RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 MAP3K15Q6ZN16 1313 aa17.84■□□□□ 0.45
DDR1-253ENST00000504651 FLIIQ13045 1269 aa17.84■□□□□ 0.45
DDR1-253ENST00000504651 USPL1Q5W0Q7 1092 aa17.84■□□□□ 0.45
DDR1-253ENST00000504651 G2E3Q7L622 706 aa17.84■□□□□ 0.45
DDR1-253ENST00000504651 ZBTB3Q9H5J0 574 aa17.84■□□□□ 0.45
DDR1-253ENST00000504651 NARFQ9UHQ1 456 aa17.84■□□□□ 0.45
DDR1-253ENST00000504651 KIF16BQ96L93 1317 aa17.83■□□□□ 0.44
DDR1-253ENST00000504651 CAMTA2O94983 1202 aa17.83■□□□□ 0.44
DDR1-253ENST00000504651 DDX58O95786 925 aaKnown RBP17.83■□□□□ 0.44
DDR1-253ENST00000504651 FKBP5Q13451 457 aaPredicted RBP17.83■□□□□ 0.44
DDR1-253ENST00000504651 RCAN3Q9UKA8 241 aa17.83■□□□□ 0.44
DDR1-253ENST00000504651 PDGFDQ9GZP0 370 aaPredicted RBP17.82■□□□□ 0.44
DDR1-253ENST00000504651 AFDNP55196 1824 aaKnown RBP17.82■□□□□ 0.44
DDR1-253ENST00000504651 N4BP2Q86UW6 1770 aaPredicted RBP17.81■□□□□ 0.44
DDR1-253ENST00000504651 COL24A1Q17RW2 1714 aa17.81■□□□□ 0.44
DDR1-253ENST00000504651 BCAR3O75815 825 aa17.81■□□□□ 0.44
DDR1-253ENST00000504651 PLBD2Q8NHP8 589 aa17.81■□□□□ 0.44
DDR1-253ENST00000504651 ZNF652Q9Y2D9 606 aa17.81■□□□□ 0.44
DDR1-253ENST00000504651 ADCY9O60503 1353 aa17.8■□□□□ 0.44
DDR1-253ENST00000504651 PTPRCP08575 1304 aa17.8■□□□□ 0.44
DDR1-253ENST00000504651 ERVV-1B6SEH8 477 aa17.8■□□□□ 0.44
DDR1-253ENST00000504651 GYS1P13807 737 aa17.8■□□□□ 0.44
DDR1-253ENST00000504651 BRPF1P55201 1214 aaPredicted RBP17.8■□□□□ 0.44
DDR1-253ENST00000504651 ANKRD13DQ6ZTN6 518 aa17.8■□□□□ 0.44
DDR1-253ENST00000504651 RIC3Q7Z5B4 369 aa17.8■□□□□ 0.44
DDR1-253ENST00000504651 SLC16A10Q8TF71 515 aa17.8■□□□□ 0.44
DDR1-253ENST00000504651 MSL1Q68DK7 614 aa17.79■□□□□ 0.44
DDR1-253ENST00000504651 ATP10DQ9P241 1426 aa17.79■□□□□ 0.44
DDR1-253ENST00000504651 PI4KAP2A4QPH2 592 aa17.78■□□□□ 0.44
DDR1-253ENST00000504651 HLFQ16534 295 aa17.78■□□□□ 0.44
DDR1-253ENST00000504651 KSR2Q6VAB6 950 aa17.78■□□□□ 0.44
DDR1-253ENST00000504651 GIGYF2Q6Y7W6 1299 aaKnown RBP17.78■□□□□ 0.44
DDR1-253ENST00000504651 PI4KAP1Q8N8J0 262 aa17.78■□□□□ 0.44
DDR1-253ENST00000504651 FRAT1Q92837 279 aaPredicted RBP17.78■□□□□ 0.44
DDR1-253ENST00000504651 BCL2L12Q9HB09 334 aa17.78■□□□□ 0.44
DDR1-253ENST00000504651 NOB1Q9ULX3 412 aaKnown RBP17.78■□□□□ 0.44
DDR1-253ENST00000504651 MAP3K2Q9Y2U5 619 aa17.78■□□□□ 0.44
DDR1-253ENST00000504651 PXDNLA1KZ92 1463 aa17.77■□□□□ 0.44
DDR1-253ENST00000504651 RGL2O15211 777 aa17.77■□□□□ 0.44
DDR1-253ENST00000504651 ZBTB7AO95365 584 aa17.77■□□□□ 0.44
DDR1-253ENST00000504651 FKBP8Q14318 412 aa17.77■□□□□ 0.44
DDR1-253ENST00000504651 HSP90AB3PQ58FF7 597 aa17.77■□□□□ 0.44
DDR1-253ENST00000504651 CLEC4GQ6UXB4 293 aa17.77■□□□□ 0.44
DDR1-253ENST00000504651 NLGN1Q8N2Q7 840 aa17.76■□□□□ 0.43
DDR1-253ENST00000504651 DNAAF4Q8WXU2 420 aa17.76■□□□□ 0.43
DDR1-253ENST00000504651 MTFR1LQ9H019 292 aa17.76■□□□□ 0.43
DDR1-253ENST00000504651 F6X3S4 739 aa17.75■□□□□ 0.43
DDR1-253ENST00000504651 IPO8O15397 1037 aaKnown RBP17.75■□□□□ 0.43
DDR1-253ENST00000504651 TBC1D9BQ66K14 1250 aa17.75■□□□□ 0.43
DDR1-253ENST00000504651 BICDL1Q6ZP65 573 aa17.75■□□□□ 0.43
DDR1-253ENST00000504651 MYD88Q99836 296 aa17.75■□□□□ 0.43
DDR1-253ENST00000504651 API5Q9BZZ5 524 aaKnown RBP17.75■□□□□ 0.43
DDR1-253ENST00000504651 GPTP24298 496 aa17.74■□□□□ 0.43
DDR1-253ENST00000504651 NEXNQ0ZGT2 675 aa17.74■□□□□ 0.43
DDR1-253ENST00000504651 ZKSCAN2Q63HK3 967 aa17.74■□□□□ 0.43
DDR1-253ENST00000504651 METTL22Q9BUU2 404 aaPredicted RBP17.74■□□□□ 0.43
DDR1-253ENST00000504651 NIP7Q9Y221 180 aaKnown RBP eCLIP17.74■□□□□ 0.43
DDR1-253ENST00000504651 CARMIL3Q8ND23 1372 aa17.74■□□□□ 0.43
DDR1-253ENST00000504651 NRXN2Q9P2S2 1712 aa17.73■□□□□ 0.43
DDR1-253ENST00000504651 TCIRG1Q13488 830 aa17.73■□□□□ 0.43
DDR1-253ENST00000504651 NFIXQ14938 502 aa17.73■□□□□ 0.43
DDR1-253ENST00000504651 SLC4A10Q6U841 1118 aa17.73■□□□□ 0.43
DDR1-253ENST00000504651 ARHGAP45Q92619 1136 aa17.73■□□□□ 0.43
DDR1-253ENST00000504651 ATF5Q9Y2D1 282 aaPredicted RBP17.73■□□□□ 0.43
DDR1-253ENST00000504651 MMP10P09238 476 aa17.72■□□□□ 0.43
DDR1-253ENST00000504651 ATF7IPQ6VMQ6 1270 aa17.72■□□□□ 0.43
DDR1-253ENST00000504651 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.72■□□□□ 0.43
DDR1-253ENST00000504651 SETDB2Q96T68 719 aa17.72■□□□□ 0.43
DDR1-253ENST00000504651 UBN2Q6ZU65 1347 aa17.72■□□□□ 0.43
DDR1-253ENST00000504651 ATP5J2-PTCD1G3V325 749 aa17.71■□□□□ 0.43
DDR1-253ENST00000504651 CENPBP07199 599 aaPredicted RBP17.71■□□□□ 0.43
DDR1-253ENST00000504651 TRIM27P14373 513 aa17.71■□□□□ 0.43
DDR1-253ENST00000504651 POLD1P28340 1107 aa17.71■□□□□ 0.43
DDR1-253ENST00000504651 PARP10Q53GL7 1025 aa17.71■□□□□ 0.43
DDR1-253ENST00000504651 ZNF34Q8IZ26 560 aa17.71■□□□□ 0.43
DDR1-253ENST00000504651 PARP3Q9Y6F1 533 aa17.71■□□□□ 0.43
DDR1-253ENST00000504651 LAMB2P55268 1798 aa17.71■□□□□ 0.43
DDR1-253ENST00000504651 ABCC4O15439 1325 aa17.71■□□□□ 0.42
DDR1-253ENST00000504651 TM4SF1P30408 202 aa17.7■□□□□ 0.42
DDR1-253ENST00000504651 DDR1Q08345 913 aa17.7■□□□□ 0.42
DDR1-253ENST00000504651 ISCA1Q9BUE6 129 aa17.7■□□□□ 0.42
DDR1-253ENST00000504651 SPON1Q9HCB6 807 aa17.7■□□□□ 0.42
DDR1-253ENST00000504651 TNNQ9UQP3 1299 aa17.7■□□□□ 0.42
DDR1-253ENST00000504651 IBTKQ9P2D0 1353 aaPredicted RBP17.69■□□□□ 0.42
DDR1-253ENST00000504651 FAM177BA6PVY3 158 aa17.69■□□□□ 0.42
DDR1-253ENST00000504651 POLRMTO00411 1230 aaKnown RBP17.69■□□□□ 0.42
DDR1-253ENST00000504651 CWF19L2Q2TBE0 894 aaKnown RBP17.69■□□□□ 0.42
DDR1-253ENST00000504651 NLRP10Q86W26 655 aa17.69■□□□□ 0.42
DDR1-253ENST00000504651 FTSJ3Q8IY81 847 aaKnown RBP17.69■□□□□ 0.42
DDR1-253ENST00000504651 LINS1Q8NG48 757 aa17.69■□□□□ 0.42
DDR1-253ENST00000504651 CLUAP1Q96AJ1 413 aa17.69■□□□□ 0.42
DDR1-253ENST00000504651 LRP5O75197 1615 aa17.69■□□□□ 0.42
DDR1-253ENST00000504651 NEURL1BA8MQ27 555 aa17.68■□□□□ 0.42
DDR1-253ENST00000504651 NPHP1O15259 732 aa17.68■□□□□ 0.42
DDR1-253ENST00000504651 PLIN1O60240 522 aa17.68■□□□□ 0.42
DDR1-253ENST00000504651 SERPINB2P05120 415 aa17.68■□□□□ 0.42
DDR1-253ENST00000504651 IGKV5-2P06315 115 aa17.68■□□□□ 0.42
DDR1-253ENST00000504651 RRP1P56182 461 aaKnown RBP17.68■□□□□ 0.42
DDR1-253ENST00000504651 BEND3Q5T5X7 828 aa17.68■□□□□ 0.42
DDR1-253ENST00000504651 PPP1R42Q7Z4L9 355 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms