RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 ARXQ96QS3 562 aa5.36□□□□□ -1.55
USP46-205ENST00000504078 EYA1Q99502 592 aa5.36□□□□□ -1.55
USP46-205ENST00000504078 MTFR1LQ9H019 292 aa5.36□□□□□ -1.55
USP46-205ENST00000504078 SENP2Q9HC62 589 aa5.36□□□□□ -1.55
USP46-205ENST00000504078 POLR3AO14802 1390 aaPredicted RBP5.36□□□□□ -1.55
USP46-205ENST00000504078 ATP10DQ9P241 1426 aa5.36□□□□□ -1.55
USP46-205ENST00000504078 ABCC6O95255 1503 aa5.36□□□□□ -1.55
USP46-205ENST00000504078 TRPM1Q7Z4N2 1603 aa5.35□□□□□ -1.55
USP46-205ENST00000504078 NFAT5O94916 1531 aa5.35□□□□□ -1.55
USP46-205ENST00000504078 USP6P35125 1406 aa5.35□□□□□ -1.55
USP46-205ENST00000504078 GRXCR2A6NFK2 248 aa5.35□□□□□ -1.55
USP46-205ENST00000504078 NR1I2O75469 434 aa5.35□□□□□ -1.55
USP46-205ENST00000504078 CSB-PGBD3P0DP91 1061 aa5.35□□□□□ -1.55
USP46-205ENST00000504078 SLC15A2Q16348 729 aa5.35□□□□□ -1.55
USP46-205ENST00000504078 PLA2G2CQ5R387 149 aa5.35□□□□□ -1.55
USP46-205ENST00000504078 LCE2CQ5TA81 110 aa5.35□□□□□ -1.55
USP46-205ENST00000504078 MSL1Q68DK7 614 aa5.35□□□□□ -1.55
USP46-205ENST00000504078 SLC16A10Q8TF71 515 aa5.35□□□□□ -1.55
USP46-205ENST00000504078 CDK19Q9BWU1 502 aa5.35□□□□□ -1.55
USP46-205ENST00000504078 BRD4O60885 1362 aaPredicted RBP5.34□□□□□ -1.55
USP46-205ENST00000504078 GCP02774 474 aa5.34□□□□□ -1.55
USP46-205ENST00000504078 YBX3P16989 372 aaKnown RBP eCLIP5.34□□□□□ -1.55
USP46-205ENST00000504078 SRPK2P78362 688 aaKnown RBP5.34□□□□□ -1.55
USP46-205ENST00000504078 DCAF11Q8TEB1 546 aa5.34□□□□□ -1.55
USP46-205ENST00000504078 TRIM47Q96LD4 638 aa5.34□□□□□ -1.55
USP46-205ENST00000504078 CDHR5Q9HBB8 845 aa5.34□□□□□ -1.55
USP46-205ENST00000504078 THRAP3Q9Y2W1 955 aaKnown RBP5.34□□□□□ -1.55
USP46-205ENST00000504078 AATKQ6ZMQ8 1374 aa5.33□□□□□ -1.56
USP46-205ENST00000504078 WDR17Q8IZU2 1322 aa5.33□□□□□ -1.56
USP46-205ENST00000504078 PLSCR1O15162 318 aa5.33□□□□□ -1.56
USP46-205ENST00000504078 OSBPP22059 807 aa5.33□□□□□ -1.56
USP46-205ENST00000504078 PADI6Q6TGC4 694 aa5.33□□□□□ -1.56
USP46-205ENST00000504078 ZSCAN1Q8NBB4 408 aa5.33□□□□□ -1.56
USP46-205ENST00000504078 KIFC2Q96AC6 838 aa5.33□□□□□ -1.56
USP46-205ENST00000504078 ATP13A2Q9NQ11 1180 aa5.33□□□□□ -1.56
USP46-205ENST00000504078 LTN1O94822 1766 aa5.33□□□□□ -1.56
USP46-205ENST00000504078 QSER1Q2KHR3 1735 aa5.33□□□□□ -1.56
USP46-205ENST00000504078 CEP350Q5VT06 3117 aa5.33□□□□□ -1.56
USP46-205ENST00000504078 MAP3K5Q99683 1374 aa5.32□□□□□ -1.56
USP46-205ENST00000504078 RAB3GAP2Q9H2M9 1393 aa5.32□□□□□ -1.56
USP46-205ENST00000504078 GOLGB1Q14789 3259 aaKnown RBP5.32□□□□□ -1.56
USP46-205ENST00000504078 SNRPBP14678 240 aaKnown RBP5.32□□□□□ -1.56
USP46-205ENST00000504078 NLRP13Q86W25 1043 aa5.32□□□□□ -1.56
USP46-205ENST00000504078 NPDC1Q9NQX5 325 aaPredicted RBP5.32□□□□□ -1.56
USP46-205ENST00000504078 LRRC4BQ9NT99 713 aa5.32□□□□□ -1.56
USP46-205ENST00000504078 ARIH1Q9Y4X5 557 aaPredicted RBP5.32□□□□□ -1.56
USP46-205ENST00000504078 COL24A1Q17RW2 1714 aa5.31□□□□□ -1.56
USP46-205ENST00000504078 PNPLA7Q6ZV29 1317 aa5.31□□□□□ -1.56
USP46-205ENST00000504078 DNAJB2P25686 324 aa5.31□□□□□ -1.56
USP46-205ENST00000504078 E2F4Q16254 413 aa5.31□□□□□ -1.56
USP46-205ENST00000504078 WDR70Q9NW82 654 aa5.31□□□□□ -1.56
USP46-205ENST00000504078 MON2Q7Z3U7 1717 aa5.31□□□□□ -1.56
USP46-205ENST00000504078 BCL9O00512 1426 aa5.31□□□□□ -1.56
USP46-205ENST00000504078 PLEKHG3A1L390 1219 aa5.3□□□□□ -1.56
USP46-205ENST00000504078 TTC24A2A3L6 582 aaPredicted RBP5.3□□□□□ -1.56
USP46-205ENST00000504078 LORP23490 312 aaPredicted RBP5.3□□□□□ -1.56
USP46-205ENST00000504078 POLD1P28340 1107 aa5.3□□□□□ -1.56
USP46-205ENST00000504078 NBPF1Q3BBV0 1214 aa5.3□□□□□ -1.56
USP46-205ENST00000504078 SCUBE3Q8IX30 993 aa5.3□□□□□ -1.56
USP46-205ENST00000504078 NPAS3Q8IXF0 933 aa5.3□□□□□ -1.56
USP46-205ENST00000504078 SYTL4Q96C24 671 aaPredicted RBP5.3□□□□□ -1.56
USP46-205ENST00000504078 LY75O60449 1722 aa5.3□□□□□ -1.56
USP46-205ENST00000504078 KIAA1210Q9ULL0 1709 aa5.3□□□□□ -1.56
USP46-205ENST00000504078 TOGARAM1Q9Y4F4 1720 aa5.3□□□□□ -1.56
USP46-205ENST00000504078 C5P01031 1676 aa5.3□□□□□ -1.56
USP46-205ENST00000504078 ADCY9O60503 1353 aa5.29□□□□□ -1.56
USP46-205ENST00000504078 RGPD2P0DJD1 1756 aa5.29□□□□□ -1.56
USP46-205ENST00000504078 CENPJQ9HC77 1338 aaPredicted RBP5.29□□□□□ -1.56
USP46-205ENST00000504078 FAM208AQ9UK61 1670 aaKnown RBP5.29□□□□□ -1.56
USP46-205ENST00000504078 CFHP08603 1231 aa5.29□□□□□ -1.56
USP46-205ENST00000504078 HTRA3P83110 453 aa5.29□□□□□ -1.56
USP46-205ENST00000504078 SMIM5Q71RC9 77 aa5.29□□□□□ -1.56
USP46-205ENST00000504078 SPSB2Q99619 263 aa5.29□□□□□ -1.56
USP46-205ENST00000504078 CARD10Q9BWT7 1032 aa5.29□□□□□ -1.56
USP46-205ENST00000504078 TMEM134Q9H6X4 195 aa5.29□□□□□ -1.56
USP46-205ENST00000504078 GPBP1L1Q9HC44 474 aaPredicted RBP5.29□□□□□ -1.56
USP46-205ENST00000504078 NLRP2Q9NX02 1062 aa5.29□□□□□ -1.56
USP46-205ENST00000504078 TFCP2L1Q9NZI6 479 aa5.29□□□□□ -1.56
USP46-205ENST00000504078 CABP1Q9NZU7 370 aa5.29□□□□□ -1.56
USP46-205ENST00000504078 NSD2O96028 1365 aa5.29□□□□□ -1.56
USP46-205ENST00000504078 CCDC7Q96M83 1385 aa5.29□□□□□ -1.56
USP46-205ENST00000504078 WDR90Q96KV7 1748 aa5.28□□□□□ -1.56
USP46-205ENST00000504078 TTC21BQ7Z4L5 1316 aa5.28□□□□□ -1.56
USP46-205ENST00000504078 EXOC5O00471 708 aa5.28□□□□□ -1.56
USP46-205ENST00000504078 HSPA6P17066 643 aa5.28□□□□□ -1.56
USP46-205ENST00000504078 ARHGEF25Q86VW2 580 aa5.28□□□□□ -1.56
USP46-205ENST00000504078 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.28□□□□□ -1.56
USP46-205ENST00000504078 SNIP1Q8TAD8 396 aaKnown RBP5.28□□□□□ -1.56
USP46-205ENST00000504078 RBM46Q8TBY0 533 aaKnown RBP5.28□□□□□ -1.56
USP46-205ENST00000504078 DDX54Q8TDD1 881 aaKnown RBP5.28□□□□□ -1.56
USP46-205ENST00000504078 BBXQ8WY36 941 aaPredicted RBP5.28□□□□□ -1.56
USP46-205ENST00000504078 IRF7Q92985 503 aa5.28□□□□□ -1.56
USP46-205ENST00000504078 LTV1Q96GA3 475 aaPredicted RBP5.28□□□□□ -1.56
USP46-205ENST00000504078 NXF1Q9UBU9 619 aaKnown RBP5.28□□□□□ -1.56
USP46-205ENST00000504078 MEGF6O75095 1541 aa5.28□□□□□ -1.56
USP46-205ENST00000504078 USP54Q70EL1 1684 aa5.28□□□□□ -1.56
USP46-205ENST00000504078 SMPD1P17405 629 aa5.27□□□□□ -1.57
USP46-205ENST00000504078 GMPRP36959 345 aa5.27□□□□□ -1.57
USP46-205ENST00000504078 NME9Q86XW9 330 aa5.27□□□□□ -1.57
USP46-205ENST00000504078 WNT7AO00755 349 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms