RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 CAMTA2O94983 1202 aa23.34■■□□□ 1.33
DDR1-252ENST00000504152 CLEC4GQ6UXB4 293 aa23.34■■□□□ 1.33
DDR1-252ENST00000504152 YTHDC1Q96MU7 727 aaKnown RBP23.34■■□□□ 1.33
DDR1-252ENST00000504152 ZNF652Q9Y2D9 606 aa23.34■■□□□ 1.33
DDR1-252ENST00000504152 C4AP0C0L4 1744 aa23.33■■□□□ 1.33
DDR1-252ENST00000504152 RGL2O15211 777 aa23.33■■□□□ 1.33
DDR1-252ENST00000504152 FKBP8Q14318 412 aa23.33■■□□□ 1.33
DDR1-252ENST00000504152 MAP3K15Q6ZN16 1313 aa23.33■■□□□ 1.32
DDR1-252ENST00000504152 BCL2L12Q9HB09 334 aa23.32■■□□□ 1.32
DDR1-252ENST00000504152 ANKRD13DQ6ZTN6 518 aa23.31■■□□□ 1.32
DDR1-252ENST00000504152 ZBTB3Q9H5J0 574 aa23.31■■□□□ 1.32
DDR1-252ENST00000504152 PHAXQ9H814 394 aaKnown RBP23.31■■□□□ 1.32
DDR1-252ENST00000504152 PPP1R1BQ9UD71 204 aaPredicted RBP23.31■■□□□ 1.32
DDR1-252ENST00000504152 DDX58O95786 925 aaKnown RBP23.3■■□□□ 1.32
DDR1-252ENST00000504152 TM4SF1P30408 202 aa23.3■■□□□ 1.32
DDR1-252ENST00000504152 PTGER2P43116 358 aa23.3■■□□□ 1.32
DDR1-252ENST00000504152 CACNA1FO60840 1977 aa23.3■■□□□ 1.32
DDR1-252ENST00000504152 MMP10P09238 476 aa23.29■■□□□ 1.32
DDR1-252ENST00000504152 HLFQ16534 295 aa23.29■■□□□ 1.32
DDR1-252ENST00000504152 PLBD2Q8NHP8 589 aa23.29■■□□□ 1.32
DDR1-252ENST00000504152 PARP3Q9Y6F1 533 aa23.29■■□□□ 1.32
DDR1-252ENST00000504152 ALDH1L2Q3SY69 923 aa23.28■■□□□ 1.32
DDR1-252ENST00000504152 GIGYF2Q6Y7W6 1299 aaKnown RBP23.28■■□□□ 1.32
DDR1-252ENST00000504152 RIC3Q7Z5B4 369 aa23.28■■□□□ 1.32
DDR1-252ENST00000504152 SETDB2Q96T68 719 aa23.28■■□□□ 1.32
DDR1-252ENST00000504152 SGIP1Q9BQI5 828 aa23.28■■□□□ 1.32
DDR1-252ENST00000504152 NFIXQ14938 502 aa23.27■■□□□ 1.32
DDR1-252ENST00000504152 TBC1D9BQ66K14 1250 aa23.27■■□□□ 1.32
DDR1-252ENST00000504152 BICDL1Q6ZP65 573 aa23.27■■□□□ 1.32
DDR1-252ENST00000504152 HSP90AB3PQ58FF7 597 aa23.26■■□□□ 1.31
DDR1-252ENST00000504152 G2E3Q7L622 706 aa23.25■■□□□ 1.31
DDR1-252ENST00000504152 SSH1Q8WYL5 1049 aa23.25■■□□□ 1.31
DDR1-252ENST00000504152 NIP7Q9Y221 180 aaKnown RBP eCLIP23.25■■□□□ 1.31
DDR1-252ENST00000504152 COL24A1Q17RW2 1714 aa23.25■■□□□ 1.31
DDR1-252ENST00000504152 FLIIQ13045 1269 aa23.24■■□□□ 1.31
DDR1-252ENST00000504152 YY1P25490 414 aa23.23■■□□□ 1.31
DDR1-252ENST00000504152 FKBP5Q13451 457 aaPredicted RBP23.23■■□□□ 1.31
DDR1-252ENST00000504152 TCIRG1Q13488 830 aa23.23■■□□□ 1.31
DDR1-252ENST00000504152 KSR2Q6VAB6 950 aa23.23■■□□□ 1.31
DDR1-252ENST00000504152 MRPL50Q8N5N7 158 aaKnown RBP23.23■■□□□ 1.31
DDR1-252ENST00000504152 NUP98P52948 1817 aa23.23■■□□□ 1.31
DDR1-252ENST00000504152 SCN7AQ01118 1682 aa23.22■■□□□ 1.31
DDR1-252ENST00000504152 BCORQ6W2J9 1755 aa23.22■■□□□ 1.31
DDR1-252ENST00000504152 POLRMTO00411 1230 aaKnown RBP23.22■■□□□ 1.31
DDR1-252ENST00000504152 SERPINB2P05120 415 aa23.22■■□□□ 1.31
DDR1-252ENST00000504152 SMC4Q9NTJ3 1288 aa23.22■■□□□ 1.31
DDR1-252ENST00000504152 PI4KAP2A4QPH2 592 aa23.21■■□□□ 1.31
DDR1-252ENST00000504152 RARSP54136 660 aaKnown RBP23.21■■□□□ 1.31
DDR1-252ENST00000504152 DDR1Q08345 913 aa23.21■■□□□ 1.31
DDR1-252ENST00000504152 ZNF34Q8IZ26 560 aa23.21■■□□□ 1.31
DDR1-252ENST00000504152 PI4KAP1Q8N8J0 262 aa23.21■■□□□ 1.31
DDR1-252ENST00000504152 MAP3K2Q9Y2U5 619 aa23.2■■□□□ 1.3
DDR1-252ENST00000504152 CARMIL3Q8ND23 1372 aa23.19■■□□□ 1.3
DDR1-252ENST00000504152 NPHP1O15259 732 aa23.19■■□□□ 1.3
DDR1-252ENST00000504152 GPTP24298 496 aa23.19■■□□□ 1.3
DDR1-252ENST00000504152 PARP10Q53GL7 1025 aa23.19■■□□□ 1.3
DDR1-252ENST00000504152 TPTE2Q6XPS3 522 aa23.19■■□□□ 1.3
DDR1-252ENST00000504152 BCL2L13Q9BXK5 485 aa23.19■■□□□ 1.3
DDR1-252ENST00000504152 PPP1R42Q7Z4L9 355 aa23.18■■□□□ 1.3
DDR1-252ENST00000504152 NBPF5PQ86XG9 351 aaPredicted RBP23.18■■□□□ 1.3
DDR1-252ENST00000504152 METTL22Q9BUU2 404 aaPredicted RBP23.18■■□□□ 1.3
DDR1-252ENST00000504152 ATP10DQ9P241 1426 aa23.17■■□□□ 1.3
DDR1-252ENST00000504152 GTF2E1P29083 439 aaPredicted RBP23.17■■□□□ 1.3
DDR1-252ENST00000504152 BRPF1P55201 1214 aaPredicted RBP23.17■■□□□ 1.3
DDR1-252ENST00000504152 NEXNQ0ZGT2 675 aa23.17■■□□□ 1.3
DDR1-252ENST00000504152 MYD88Q99836 296 aa23.17■■□□□ 1.3
DDR1-252ENST00000504152 NYXQ9GZU5 481 aa23.17■■□□□ 1.3
DDR1-252ENST00000504152 PTPRCP08575 1304 aa23.16■■□□□ 1.3
DDR1-252ENST00000504152 FAM177BA6PVY3 158 aa23.16■■□□□ 1.3
DDR1-252ENST00000504152 TRIM28Q13263 835 aaKnown RBP23.16■■□□□ 1.3
DDR1-252ENST00000504152 KLHL34Q8N239 644 aa23.16■■□□□ 1.3
DDR1-252ENST00000504152 ISCA1Q9BUE6 129 aa23.16■■□□□ 1.3
DDR1-252ENST00000504152 CD2APQ9Y5K6 639 aa23.16■■□□□ 1.3
DDR1-252ENST00000504152 ATP5J2-PTCD1G3V325 749 aa23.15■■□□□ 1.3
DDR1-252ENST00000504152 DNAAF4Q8WXU2 420 aa23.15■■□□□ 1.3
DDR1-252ENST00000504152 ADCY9O60503 1353 aa23.14■■□□□ 1.3
DDR1-252ENST00000504152 SUSD4Q5VX71 490 aa23.14■■□□□ 1.29
DDR1-252ENST00000504152 NLRP10Q86W26 655 aa23.14■■□□□ 1.29
DDR1-252ENST00000504152 CNBD1Q8NA66 436 aa23.14■■□□□ 1.29
DDR1-252ENST00000504152 UTP14AQ9BVJ6 771 aaKnown RBP23.14■■□□□ 1.29
DDR1-252ENST00000504152 FHDC1Q9C0D6 1143 aaPredicted RBP23.14■■□□□ 1.29
DDR1-252ENST00000504152 NOB1Q9ULX3 412 aaKnown RBP23.14■■□□□ 1.29
DDR1-252ENST00000504152 UBN2Q6ZU65 1347 aa23.13■■□□□ 1.29
DDR1-252ENST00000504152 IPO8O15397 1037 aaKnown RBP23.13■■□□□ 1.29
DDR1-252ENST00000504152 BCAR3O75815 825 aa23.13■■□□□ 1.29
DDR1-252ENST00000504152 ST5P78524 1137 aa23.13■■□□□ 1.29
DDR1-252ENST00000504152 ARFGEF2Q9Y6D5 1785 aa23.12■■□□□ 1.29
DDR1-252ENST00000504152 F6X3S4 739 aa23.12■■□□□ 1.29
DDR1-252ENST00000504152 PRR5LQ6MZQ0 368 aa23.12■■□□□ 1.29
DDR1-252ENST00000504152 CCDC191Q8NCU4 936 aa23.12■■□□□ 1.29
DDR1-252ENST00000504152 AFDNP55196 1824 aaKnown RBP23.12■■□□□ 1.29
DDR1-252ENST00000504152 KIF16BQ96L93 1317 aa23.11■■□□□ 1.29
DDR1-252ENST00000504152 SYT17Q9BSW7 474 aa23.11■■□□□ 1.29
DDR1-252ENST00000504152 TRMT112Q9UI30 125 aaKnown RBP23.11■■□□□ 1.29
DDR1-252ENST00000504152 ANKRD36CQ5JPF3 1778 aa23.1■■□□□ 1.29
DDR1-252ENST00000504152 SLC4A10Q6U841 1118 aa23.1■■□□□ 1.29
DDR1-252ENST00000504152 LINS1Q8NG48 757 aa23.1■■□□□ 1.29
DDR1-252ENST00000504152 ARHGAP45Q92619 1136 aa23.1■■□□□ 1.29
DDR1-252ENST00000504152 BRIP1Q9BX63 1249 aa23.1■■□□□ 1.29
DDR1-252ENST00000504152 API5Q9BZZ5 524 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms