RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 PRAMEF22A3QJZ6 481 aa12□□□□□ -0.49
COL1A1-210ENST00000504289 APBB1O00213 710 aa12□□□□□ -0.49
COL1A1-210ENST00000504289 ANAPC15P60006 121 aa12□□□□□ -0.49
COL1A1-210ENST00000504289 NFKBIBQ15653 356 aa12□□□□□ -0.49
COL1A1-210ENST00000504289 CLASRPQ8N2M8 674 aaKnown RBP12□□□□□ -0.49
COL1A1-210ENST00000504289 USP16Q9Y5T5 823 aa12□□□□□ -0.49
COL1A1-210ENST00000504289 LRP6O75581 1613 aa12□□□□□ -0.49
COL1A1-210ENST00000504289 GLRX3O76003 335 aaKnown RBP11.99□□□□□ -0.49
COL1A1-210ENST00000504289 IGKV5-2P06315 115 aa11.99□□□□□ -0.49
COL1A1-210ENST00000504289 MCCP23508 829 aa11.99□□□□□ -0.49
COL1A1-210ENST00000504289 NBR1Q14596 966 aa11.99□□□□□ -0.49
COL1A1-210ENST00000504289 TICAM2Q86XR7 235 aa11.99□□□□□ -0.49
COL1A1-210ENST00000504289 DISP2A7MBM2 1401 aa11.99□□□□□ -0.49
COL1A1-210ENST00000504289 KCPQ6ZWJ8 1503 aa11.99□□□□□ -0.49
COL1A1-210ENST00000504289 SHANK3Q9BYB0 1731 aa11.99□□□□□ -0.49
COL1A1-210ENST00000504289 PLCH1Q4KWH8 1693 aa11.98□□□□□ -0.49
COL1A1-210ENST00000504289 CWF19L2Q2TBE0 894 aaKnown RBP11.98□□□□□ -0.49
COL1A1-210ENST00000504289 RABL6Q3YEC7 729 aaPredicted RBP11.98□□□□□ -0.49
COL1A1-210ENST00000504289 ESYT1Q9BSJ8 1104 aa11.98□□□□□ -0.49
COL1A1-210ENST00000504289 THRAP3Q9Y2W1 955 aaKnown RBP11.98□□□□□ -0.49
COL1A1-210ENST00000504289 K7ELQ4 463 aaPredicted RBP11.97□□□□□ -0.49
COL1A1-210ENST00000504289 MYL6BP14649 208 aa11.97□□□□□ -0.49
COL1A1-210ENST00000504289 CHMLP26374 656 aa11.97□□□□□ -0.49
COL1A1-210ENST00000504289 MCM2P49736 904 aa11.97□□□□□ -0.49
COL1A1-210ENST00000504289 AIMP1Q12904 312 aaKnown RBP11.97□□□□□ -0.49
COL1A1-210ENST00000504289 G3BP1Q13283 466 aaKnown RBP eCLIP11.97□□□□□ -0.49
COL1A1-210ENST00000504289 OS9Q13438 667 aaPredicted RBP11.97□□□□□ -0.49
COL1A1-210ENST00000504289 CNTROBQ8N137 903 aa11.97□□□□□ -0.49
COL1A1-210ENST00000504289 PI4K2BQ8TCG2 481 aa11.97□□□□□ -0.49
COL1A1-210ENST00000504289 SUCLG2Q96I99 432 aa11.97□□□□□ -0.49
COL1A1-210ENST00000504289 COPRSQ9NQ92 184 aa11.97□□□□□ -0.49
COL1A1-210ENST00000504289 STRN4Q9NRL3 753 aa11.97□□□□□ -0.49
COL1A1-210ENST00000504289 TMOD3Q9NYL9 352 aa11.97□□□□□ -0.49
COL1A1-210ENST00000504289 ROBO1Q9Y6N7 1651 aa11.97□□□□□ -0.49
COL1A1-210ENST00000504289 HIP1O00291 1037 aa11.96□□□□□ -0.49
COL1A1-210ENST00000504289 ST18O60284 1047 aa11.96□□□□□ -0.49
COL1A1-210ENST00000504289 DDIT3P35638 169 aa11.96□□□□□ -0.49
COL1A1-210ENST00000504289 TRIM28Q13263 835 aaKnown RBP11.96□□□□□ -0.49
COL1A1-210ENST00000504289 CCDC191Q8NCU4 936 aa11.96□□□□□ -0.49
COL1A1-210ENST00000504289 KAZALD1Q96I82 304 aa11.96□□□□□ -0.49
COL1A1-210ENST00000504289 MYD88Q99836 296 aa11.96□□□□□ -0.49
COL1A1-210ENST00000504289 BICC1Q9H694 974 aaKnown RBP11.96□□□□□ -0.49
COL1A1-210ENST00000504289 ECHDC1Q9NTX5 307 aa11.96□□□□□ -0.49
COL1A1-210ENST00000504289 BTG4Q9NY30 223 aa11.96□□□□□ -0.49
COL1A1-210ENST00000504289 H7C1W4 665 aa11.95□□□□□ -0.5
COL1A1-210ENST00000504289 RUFY2Q8WXA3 655 aa11.95□□□□□ -0.5
COL1A1-210ENST00000504289 IL1RAPL2Q9NP60 686 aa11.95□□□□□ -0.5
COL1A1-210ENST00000504289 ATG3Q9NT62 314 aa11.95□□□□□ -0.5
COL1A1-210ENST00000504289 ARFGEF2Q9Y6D5 1785 aa11.95□□□□□ -0.5
COL1A1-210ENST00000504289 TRIM6-TRIM34B2RNG4 842 aa11.94□□□□□ -0.5
COL1A1-210ENST00000504289 NBPF26B4DH59 902 aa11.94□□□□□ -0.5
COL1A1-210ENST00000504289 STARD3NLO95772 234 aa11.94□□□□□ -0.5
COL1A1-210ENST00000504289 IFIT2P09913 472 aaKnown RBP11.94□□□□□ -0.5
COL1A1-210ENST00000504289 PTMSP20962 102 aa11.94□□□□□ -0.5
COL1A1-210ENST00000504289 NBPF14Q5TI25 921 aa11.94□□□□□ -0.5
COL1A1-210ENST00000504289 NBPF10Q6P3W6 841 aaKnown RBP11.94□□□□□ -0.5
COL1A1-210ENST00000504289 NBPF15Q8N660 670 aa11.94□□□□□ -0.5
COL1A1-210ENST00000504289 DDX54Q8TDD1 881 aaKnown RBP11.94□□□□□ -0.5
COL1A1-210ENST00000504289 FBXO3Q9UK99 471 aa11.94□□□□□ -0.5
COL1A1-210ENST00000504289 EXOC5O00471 708 aa11.93□□□□□ -0.5
COL1A1-210ENST00000504289 CASP7P55210 303 aa11.93□□□□□ -0.5
COL1A1-210ENST00000504289 RILPL2Q969X0 211 aa11.93□□□□□ -0.5
COL1A1-210ENST00000504289 EVI5LQ96CN4 794 aa11.93□□□□□ -0.5
COL1A1-210ENST00000504289 CWC22Q9HCG8 908 aaKnown RBP11.93□□□□□ -0.5
COL1A1-210ENST00000504289 GPR108Q9NPR9 543 aa11.93□□□□□ -0.5
COL1A1-210ENST00000504289 CWC25Q9NXE8 425 aaPredicted RBP11.93□□□□□ -0.5
COL1A1-210ENST00000504289 A0A087WZG4 1122 aa11.92□□□□□ -0.5
COL1A1-210ENST00000504289 PIP4K2BP78356 416 aa11.92□□□□□ -0.5
COL1A1-210ENST00000504289 NUTM1Q86Y26 1132 aa11.92□□□□□ -0.5
COL1A1-210ENST00000504289 SLKQ9H2G2 1235 aaPredicted RBP11.92□□□□□ -0.5
COL1A1-210ENST00000504289 COL16A1Q07092 1604 aaPredicted RBP11.92□□□□□ -0.5
COL1A1-210ENST00000504289 BCL9O00512 1426 aa11.92□□□□□ -0.5
COL1A1-210ENST00000504289 RFX7Q2KHR2 1363 aa11.92□□□□□ -0.5
COL1A1-210ENST00000504289 NUP188Q5SRE5 1749 aa11.91□□□□□ -0.5
COL1A1-210ENST00000504289 RAD50Q92878 1312 aa11.91□□□□□ -0.5
COL1A1-210ENST00000504289 SGSM2O43147 1006 aa11.91□□□□□ -0.5
COL1A1-210ENST00000504289 TOM1O60784 492 aa11.91□□□□□ -0.5
COL1A1-210ENST00000504289 SASH1O94885 1247 aa11.91□□□□□ -0.5
COL1A1-210ENST00000504289 RFX5P48382 616 aaPredicted RBP11.91□□□□□ -0.5
COL1A1-210ENST00000504289 HSP90AB3PQ58FF7 597 aa11.91□□□□□ -0.5
COL1A1-210ENST00000504289 AK9Q5TCS8 1911 aa11.91□□□□□ -0.5
COL1A1-210ENST00000504289 TOGARAM1Q9Y4F4 1720 aa11.91□□□□□ -0.5
COL1A1-210ENST00000504289 AFDNP55196 1824 aaKnown RBP11.9□□□□□ -0.5
COL1A1-210ENST00000504289 FRAT2O75474 233 aaPredicted RBP11.9□□□□□ -0.5
COL1A1-210ENST00000504289 HSP90AA1P07900 732 aaKnown RBP11.9□□□□□ -0.5
COL1A1-210ENST00000504289 TCIRG1Q13488 830 aa11.9□□□□□ -0.5
COL1A1-210ENST00000504289 CLEC17AQ6ZS10 378 aa11.9□□□□□ -0.5
COL1A1-210ENST00000504289 KIAA1211Q6ZU35 1233 aa11.9□□□□□ -0.5
COL1A1-210ENST00000504289 UBE3BQ7Z3V4 1068 aa11.9□□□□□ -0.5
COL1A1-210ENST00000504289 AACSQ86V21 672 aa11.9□□□□□ -0.5
COL1A1-210ENST00000504289 PIGBQ92521 554 aa11.9□□□□□ -0.5
COL1A1-210ENST00000504289 ISCA1Q9BUE6 129 aa11.9□□□□□ -0.5
COL1A1-210ENST00000504289 SNRKQ9NRH2 765 aa11.9□□□□□ -0.5
COL1A1-210ENST00000504289 WNK3Q9BYP7 1800 aa11.9□□□□□ -0.5
COL1A1-210ENST00000504289 NWD2Q9ULI1 1742 aa11.89□□□□□ -0.51
COL1A1-210ENST00000504289 DDX11L8A8MPP1 907 aa11.89□□□□□ -0.51
COL1A1-210ENST00000504289 PTCD1O75127 700 aaKnown RBP11.89□□□□□ -0.51
COL1A1-210ENST00000504289 CIAO1O76071 339 aa11.89□□□□□ -0.51
COL1A1-210ENST00000504289 HSPA4P34932 840 aa11.89□□□□□ -0.51
COL1A1-210ENST00000504289 NUCB2P80303 420 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms