQ9H019 292 aa10.65□□□□□ -0.7
CDC42SE2-208ENST00000505065 ZBTB22O15209 634 aa10.64□□□□□ -0.71
CDC42SE2-208ENST00000505065 COPS6Q7L5N1 327 aa10.64□□□□□ -0.71
CDC42SE2-208ENST00000505065 DZIP3Q86Y13 1208 aaKnown RBP10.64□□□□□ -0.71
CDC42SE2-208ENST00000505065 LAS1LQ9Y4W2 734 aaKnown RBP10.64□□□□□ -0.71
CDC42SE2-208ENST00000505065 SLC4A2P04920 1241 aa10.63□□□□□ -0.71
CDC42SE2-208ENST00000505065 CRY2Q49AN0 593 aa10.63□□□□□ -0.71
CDC42SE2-208ENST00000505065 DOCK2Q92608 1830 aa10.63□□□□□ -0.71
CDC42SE2-208ENST00000505065 H7C1W4 665 aa10.63□□□□□ -0.71
CDC42SE2-208ENST00000505065 ALDH1L1O75891 902 aa10.63□□□□□ -0.71
CDC42SE2-208ENST00000505065 TBC1D9BQ66K14 1250 aa10.63□□□□□ -0.71
CDC42SE2-208ENST00000505065 ANKRD13DQ6ZTN6 518 aa10.63□□□□□ -0.71
CDC42SE2-208ENST00000505065 FKBP8Q14318 412 aa10.63□□□□□ -0.71
CDC42SE2-208ENST00000505065 NLRP10Q86W26 655 aa10.63□□□□□ -0.71
CDC42SE2-208ENST00000505065 ABCC12Q96J65 1359 aa10.62□□□□□ -0.71
CDC42SE2-208ENST00000505065 NEURL1BA8MQ27 555 aa10.62□□□□□ -0.71
CDC42SE2-208ENST00000505065 TRIM27P14373 513 aa10.62□□□□□ -0.71
CDC42SE2-208ENST00000505065 PDE3AQ14432 1141 aa10.62□□□□□ -0.71
CDC42SE2-208ENST00000505065 HSP90AB3PQ58FF7 597 aa10.62□□□□□ -0.71
CDC42SE2-208ENST00000505065 RCAN3Q9UKA8 241 aa10.62□□□□□ -0.71
CDC42SE2-208ENST00000505065 CCDC88AQ3V6T2 1871 aa10.62□□□□□ -0.71
CDC42SE2-208ENST00000505065 BCAR3O75815 825 aa10.62□□□□□ -0.71
CDC42SE2-208ENST00000505065 PARP10Q53GL7 1025 aa10.62□□□□□ -0.71
CDC42SE2-208ENST00000505065 NLGN1Q8N2Q7 840 aa10.62□□□□□ -0.71
CDC42SE2-208ENST00000505065 CCDC191Q8NCU4 936 aa10.62□□□□□ -0.71
CDC42SE2-208ENST00000505065 SRP68Q9UHB9 627 aaKnown RBP10.62□□□□□ -0.71
CDC42SE2-208ENST00000505065 NFIXQ14938 502 aa10.62□□□□□ -0.71
CDC42SE2-208ENST00000505065 USPL1Q5W0Q7 1092 aa10.62□□□□□ -0.71
CDC42SE2-208ENST00000505065 ATF7IPQ6VMQ6 1270 aa10.62□□□□□ -0.71
CDC42SE2-208ENST00000505065 MYH13Q9UKX3 1938 aa10.62□□□□□ -0.71
CDC42SE2-208ENST00000505065 LINS1Q8NG48 757 aa10.61□□□□□ -0.71
CDC42SE2-208ENST00000505065 SALL2Q9Y467 1007 aaPredicted RBP10.61□□□□□ -0.71
CDC42SE2-208ENST00000505065 RABL6Q3YEC7 729 aaPredicted RBP10.61□□□□□ -0.71
CDC42SE2-208ENST00000505065 NOB1Q9ULX3 412 aaKnown RBP10.61□□□□□ -0.71
CDC42SE2-208ENST00000505065 KAZALD1Q96I82 304 aa10.61□□□□□ -0.71
CDC42SE2-208ENST00000505065 SMIM5Q71RC9 77 aa10.61□□□□□ -0.71
CDC42SE2-208ENST00000505065 DNAAF4Q8WXU2 420 aa10.61□□□□□ -0.71
CDC42SE2-208ENST00000505065 SENP3-EIF4A1A0A087X0R7 540 aa10.6□□□□□ -0.71
CDC42SE2-208ENST00000505065 PCCAP05165 728 aaPredicted RBP10.6□□□□□ -0.71
CDC42SE2-208ENST00000505065 TFCP2L1Q9NZI6 479 aa10.6□□□□□ -0.71
CDC42SE2-208ENST00000505065 ANXA1P04083 346 aa10.6□□□□□ -0.71
CDC42SE2-208ENST00000505065 CANXP27824 592 aaKnown RBP10.6□□□□□ -0.71
CDC42SE2-208ENST00000505065 MTX1Q13505 466 aa10.6□□□□□ -0.71
CDC42SE2-208ENST00000505065 STK31Q9BXU1 1019 aa10.6□□□□□ -0.71
CDC42SE2-208ENST00000505065 MAST2Q6P0Q8 1798 aa10.6□□□□□ -0.71
CDC42SE2-208ENST00000505065 PIP4K2AP48426 406 aaPredicted RBP10.6□□□□□ -0.71
CDC42SE2-208ENST00000505065 API5Q9BZZ5 524 aaKnown RBP10.6□□□□□ -0.71
CDC42SE2-208ENST00000505065 MAP3K2Q9Y2U5 619 aa10.6□□□□□ -0.71
CDC42SE2-208ENST00000505065 CHD4Q14839 1912 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms