RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 ITGB4P16144 1822 aa23.54■■□□□ 1.36
ARHGEF28-205ENST00000503341 UBAP1LF5GYI3 381 aa23.53■■□□□ 1.36
ARHGEF28-205ENST00000503341 SDSP20132 328 aa23.53■■□□□ 1.36
ARHGEF28-205ENST00000503341 ATG3Q9NT62 314 aa23.53■■□□□ 1.36
ARHGEF28-205ENST00000503341 DAXXQ9UER7 740 aaPredicted RBP23.53■■□□□ 1.36
ARHGEF28-205ENST00000503341 ARFGEF2Q9Y6D5 1785 aa23.53■■□□□ 1.36
ARHGEF28-205ENST00000503341 HSP90AB4PQ58FF6 505 aa23.53■■□□□ 1.36
ARHGEF28-205ENST00000503341 VSIG10Q8N0Z9 540 aa23.53■■□□□ 1.36
ARHGEF28-205ENST00000503341 RHPN1Q8TCX5 695 aa23.53■■□□□ 1.36
ARHGEF28-205ENST00000503341 MX1P20591 662 aa23.52■■□□□ 1.36
ARHGEF28-205ENST00000503341 STAP2Q9UGK3 403 aa23.52■■□□□ 1.36
ARHGEF28-205ENST00000503341 BCL9O00512 1426 aa23.52■■□□□ 1.35
ARHGEF28-205ENST00000503341 KIF1BPQ96EK5 621 aa23.51■■□□□ 1.35
ARHGEF28-205ENST00000503341 SLIT2O94813 1529 aa23.51■■□□□ 1.35
ARHGEF28-205ENST00000503341 BICC1Q9H694 974 aaKnown RBP23.51■■□□□ 1.35
ARHGEF28-205ENST00000503341 IL1RAPL2Q9NP60 686 aa23.51■■□□□ 1.35
ARHGEF28-205ENST00000503341 RBM25P49756 843 aaKnown RBP23.5■■□□□ 1.35
ARHGEF28-205ENST00000503341 TTLL7Q6ZT98 887 aa23.5■■□□□ 1.35
ARHGEF28-205ENST00000503341 TEX13AQ9BXU3 409 aaPredicted RBP23.5■■□□□ 1.35
ARHGEF28-205ENST00000503341 NWD2Q9ULI1 1742 aa23.49■■□□□ 1.35
ARHGEF28-205ENST00000503341 SPATA31A5Q5VU36 1347 aa23.49■■□□□ 1.35
ARHGEF28-205ENST00000503341 SPATA31A7Q8IWB4 1347 aa23.49■■□□□ 1.35
ARHGEF28-205ENST00000503341 ATP5J2-PTCD1G3V325 749 aa23.47■■□□□ 1.35
ARHGEF28-205ENST00000503341 EIF5BO60841 1220 aaKnown RBP23.47■■□□□ 1.35
ARHGEF28-205ENST00000503341 DNAJC10Q8IXB1 793 aa23.47■■□□□ 1.35
ARHGEF28-205ENST00000503341 AFDNP55196 1824 aaKnown RBP23.47■■□□□ 1.35
ARHGEF28-205ENST00000503341 AOX1Q06278 1338 aa23.47■■□□□ 1.35
ARHGEF28-205ENST00000503341 BECN1Q14457 450 aa23.47■■□□□ 1.35
ARHGEF28-205ENST00000503341 DDB1Q16531 1140 aa23.47■■□□□ 1.35
ARHGEF28-205ENST00000503341 TSHZ3Q63HK5 1081 aa23.47■■□□□ 1.35
ARHGEF28-205ENST00000503341 RBM42Q9BTD8 480 aaKnown RBP23.46■■□□□ 1.35
ARHGEF28-205ENST00000503341 NUP188Q5SRE5 1749 aa23.46■■□□□ 1.35
ARHGEF28-205ENST00000503341 COL15A1P39059 1388 aa23.46■■□□□ 1.35
ARHGEF28-205ENST00000503341 EPHA10Q5JZY3 1008 aa23.45■■□□□ 1.35
ARHGEF28-205ENST00000503341 BARGINQ6ZT62 677 aa23.45■■□□□ 1.35
ARHGEF28-205ENST00000503341 NUTM1Q86Y26 1132 aa23.45■■□□□ 1.35
ARHGEF28-205ENST00000503341 PA2G4Q9UQ80 394 aaKnown RBP23.45■■□□□ 1.35
ARHGEF28-205ENST00000503341 OS9Q13438 667 aaPredicted RBP23.45■■□□□ 1.34
ARHGEF28-205ENST00000503341 TUBGCP6Q96RT7 1819 aa23.45■■□□□ 1.34
ARHGEF28-205ENST00000503341 A0A087WZG4 1122 aa23.44■■□□□ 1.34
ARHGEF28-205ENST00000503341 PRIM1P49642 420 aaKnown RBP23.44■■□□□ 1.34
ARHGEF28-205ENST00000503341 STARD3NLO95772 234 aa23.43■■□□□ 1.34
ARHGEF28-205ENST00000503341 CASP7P55210 303 aa23.43■■□□□ 1.34
ARHGEF28-205ENST00000503341 CASC1Q6TDU7 716 aa23.43■■□□□ 1.34
ARHGEF28-205ENST00000503341 UBE3BQ7Z3V4 1068 aa23.43■■□□□ 1.34
ARHGEF28-205ENST00000503341 ERC1Q8IUD2 1116 aa23.43■■□□□ 1.34
ARHGEF28-205ENST00000503341 SYTL4Q96C24 671 aaPredicted RBP23.43■■□□□ 1.34
ARHGEF28-205ENST00000503341 JARID2Q92833 1246 aaPredicted RBP23.43■■□□□ 1.34
ARHGEF28-205ENST00000503341 CCDC9Q9Y3X0 531 aaKnown RBP23.43■■□□□ 1.34
ARHGEF28-205ENST00000503341 JCADQ9P266 1359 aa23.42■■□□□ 1.34
ARHGEF28-205ENST00000503341 DOT1LQ8TEK3 1739 aa23.42■■□□□ 1.34
ARHGEF28-205ENST00000503341 SLC4A9Q96Q91 983 aa23.42■■□□□ 1.34
ARHGEF28-205ENST00000503341 ZBTB3Q9H5J0 574 aa23.42■■□□□ 1.34
ARHGEF28-205ENST00000503341 H7C1W4 665 aa23.41■■□□□ 1.34
ARHGEF28-205ENST00000503341 UNC5CLQ8IV45 518 aa23.41■■□□□ 1.34
ARHGEF28-205ENST00000503341 RABL6Q3YEC7 729 aaPredicted RBP23.41■■□□□ 1.34
ARHGEF28-205ENST00000503341 MARCH10Q8NA82 808 aaPredicted RBP23.41■■□□□ 1.34
ARHGEF28-205ENST00000503341 TBC1D2Q9BYX2 928 aa23.41■■□□□ 1.34
ARHGEF28-205ENST00000503341 CLASRPQ8N2M8 674 aaKnown RBP23.4■■□□□ 1.34
ARHGEF28-205ENST00000503341 CWC25Q9NXE8 425 aaPredicted RBP23.4■■□□□ 1.34
ARHGEF28-205ENST00000503341 G3BP1Q13283 466 aaKnown RBP eCLIP23.39■■□□□ 1.34
ARHGEF28-205ENST00000503341 PI4K2BQ8TCG2 481 aa23.39■■□□□ 1.34
ARHGEF28-205ENST00000503341 USP42Q9H9J4 1324 aaKnown RBP23.39■■□□□ 1.33
ARHGEF28-205ENST00000503341 CYP19A1P11511 503 aaPredicted RBP23.39■■□□□ 1.33
ARHGEF28-205ENST00000503341 CCDC191Q8NCU4 936 aa23.39■■□□□ 1.33
ARHGEF28-205ENST00000503341 SASH1O94885 1247 aa23.38■■□□□ 1.33
ARHGEF28-205ENST00000503341 KIF2CQ99661 725 aa23.38■■□□□ 1.33
ARHGEF28-205ENST00000503341 TRIM6-TRIM34B2RNG4 842 aa23.37■■□□□ 1.33
ARHGEF28-205ENST00000503341 RFX5P48382 616 aaPredicted RBP23.37■■□□□ 1.33
ARHGEF28-205ENST00000503341 KAT6BQ8WYB5 2073 aa23.37■■□□□ 1.33
ARHGEF28-205ENST00000503341 RILPL2Q969X0 211 aa23.37■■□□□ 1.33
ARHGEF28-205ENST00000503341 NGLY1Q96IV0 654 aa23.37■■□□□ 1.33
ARHGEF28-205ENST00000503341 ISCA1Q9BUE6 129 aa23.37■■□□□ 1.33
ARHGEF28-205ENST00000503341 USP26Q9BXU7 913 aa23.37■■□□□ 1.33
ARHGEF28-205ENST00000503341 COPRSQ9NQ92 184 aa23.37■■□□□ 1.33
ARHGEF28-205ENST00000503341 TTC41PQ6P2S7 1318 aa23.37■■□□□ 1.33
ARHGEF28-205ENST00000503341 BCL9LQ86UU0 1499 aa23.36■■□□□ 1.33
ARHGEF28-205ENST00000503341 TCIRG1Q13488 830 aa23.36■■□□□ 1.33
ARHGEF28-205ENST00000503341 KLHDC4Q8TBB5 520 aa23.36■■□□□ 1.33
ARHGEF28-205ENST00000503341 C8orf37Q96NL8 207 aa23.36■■□□□ 1.33
ARHGEF28-205ENST00000503341 ZNF330Q9Y3S2 320 aaPredicted RBP23.36■■□□□ 1.33
ARHGEF28-205ENST00000503341 TJP1Q07157 1748 aa23.36■■□□□ 1.33
ARHGEF28-205ENST00000503341 ERC2O15083 957 aa23.35■■□□□ 1.33
ARHGEF28-205ENST00000503341 VPS72Q15906 364 aa23.35■■□□□ 1.33
ARHGEF28-205ENST00000503341 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.35■■□□□ 1.33
ARHGEF28-205ENST00000503341 FOXO4P98177 505 aa23.35■■□□□ 1.33
ARHGEF28-205ENST00000503341 KIF6Q6ZMV9 814 aa23.35■■□□□ 1.33
ARHGEF28-205ENST00000503341 PTPN12Q05209 780 aaKnown RBP23.34■■□□□ 1.33
ARHGEF28-205ENST00000503341 ACSBG1Q96GR2 724 aa23.34■■□□□ 1.33
ARHGEF28-205ENST00000503341 SIL1Q9H173 461 aa23.34■■□□□ 1.33
ARHGEF28-205ENST00000503341 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.34■■□□□ 1.33
ARHGEF28-205ENST00000503341 REC8O95072 547 aa23.33■■□□□ 1.33
ARHGEF28-205ENST00000503341 CHMLP26374 656 aa23.33■■□□□ 1.33
ARHGEF28-205ENST00000503341 TRIM28Q13263 835 aaKnown RBP23.33■■□□□ 1.33
ARHGEF28-205ENST00000503341 IFIT2P09913 472 aaKnown RBP23.33■■□□□ 1.32
ARHGEF28-205ENST00000503341 LMBR1LQ6UX01 489 aa23.33■■□□□ 1.32
ARHGEF28-205ENST00000503341 AACSQ86V21 672 aa23.33■■□□□ 1.32
ARHGEF28-205ENST00000503341 FNBP4Q8N3X1 1017 aaPredicted RBP23.33■■□□□ 1.32
ARHGEF28-205ENST00000503341 MAP3K15Q6ZN16 1313 aa23.33■■□□□ 1.32
ARHGEF28-205ENST00000503341 SNX21Q969T3 373 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms