RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 ZNF652Q9Y2D9 606 aa18.63■□□□□ 0.57
HOXC9-202ENST00000504557 C2CD5Q86YS7 1000 aa18.62■□□□□ 0.57
HOXC9-202ENST00000504557 COL11A2P13942 1736 aaPredicted RBP18.61■□□□□ 0.57
HOXC9-202ENST00000504557 ANXA1P04083 346 aa18.61■□□□□ 0.57
HOXC9-202ENST00000504557 HLFQ16534 295 aa18.61■□□□□ 0.57
HOXC9-202ENST00000504557 DALRD3Q5D0E6 543 aaKnown RBP18.61■□□□□ 0.57
HOXC9-202ENST00000504557 PRR5LQ6MZQ0 368 aa18.61■□□□□ 0.57
HOXC9-202ENST00000504557 KIF6Q6ZMV9 814 aa18.61■□□□□ 0.57
HOXC9-202ENST00000504557 CNBD1Q8NA66 436 aa18.61■□□□□ 0.57
HOXC9-202ENST00000504557 NIP7Q9Y221 180 aaKnown RBP eCLIP18.61■□□□□ 0.57
HOXC9-202ENST00000504557 TTLL7Q6ZT98 887 aa18.6■□□□□ 0.57
HOXC9-202ENST00000504557 NBPF5PQ86XG9 351 aaPredicted RBP18.6■□□□□ 0.57
HOXC9-202ENST00000504557 ZNF526Q8TF50 670 aaPredicted RBP18.6■□□□□ 0.57
HOXC9-202ENST00000504557 ZBTB3Q9H5J0 574 aa18.6■□□□□ 0.57
HOXC9-202ENST00000504557 CHL1O00533 1208 aa18.59■□□□□ 0.57
HOXC9-202ENST00000504557 ZNF622Q969S3 477 aaKnown RBP eCLIP18.59■□□□□ 0.57
HOXC9-202ENST00000504557 BABAM1Q9NWV8 329 aa18.59■□□□□ 0.57
HOXC9-202ENST00000504557 CCDC88AQ3V6T2 1871 aa18.58■□□□□ 0.57
HOXC9-202ENST00000504557 H0YIN7 160 aa18.58■□□□□ 0.56
HOXC9-202ENST00000504557 ST5P78524 1137 aa18.58■□□□□ 0.56
HOXC9-202ENST00000504557 PROSER3Q2NL68 480 aa18.58■□□□□ 0.56
HOXC9-202ENST00000504557 ZNF219Q9P2Y4 722 aaPredicted RBP18.58■□□□□ 0.56
HOXC9-202ENST00000504557 CLEC4GQ6UXB4 293 aa18.57■□□□□ 0.56
HOXC9-202ENST00000504557 MAP3K15Q6ZN16 1313 aa18.56■□□□□ 0.56
HOXC9-202ENST00000504557 GPTP24298 496 aa18.56■□□□□ 0.56
HOXC9-202ENST00000504557 AIMP1Q12904 312 aaKnown RBP18.56■□□□□ 0.56
HOXC9-202ENST00000504557 MBIPQ9NS73 344 aa18.56■□□□□ 0.56
HOXC9-202ENST00000504557 SALL2Q9Y467 1007 aaPredicted RBP18.56■□□□□ 0.56
HOXC9-202ENST00000504557 SBF1O95248 1867 aa18.56■□□□□ 0.56
HOXC9-202ENST00000504557 ATP10DQ9P241 1426 aa18.56■□□□□ 0.56
HOXC9-202ENST00000504557 GTF2E1P29083 439 aaPredicted RBP18.55■□□□□ 0.56
HOXC9-202ENST00000504557 PDE6BP35913 854 aa18.55■□□□□ 0.56
HOXC9-202ENST00000504557 CFAP44Q96MT7 982 aa18.55■□□□□ 0.56
HOXC9-202ENST00000504557 BRIP1Q9BX63 1249 aa18.55■□□□□ 0.56
HOXC9-202ENST00000504557 ELL2O00472 640 aaPredicted RBP18.54■□□□□ 0.56
HOXC9-202ENST00000504557 HDGFL1Q5TGJ6 251 aa18.54■□□□□ 0.56
HOXC9-202ENST00000504557 TTLL6Q8N841 843 aa18.54■□□□□ 0.56
HOXC9-202ENST00000504557 SLX4Q8IY92 1834 aa18.53■□□□□ 0.56
HOXC9-202ENST00000504557 ERBB4Q15303 1308 aa18.53■□□□□ 0.56
HOXC9-202ENST00000504557 ANKRD36CQ5JPF3 1778 aa18.53■□□□□ 0.56
HOXC9-202ENST00000504557 PDIA6Q15084 440 aa18.53■□□□□ 0.56
HOXC9-202ENST00000504557 TPTE2Q6XPS3 522 aa18.53■□□□□ 0.56
HOXC9-202ENST00000504557 FAM9BQ8IZU0 186 aa18.53■□□□□ 0.56
HOXC9-202ENST00000504557 ERVV-1B6SEH8 477 aa18.52■□□□□ 0.56
HOXC9-202ENST00000504557 GNAI1P63096 354 aa18.52■□□□□ 0.56
HOXC9-202ENST00000504557 RASSF7Q02833 373 aa18.52■□□□□ 0.56
HOXC9-202ENST00000504557 CALD1Q05682 793 aaKnown RBP18.52■□□□□ 0.56
HOXC9-202ENST00000504557 DUSP27Q5VZP5 1158 aa18.52■□□□□ 0.56
HOXC9-202ENST00000504557 NUTM1Q86Y26 1132 aa18.52■□□□□ 0.56
HOXC9-202ENST00000504557 XAGE3Q8WTP9 111 aa18.52■□□□□ 0.56
HOXC9-202ENST00000504557 ZNF428Q96B54 188 aa18.52■□□□□ 0.56
HOXC9-202ENST00000504557 CHPF2Q9P2E5 772 aa18.52■□□□□ 0.56
HOXC9-202ENST00000504557 TNRC6CQ9HCJ0 1690 aaKnown RBP18.51■□□□□ 0.55
HOXC9-202ENST00000504557 COPS6Q7L5N1 327 aa18.51■□□□□ 0.55
HOXC9-202ENST00000504557 IFT57Q9NWB7 429 aa18.51■□□□□ 0.55
HOXC9-202ENST00000504557 C9orf131Q5VYM1 1079 aa18.5■□□□□ 0.55
HOXC9-202ENST00000504557 GPBP1L1Q9HC44 474 aaPredicted RBP18.5■□□□□ 0.55
HOXC9-202ENST00000504557 UBN2Q6ZU65 1347 aa18.49■□□□□ 0.55
HOXC9-202ENST00000504557 C21orf2O43822 256 aa18.49■□□□□ 0.55
HOXC9-202ENST00000504557 GIGYF2Q6Y7W6 1299 aaKnown RBP18.49■□□□□ 0.55
HOXC9-202ENST00000504557 LRP10Q7Z4F1 713 aa18.49■□□□□ 0.55
HOXC9-202ENST00000504557 TSR2Q969E8 191 aaKnown RBP18.49■□□□□ 0.55
HOXC9-202ENST00000504557 DDX21Q9NR30 783 aaKnown RBP eCLIP18.49■□□□□ 0.55
HOXC9-202ENST00000504557 RNF181Q9P0P0 153 aa18.49■□□□□ 0.55
HOXC9-202ENST00000504557 ADCY9O60503 1353 aa18.49■□□□□ 0.55
HOXC9-202ENST00000504557 ARFGEF2Q9Y6D5 1785 aa18.49■□□□□ 0.55
HOXC9-202ENST00000504557 ABCC12Q96J65 1359 aa18.48■□□□□ 0.55
HOXC9-202ENST00000504557 ZNF853P0CG23 659 aa18.48■□□□□ 0.55
HOXC9-202ENST00000504557 ERFEQ4G0M1 354 aa18.48■□□□□ 0.55
HOXC9-202ENST00000504557 RGL2O15211 777 aa18.47■□□□□ 0.55
HOXC9-202ENST00000504557 SRGNP10124 158 aa18.47■□□□□ 0.55
HOXC9-202ENST00000504557 SUSD4Q5VX71 490 aa18.47■□□□□ 0.55
HOXC9-202ENST00000504557 MASTLQ96GX5 879 aa18.47■□□□□ 0.55
HOXC9-202ENST00000504557 NYXQ9GZU5 481 aa18.47■□□□□ 0.55
HOXC9-202ENST00000504557 PDZRN3Q9UPQ7 1066 aa18.47■□□□□ 0.55
HOXC9-202ENST00000504557 FER1L6Q2WGJ9 1857 aa18.46■□□□□ 0.55
HOXC9-202ENST00000504557 PRPF40BQ6NWY9 871 aaKnown RBP18.46■□□□□ 0.55
HOXC9-202ENST00000504557 WWC1Q8IX03 1113 aa18.46■□□□□ 0.55
HOXC9-202ENST00000504557 C8orf58Q8NAV2 365 aa18.46■□□□□ 0.55
HOXC9-202ENST00000504557 CNKSR1Q969H4 720 aa18.46■□□□□ 0.55
HOXC9-202ENST00000504557 DBF4Q9UBU7 674 aaPredicted RBP18.46■□□□□ 0.55
HOXC9-202ENST00000504557 HOXB7P09629 217 aa18.45■□□□□ 0.54
HOXC9-202ENST00000504557 STYK1Q6J9G0 422 aa18.45■□□□□ 0.54
HOXC9-202ENST00000504557 ZNF34Q8IZ26 560 aa18.45■□□□□ 0.54
HOXC9-202ENST00000504557 TIAM2Q8IVF5 1701 aa18.45■□□□□ 0.54
HOXC9-202ENST00000504557 TCERG1O14776 1098 aaKnown RBP18.44■□□□□ 0.54
HOXC9-202ENST00000504557 NPR1P16066 1061 aa18.44■□□□□ 0.54
HOXC9-202ENST00000504557 PPP1R42Q7Z4L9 355 aa18.44■□□□□ 0.54
HOXC9-202ENST00000504557 LAMB2P55268 1798 aa18.43■□□□□ 0.54
HOXC9-202ENST00000504557 TSPYL6Q8N831 410 aa18.43■□□□□ 0.54
HOXC9-202ENST00000504557 NTSR2O95665 410 aa18.42■□□□□ 0.54
HOXC9-202ENST00000504557 PARP10Q53GL7 1025 aa18.42■□□□□ 0.54
HOXC9-202ENST00000504557 RPGRQ92834 1020 aaKnown RBP18.42■□□□□ 0.54
HOXC9-202ENST00000504557 UTP14AQ9BVJ6 771 aaKnown RBP18.42■□□□□ 0.54
HOXC9-202ENST00000504557 PHAXQ9H814 394 aaKnown RBP18.42■□□□□ 0.54
HOXC9-202ENST00000504557 HYPKQ9NX55 129 aa18.42■□□□□ 0.54
HOXC9-202ENST00000504557 DICER1Q9UPY3 1922 aaKnown RBP18.42■□□□□ 0.54
HOXC9-202ENST00000504557 NFKBIEO00221 500 aa18.41■□□□□ 0.54
HOXC9-202ENST00000504557 CCDC27Q2M243 656 aa18.41■□□□□ 0.54
HOXC9-202ENST00000504557 HSP90AB3PQ58FF7 597 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms