RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 YTHDC1Q96MU7 727 aaKnown RBP23.34■■□□□ 1.33
DDR1-254ENST00000504679 ZNF652Q9Y2D9 606 aa23.34■■□□□ 1.33
DDR1-254ENST00000504679 C4AP0C0L4 1744 aa23.33■■□□□ 1.33
DDR1-254ENST00000504679 RGL2O15211 777 aa23.33■■□□□ 1.33
DDR1-254ENST00000504679 FKBP8Q14318 412 aa23.33■■□□□ 1.33
DDR1-254ENST00000504679 MAP3K15Q6ZN16 1313 aa23.33■■□□□ 1.32
DDR1-254ENST00000504679 BCL2L12Q9HB09 334 aa23.32■■□□□ 1.32
DDR1-254ENST00000504679 ANKRD13DQ6ZTN6 518 aa23.31■■□□□ 1.32
DDR1-254ENST00000504679 ZBTB3Q9H5J0 574 aa23.31■■□□□ 1.32
DDR1-254ENST00000504679 PHAXQ9H814 394 aaKnown RBP23.31■■□□□ 1.32
DDR1-254ENST00000504679 DDX58O95786 925 aaKnown RBP23.3■■□□□ 1.32
DDR1-254ENST00000504679 TM4SF1P30408 202 aa23.3■■□□□ 1.32
DDR1-254ENST00000504679 PTGER2P43116 358 aa23.3■■□□□ 1.32
DDR1-254ENST00000504679 CACNA1FO60840 1977 aa23.3■■□□□ 1.32
DDR1-254ENST00000504679 MMP10P09238 476 aa23.29■■□□□ 1.32
DDR1-254ENST00000504679 HLFQ16534 295 aa23.29■■□□□ 1.32
DDR1-254ENST00000504679 PLBD2Q8NHP8 589 aa23.29■■□□□ 1.32
DDR1-254ENST00000504679 PARP3Q9Y6F1 533 aa23.29■■□□□ 1.32
DDR1-254ENST00000504679 ALDH1L2Q3SY69 923 aa23.28■■□□□ 1.32
DDR1-254ENST00000504679 GIGYF2Q6Y7W6 1299 aaKnown RBP23.28■■□□□ 1.32
DDR1-254ENST00000504679 RIC3Q7Z5B4 369 aa23.28■■□□□ 1.32
DDR1-254ENST00000504679 SETDB2Q96T68 719 aa23.28■■□□□ 1.32
DDR1-254ENST00000504679 SGIP1Q9BQI5 828 aa23.28■■□□□ 1.32
DDR1-254ENST00000504679 NFIXQ14938 502 aa23.27■■□□□ 1.32
DDR1-254ENST00000504679 TBC1D9BQ66K14 1250 aa23.27■■□□□ 1.32
DDR1-254ENST00000504679 BICDL1Q6ZP65 573 aa23.27■■□□□ 1.32
DDR1-254ENST00000504679 PPP1R1BQ9UD71 204 aaPredicted RBP23.27■■□□□ 1.32
DDR1-254ENST00000504679 HSP90AB3PQ58FF7 597 aa23.26■■□□□ 1.31
DDR1-254ENST00000504679 G2E3Q7L622 706 aa23.25■■□□□ 1.31
DDR1-254ENST00000504679 SSH1Q8WYL5 1049 aa23.25■■□□□ 1.31
DDR1-254ENST00000504679 NIP7Q9Y221 180 aaKnown RBP eCLIP23.25■■□□□ 1.31
DDR1-254ENST00000504679 COL24A1Q17RW2 1714 aa23.25■■□□□ 1.31
DDR1-254ENST00000504679 FLIIQ13045 1269 aa23.24■■□□□ 1.31
DDR1-254ENST00000504679 FKBP5Q13451 457 aaPredicted RBP23.23■■□□□ 1.31
DDR1-254ENST00000504679 TCIRG1Q13488 830 aa23.23■■□□□ 1.31
DDR1-254ENST00000504679 KSR2Q6VAB6 950 aa23.23■■□□□ 1.31
DDR1-254ENST00000504679 MRPL50Q8N5N7 158 aaKnown RBP23.23■■□□□ 1.31
DDR1-254ENST00000504679 NUP98P52948 1817 aa23.23■■□□□ 1.31
DDR1-254ENST00000504679 SCN7AQ01118 1682 aa23.22■■□□□ 1.31
DDR1-254ENST00000504679 BCORQ6W2J9 1755 aa23.22■■□□□ 1.31
DDR1-254ENST00000504679 POLRMTO00411 1230 aaKnown RBP23.22■■□□□ 1.31
DDR1-254ENST00000504679 SERPINB2P05120 415 aa23.22■■□□□ 1.31
DDR1-254ENST00000504679 SMC4Q9NTJ3 1288 aa23.22■■□□□ 1.31
DDR1-254ENST00000504679 PI4KAP2A4QPH2 592 aa23.21■■□□□ 1.31
DDR1-254ENST00000504679 RARSP54136 660 aaKnown RBP23.21■■□□□ 1.31
DDR1-254ENST00000504679 DDR1Q08345 913 aa23.21■■□□□ 1.31
DDR1-254ENST00000504679 ZNF34Q8IZ26 560 aa23.21■■□□□ 1.31
DDR1-254ENST00000504679 PI4KAP1Q8N8J0 262 aa23.21■■□□□ 1.31
DDR1-254ENST00000504679 MAP3K2Q9Y2U5 619 aa23.2■■□□□ 1.3
DDR1-254ENST00000504679 CARMIL3Q8ND23 1372 aa23.19■■□□□ 1.3
DDR1-254ENST00000504679 NPHP1O15259 732 aa23.19■■□□□ 1.3
DDR1-254ENST00000504679 GPTP24298 496 aa23.19■■□□□ 1.3
DDR1-254ENST00000504679 PARP10Q53GL7 1025 aa23.19■■□□□ 1.3
DDR1-254ENST00000504679 TPTE2Q6XPS3 522 aa23.19■■□□□ 1.3
DDR1-254ENST00000504679 BCL2L13Q9BXK5 485 aa23.19■■□□□ 1.3
DDR1-254ENST00000504679 PPP1R42Q7Z4L9 355 aa23.18■■□□□ 1.3
DDR1-254ENST00000504679 NBPF5PQ86XG9 351 aaPredicted RBP23.18■■□□□ 1.3
DDR1-254ENST00000504679 METTL22Q9BUU2 404 aaPredicted RBP23.18■■□□□ 1.3
DDR1-254ENST00000504679 LRP5O75197 1615 aa23.18■■□□□ 1.3
DDR1-254ENST00000504679 ATP10DQ9P241 1426 aa23.17■■□□□ 1.3
DDR1-254ENST00000504679 GTF2E1P29083 439 aaPredicted RBP23.17■■□□□ 1.3
DDR1-254ENST00000504679 BRPF1P55201 1214 aaPredicted RBP23.17■■□□□ 1.3
DDR1-254ENST00000504679 NEXNQ0ZGT2 675 aa23.17■■□□□ 1.3
DDR1-254ENST00000504679 MYD88Q99836 296 aa23.17■■□□□ 1.3
DDR1-254ENST00000504679 NYXQ9GZU5 481 aa23.17■■□□□ 1.3
DDR1-254ENST00000504679 PTPRCP08575 1304 aa23.16■■□□□ 1.3
DDR1-254ENST00000504679 FAM177BA6PVY3 158 aa23.16■■□□□ 1.3
DDR1-254ENST00000504679 TRIM28Q13263 835 aaKnown RBP23.16■■□□□ 1.3
DDR1-254ENST00000504679 KLHL34Q8N239 644 aa23.16■■□□□ 1.3
DDR1-254ENST00000504679 ISCA1Q9BUE6 129 aa23.16■■□□□ 1.3
DDR1-254ENST00000504679 CD2APQ9Y5K6 639 aa23.16■■□□□ 1.3
DDR1-254ENST00000504679 ATP5J2-PTCD1G3V325 749 aa23.15■■□□□ 1.3
DDR1-254ENST00000504679 DNAAF4Q8WXU2 420 aa23.15■■□□□ 1.3
DDR1-254ENST00000504679 ADCY9O60503 1353 aa23.14■■□□□ 1.3
DDR1-254ENST00000504679 SUSD4Q5VX71 490 aa23.14■■□□□ 1.29
DDR1-254ENST00000504679 NLRP10Q86W26 655 aa23.14■■□□□ 1.29
DDR1-254ENST00000504679 CNBD1Q8NA66 436 aa23.14■■□□□ 1.29
DDR1-254ENST00000504679 UTP14AQ9BVJ6 771 aaKnown RBP23.14■■□□□ 1.29
DDR1-254ENST00000504679 FHDC1Q9C0D6 1143 aaPredicted RBP23.14■■□□□ 1.29
DDR1-254ENST00000504679 NOB1Q9ULX3 412 aaKnown RBP23.14■■□□□ 1.29
DDR1-254ENST00000504679 UBN2Q6ZU65 1347 aa23.13■■□□□ 1.29
DDR1-254ENST00000504679 SRCAPQ6ZRS2 3230 aa23.13■■□□□ 1.29
DDR1-254ENST00000504679 IPO8O15397 1037 aaKnown RBP23.13■■□□□ 1.29
DDR1-254ENST00000504679 BCAR3O75815 825 aa23.13■■□□□ 1.29
DDR1-254ENST00000504679 ST5P78524 1137 aa23.13■■□□□ 1.29
DDR1-254ENST00000504679 ARFGEF2Q9Y6D5 1785 aa23.12■■□□□ 1.29
DDR1-254ENST00000504679 F6X3S4 739 aa23.12■■□□□ 1.29
DDR1-254ENST00000504679 PRR5LQ6MZQ0 368 aa23.12■■□□□ 1.29
DDR1-254ENST00000504679 CCDC191Q8NCU4 936 aa23.12■■□□□ 1.29
DDR1-254ENST00000504679 AFDNP55196 1824 aaKnown RBP23.12■■□□□ 1.29
DDR1-254ENST00000504679 KIF16BQ96L93 1317 aa23.11■■□□□ 1.29
DDR1-254ENST00000504679 SYT17Q9BSW7 474 aa23.11■■□□□ 1.29
DDR1-254ENST00000504679 TRMT112Q9UI30 125 aaKnown RBP23.11■■□□□ 1.29
DDR1-254ENST00000504679 ANKRD36CQ5JPF3 1778 aa23.1■■□□□ 1.29
DDR1-254ENST00000504679 SLC4A10Q6U841 1118 aa23.1■■□□□ 1.29
DDR1-254ENST00000504679 LINS1Q8NG48 757 aa23.1■■□□□ 1.29
DDR1-254ENST00000504679 ARHGAP45Q92619 1136 aa23.1■■□□□ 1.29
DDR1-254ENST00000504679 BRIP1Q9BX63 1249 aa23.1■■□□□ 1.29
DDR1-254ENST00000504679 API5Q9BZZ5 524 aaKnown RBP23.1■■□□□ 1.29
DDR1-254ENST00000504679 CWC25Q9NXE8 425 aaPredicted RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms