RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 POTECB2RU33 542 aa18.92■□□□□ 0.62
POLR2J3-207ENST00000503564 NUDCQ9Y266 331 aa18.92■□□□□ 0.62
POLR2J3-207ENST00000503564 KDM3BQ7LBC6 1761 aa18.91■□□□□ 0.62
POLR2J3-207ENST00000503564 U2AF1L5P0DN76 240 aaPredicted RBP18.91■□□□□ 0.62
POLR2J3-207ENST00000503564 U2AF1Q01081 240 aaKnown RBP eCLIP18.91■□□□□ 0.62
POLR2J3-207ENST00000503564 STYK1Q6J9G0 422 aa18.91■□□□□ 0.62
POLR2J3-207ENST00000503564 MCM10Q7L590 875 aa18.91■□□□□ 0.62
POLR2J3-207ENST00000503564 NPM2Q86SE8 214 aaKnown RBP18.91■□□□□ 0.62
POLR2J3-207ENST00000503564 ZNF219Q9P2Y4 722 aaPredicted RBP18.91■□□□□ 0.62
POLR2J3-207ENST00000503564 SRGNP10124 158 aa18.9■□□□□ 0.62
POLR2J3-207ENST00000503564 ST5P78524 1137 aa18.9■□□□□ 0.62
POLR2J3-207ENST00000503564 CNKSR1Q969H4 720 aa18.9■□□□□ 0.62
POLR2J3-207ENST00000503564 SNRPA1P09661 255 aaKnown RBP18.89■□□□□ 0.61
POLR2J3-207ENST00000503564 ERFEQ4G0M1 354 aa18.89■□□□□ 0.61
POLR2J3-207ENST00000503564 PRPF40BQ6NWY9 871 aaKnown RBP18.89■□□□□ 0.61
POLR2J3-207ENST00000503564 CLEC4GQ6UXB4 293 aa18.89■□□□□ 0.61
POLR2J3-207ENST00000503564 TAOK3Q9H2K8 898 aa18.89■□□□□ 0.61
POLR2J3-207ENST00000503564 NBPF26B4DH59 902 aa18.88■□□□□ 0.61
POLR2J3-207ENST00000503564 DCTN1Q14203 1278 aa18.88■□□□□ 0.61
POLR2J3-207ENST00000503564 NBPF10Q6P3W6 841 aaKnown RBP18.88■□□□□ 0.61
POLR2J3-207ENST00000503564 NBPF15Q8N660 670 aa18.88■□□□□ 0.61
POLR2J3-207ENST00000503564 RTF1Q92541 710 aaKnown RBP18.88■□□□□ 0.61
POLR2J3-207ENST00000503564 MASTLQ96GX5 879 aa18.88■□□□□ 0.61
POLR2J3-207ENST00000503564 RGL2O15211 777 aa18.87■□□□□ 0.61
POLR2J3-207ENST00000503564 HTATSF1O43719 755 aaKnown RBP18.87■□□□□ 0.61
POLR2J3-207ENST00000503564 NPHP1O15259 732 aa18.86■□□□□ 0.61
POLR2J3-207ENST00000503564 DPY19L2Q6NUT2 758 aa18.86■□□□□ 0.61
POLR2J3-207ENST00000503564 NBPF5PQ86XG9 351 aaPredicted RBP18.86■□□□□ 0.61
POLR2J3-207ENST00000503564 ZNF652Q9Y2D9 606 aa18.86■□□□□ 0.61
POLR2J3-207ENST00000503564 KLRG2A4D1S0 409 aaPredicted RBP18.85■□□□□ 0.61
POLR2J3-207ENST00000503564 SOGA3Q5TF21 947 aa18.85■□□□□ 0.61
POLR2J3-207ENST00000503564 C7orf43Q8WVR3 580 aa18.85■□□□□ 0.61
POLR2J3-207ENST00000503564 SCN4AP35499 1836 aa18.84■□□□□ 0.61
POLR2J3-207ENST00000503564 NUP98P52948 1817 aa18.84■□□□□ 0.61
POLR2J3-207ENST00000503564 DDNO94850 711 aaPredicted RBP18.82■□□□□ 0.6
POLR2J3-207ENST00000503564 NPR1P16066 1061 aa18.82■□□□□ 0.6
POLR2J3-207ENST00000503564 TAF7Q15545 349 aaPredicted RBP18.82■□□□□ 0.6
POLR2J3-207ENST00000503564 NIP7Q9Y221 180 aaKnown RBP eCLIP18.82■□□□□ 0.6
POLR2J3-207ENST00000503564 CCDC93Q567U6 631 aa18.81■□□□□ 0.6
POLR2J3-207ENST00000503564 COL13A1Q5TAT6 717 aaPredicted RBP18.81■□□□□ 0.6
POLR2J3-207ENST00000503564 SNED1Q8TER0 1413 aa18.81■□□□□ 0.6
POLR2J3-207ENST00000503564 POTEIP0CG38 1075 aa18.8■□□□□ 0.6
POLR2J3-207ENST00000503564 POTEJP0CG39 1038 aa18.8■□□□□ 0.6
POLR2J3-207ENST00000503564 HLFQ16534 295 aa18.8■□□□□ 0.6
POLR2J3-207ENST00000503564 TPTE2Q6XPS3 522 aa18.8■□□□□ 0.6
POLR2J3-207ENST00000503564 MIS18AQ9NYP9 233 aa18.8■□□□□ 0.6
POLR2J3-207ENST00000503564 ADAMTSL1Q8N6G6 1762 aa18.8■□□□□ 0.6
POLR2J3-207ENST00000503564 ABCC12Q96J65 1359 aa18.8■□□□□ 0.6
POLR2J3-207ENST00000503564 CHADLQ6NUI6 762 aa18.79■□□□□ 0.6
POLR2J3-207ENST00000503564 L3MBTL3Q96JM7 780 aaPredicted RBP18.79■□□□□ 0.6
POLR2J3-207ENST00000503564 FKBP4Q02790 459 aaKnown RBP eCLIP18.78■□□□□ 0.6
POLR2J3-207ENST00000503564 OLFM4Q6UX06 510 aa18.78■□□□□ 0.6
POLR2J3-207ENST00000503564 PLEKHF1Q96S99 279 aa18.78■□□□□ 0.6
POLR2J3-207ENST00000503564 FAM177BA6PVY3 158 aa18.77■□□□□ 0.6
POLR2J3-207ENST00000503564 ZNF541Q9H0D2 1346 aa18.76■□□□□ 0.59
POLR2J3-207ENST00000503564 PCNTO95613 3336 aa18.76■□□□□ 0.59
POLR2J3-207ENST00000503564 RIC1Q4ADV7 1423 aa18.76■□□□□ 0.59
POLR2J3-207ENST00000503564 HSPA1AP0DMV8 641 aaKnown RBP18.76■□□□□ 0.59
POLR2J3-207ENST00000503564 HSPA1BP0DMV9 641 aaKnown RBP18.76■□□□□ 0.59
POLR2J3-207ENST00000503564 PNISRQ8TF01 805 aaKnown RBP18.76■□□□□ 0.59
POLR2J3-207ENST00000503564 ZNF277Q9NRM2 450 aaPredicted RBP18.76■□□□□ 0.59
POLR2J3-207ENST00000503564 IBTKQ9P2D0 1353 aaPredicted RBP18.76■□□□□ 0.59
POLR2J3-207ENST00000503564 IQCA1LA6NCM1 817 aa18.75■□□□□ 0.59
POLR2J3-207ENST00000503564 ERVV-1B6SEH8 477 aa18.75■□□□□ 0.59
POLR2J3-207ENST00000503564 EIF4A1P60842 406 aaKnown RBP18.75■□□□□ 0.59
POLR2J3-207ENST00000503564 CRY2Q49AN0 593 aa18.75■□□□□ 0.59
POLR2J3-207ENST00000503564 THUMPD2Q9BTF0 503 aaKnown RBP18.75■□□□□ 0.59
POLR2J3-207ENST00000503564 TAF1DQ9H5J8 278 aaPredicted RBP18.75■□□□□ 0.59
POLR2J3-207ENST00000503564 CREBZFQ9NS37 354 aa18.75■□□□□ 0.59
POLR2J3-207ENST00000503564 MAP3K15Q6ZN16 1313 aa18.74■□□□□ 0.59
POLR2J3-207ENST00000503564 PASKQ96RG2 1323 aa18.74■□□□□ 0.59
POLR2J3-207ENST00000503564 COL4A5P29400 1685 aa18.74■□□□□ 0.59
POLR2J3-207ENST00000503564 NFE2L2Q16236 605 aa18.74■□□□□ 0.59
POLR2J3-207ENST00000503564 RTKN2Q8IZC4 609 aa18.74■□□□□ 0.59
POLR2J3-207ENST00000503564 UBN2Q6ZU65 1347 aa18.74■□□□□ 0.59
POLR2J3-207ENST00000503564 ALDH1B1P30837 517 aa18.73■□□□□ 0.59
POLR2J3-207ENST00000503564 TTLL7Q6ZT98 887 aa18.73■□□□□ 0.59
POLR2J3-207ENST00000503564 LDHDQ86WU2 507 aa18.73■□□□□ 0.59
POLR2J3-207ENST00000503564 NUTM1Q86Y26 1132 aa18.73■□□□□ 0.59
POLR2J3-207ENST00000503564 NEFMP07197 916 aa18.72■□□□□ 0.59
POLR2J3-207ENST00000503564 IARSP41252 1262 aaKnown RBP18.72■□□□□ 0.59
POLR2J3-207ENST00000503564 NGEFQ8N5V2 710 aa18.72■□□□□ 0.59
POLR2J3-207ENST00000503564 NYXQ9GZU5 481 aa18.72■□□□□ 0.59
POLR2J3-207ENST00000503564 FZD9O00144 591 aa18.71■□□□□ 0.59
POLR2J3-207ENST00000503564 GTF2E1P29083 439 aaPredicted RBP18.71■□□□□ 0.59
POLR2J3-207ENST00000503564 KIF6Q6ZMV9 814 aa18.71■□□□□ 0.59
POLR2J3-207ENST00000503564 LTBP1Q14766 1721 aa18.71■□□□□ 0.59
POLR2J3-207ENST00000503564 ANKRD36CQ5JPF3 1778 aa18.7■□□□□ 0.58
POLR2J3-207ENST00000503564 CNTNAP1P78357 1384 aa18.7■□□□□ 0.58
POLR2J3-207ENST00000503564 TNS4Q8IZW8 715 aa18.7■□□□□ 0.58
POLR2J3-207ENST00000503564 SYNE4Q8N205 404 aa18.7■□□□□ 0.58
POLR2J3-207ENST00000503564 PSMD1Q99460 953 aa18.7■□□□□ 0.58
POLR2J3-207ENST00000503564 MKRN1Q9UHC7 482 aaKnown RBP18.7■□□□□ 0.58
POLR2J3-207ENST00000503564 RRP7AQ9Y3A4 280 aaKnown RBP18.7■□□□□ 0.58
POLR2J3-207ENST00000503564 ERBB4Q15303 1308 aa18.7■□□□□ 0.58
POLR2J3-207ENST00000503564 ITGBL1O95965 494 aaPredicted RBP18.69■□□□□ 0.58
POLR2J3-207ENST00000503564 MYL6BP14649 208 aa18.69■□□□□ 0.58
POLR2J3-207ENST00000503564 HOXA10P31260 410 aaPredicted RBP18.69■□□□□ 0.58
POLR2J3-207ENST00000503564 LRP10Q7Z4F1 713 aa18.69■□□□□ 0.58
POLR2J3-207ENST00000503564 ZNF34Q8IZ26 560 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms