RNA–Protein interactions for RNA: ENST00000503324.1

SMAD1-204, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-204ENST00000503324 E9PSI1 815 aa22.91■■□□□ 1.26
SMAD1-204ENST00000503324 HLFQ16534 295 aa22.91■■□□□ 1.26
SMAD1-204ENST00000503324 CLEC4GQ6UXB4 293 aa22.91■■□□□ 1.26
SMAD1-204ENST00000503324 CDCA7LQ96GN5 454 aa22.91■■□□□ 1.26
SMAD1-204ENST00000503324 SYT17Q9BSW7 474 aa22.91■■□□□ 1.26
SMAD1-204ENST00000503324 PARP3Q9Y6F1 533 aa22.91■■□□□ 1.26
SMAD1-204ENST00000503324 ERVV-1B6SEH8 477 aa22.9■■□□□ 1.26
SMAD1-204ENST00000503324 COPS6Q7L5N1 327 aa22.9■■□□□ 1.26
SMAD1-204ENST00000503324 XAGE3Q8WTP9 111 aa22.9■■□□□ 1.26
SMAD1-204ENST00000503324 VAMP4O75379 141 aa22.89■■□□□ 1.25
SMAD1-204ENST00000503324 HNRNPUQ00839 825 aaKnown RBP eCLIP22.89■■□□□ 1.25
SMAD1-204ENST00000503324 CCDC30Q5VVM6 783 aa22.89■■□□□ 1.25
SMAD1-204ENST00000503324 KIF6Q6ZMV9 814 aa22.89■■□□□ 1.25
SMAD1-204ENST00000503324 BICDL1Q6ZP65 573 aa22.89■■□□□ 1.25
SMAD1-204ENST00000503324 ZNF652Q9Y2D9 606 aa22.89■■□□□ 1.25
SMAD1-204ENST00000503324 NRXN2Q9P2S2 1712 aa22.88■■□□□ 1.25
SMAD1-204ENST00000503324 TRMT2AQ8IZ69 625 aaKnown RBP22.88■■□□□ 1.25
SMAD1-204ENST00000503324 ZBTB3Q9H5J0 574 aa22.88■■□□□ 1.25
SMAD1-204ENST00000503324 HYPKQ9NX55 129 aa22.88■■□□□ 1.25
SMAD1-204ENST00000503324 CD2APQ9Y5K6 639 aa22.88■■□□□ 1.25
SMAD1-204ENST00000503324 C10orf71Q711Q0 1435 aa22.88■■□□□ 1.25
SMAD1-204ENST00000503324 AIMP1Q12904 312 aaKnown RBP22.87■■□□□ 1.25
SMAD1-204ENST00000503324 KLHL34Q8N239 644 aa22.87■■□□□ 1.25
SMAD1-204ENST00000503324 CHMP4AQ9BY43 222 aa22.87■■□□□ 1.25
SMAD1-204ENST00000503324 AFDNP55196 1824 aaKnown RBP22.87■■□□□ 1.25
SMAD1-204ENST00000503324 KIF13BQ9NQT8 1826 aa22.87■■□□□ 1.25
SMAD1-204ENST00000503324 ATP10DQ9P241 1426 aa22.86■■□□□ 1.25
SMAD1-204ENST00000503324 SERPINB2P05120 415 aa22.86■■□□□ 1.25
SMAD1-204ENST00000503324 NLGN2Q8NFZ4 835 aa22.86■■□□□ 1.25
SMAD1-204ENST00000503324 PHAXQ9H814 394 aaKnown RBP22.86■■□□□ 1.25
SMAD1-204ENST00000503324 NUP98P52948 1817 aa22.86■■□□□ 1.25
SMAD1-204ENST00000503324 CARMIL3Q8ND23 1372 aa22.86■■□□□ 1.25
SMAD1-204ENST00000503324 TCERG1O14776 1098 aaKnown RBP22.85■■□□□ 1.25
SMAD1-204ENST00000503324 GIGYF2Q6Y7W6 1299 aaKnown RBP22.85■■□□□ 1.25
SMAD1-204ENST00000503324 SETDB2Q96T68 719 aa22.84■■□□□ 1.25
SMAD1-204ENST00000503324 NIP7Q9Y221 180 aaKnown RBP eCLIP22.83■■□□□ 1.25
SMAD1-204ENST00000503324 PLBD2Q8NHP8 589 aa22.82■■□□□ 1.24
SMAD1-204ENST00000503324 STK31Q9BXU1 1019 aa22.82■■□□□ 1.24
SMAD1-204ENST00000503324 KIAA1551Q9HCM1 1747 aa22.82■■□□□ 1.24
SMAD1-204ENST00000503324 ANKRD13DQ6ZTN6 518 aa22.81■■□□□ 1.24
SMAD1-204ENST00000503324 ZNF34Q8IZ26 560 aa22.81■■□□□ 1.24
SMAD1-204ENST00000503324 UBN2Q6ZU65 1347 aa22.81■■□□□ 1.24
SMAD1-204ENST00000503324 PRR5LQ6MZQ0 368 aa22.8■■□□□ 1.24
SMAD1-204ENST00000503324 ZBED9Q6R2W3 1325 aa22.8■■□□□ 1.24
SMAD1-204ENST00000503324 PXDNLA1KZ92 1463 aa22.79■■□□□ 1.24
SMAD1-204ENST00000503324 SLC4A2P04920 1241 aa22.79■■□□□ 1.24
SMAD1-204ENST00000503324 GPTP24298 496 aa22.79■■□□□ 1.24
SMAD1-204ENST00000503324 G2E3Q7L622 706 aa22.79■■□□□ 1.24
SMAD1-204ENST00000503324 TCIRG1Q13488 830 aa22.78■■□□□ 1.24
SMAD1-204ENST00000503324 ANKRD36CQ5JPF3 1778 aa22.78■■□□□ 1.24
SMAD1-204ENST00000503324 ARFGEF2Q9Y6D5 1785 aa22.78■■□□□ 1.24
SMAD1-204ENST00000503324 TGFB2P61812 414 aa22.77■■□□□ 1.24
SMAD1-204ENST00000503324 NBPF5PQ86XG9 351 aaPredicted RBP22.77■■□□□ 1.24
SMAD1-204ENST00000503324 CNBD1Q8NA66 436 aa22.77■■□□□ 1.24
SMAD1-204ENST00000503324 HSP90AB3PQ58FF7 597 aa22.76■■□□□ 1.23
SMAD1-204ENST00000503324 CCDC24Q8N4L8 307 aa22.76■■□□□ 1.23
SMAD1-204ENST00000503324 IBTKQ9P2D0 1353 aaPredicted RBP22.76■■□□□ 1.23
SMAD1-204ENST00000503324 ANKRD31Q8N7Z5 1873 aa22.75■■□□□ 1.23
SMAD1-204ENST00000503324 FAM177BA6PVY3 158 aa22.75■■□□□ 1.23
SMAD1-204ENST00000503324 FLIIQ13045 1269 aa22.75■■□□□ 1.23
SMAD1-204ENST00000503324 SUSD4Q5VX71 490 aa22.75■■□□□ 1.23
SMAD1-204ENST00000503324 CACNA1FO60840 1977 aa22.75■■□□□ 1.23
SMAD1-204ENST00000503324 N4BP2Q86UW6 1770 aaPredicted RBP22.75■■□□□ 1.23
SMAD1-204ENST00000503324 ADCY9O60503 1353 aa22.75■■□□□ 1.23
SMAD1-204ENST00000503324 DPEP1P16444 411 aa22.74■■□□□ 1.23
SMAD1-204ENST00000503324 PARP10Q53GL7 1025 aa22.74■■□□□ 1.23
SMAD1-204ENST00000503324 RIC3Q7Z5B4 369 aa22.74■■□□□ 1.23
SMAD1-204ENST00000503324 ISCA1Q9BUE6 129 aa22.74■■□□□ 1.23
SMAD1-204ENST00000503324 A0A0G2JLW4 131 aa22.73■■□□□ 1.23
SMAD1-204ENST00000503324 NTSR2O95665 410 aa22.73■■□□□ 1.23
SMAD1-204ENST00000503324 DDX58O95786 925 aaKnown RBP22.73■■□□□ 1.23
SMAD1-204ENST00000503324 KCNA3P22001 575 aa22.73■■□□□ 1.23
SMAD1-204ENST00000503324 KSR2Q6VAB6 950 aa22.73■■□□□ 1.23
SMAD1-204ENST00000503324 TPTE2Q6XPS3 522 aa22.73■■□□□ 1.23
SMAD1-204ENST00000503324 NLRP10Q86W26 655 aa22.73■■□□□ 1.23
SMAD1-204ENST00000503324 BRIP1Q9BX63 1249 aa22.73■■□□□ 1.23
SMAD1-204ENST00000503324 PI4KAP2A4QPH2 592 aa22.72■■□□□ 1.23
SMAD1-204ENST00000503324 CHRNA5P30532 468 aa22.72■■□□□ 1.23
SMAD1-204ENST00000503324 ST5P78524 1137 aa22.72■■□□□ 1.23
SMAD1-204ENST00000503324 PI4KAP1Q8N8J0 262 aa22.72■■□□□ 1.23
SMAD1-204ENST00000503324 ZNF428Q96B54 188 aa22.72■■□□□ 1.23
SMAD1-204ENST00000503324 MAP3K2Q9Y2U5 619 aa22.72■■□□□ 1.23
SMAD1-204ENST00000503324 ABCC12Q96J65 1359 aa22.72■■□□□ 1.23
SMAD1-204ENST00000503324 ATP5J2-PTCD1G3V325 749 aa22.71■■□□□ 1.23
SMAD1-204ENST00000503324 CT47B1P0C2W7 299 aaPredicted RBP22.71■■□□□ 1.23
SMAD1-204ENST00000503324 NUTM1Q86Y26 1132 aa22.71■■□□□ 1.23
SMAD1-204ENST00000503324 METTL22Q9BUU2 404 aaPredicted RBP22.71■■□□□ 1.23
SMAD1-204ENST00000503324 NYXQ9GZU5 481 aa22.71■■□□□ 1.23
SMAD1-204ENST00000503324 NPHP1O15259 732 aa22.7■■□□□ 1.22
SMAD1-204ENST00000503324 TRIM28Q13263 835 aaKnown RBP22.7■■□□□ 1.22
SMAD1-204ENST00000503324 ERFEQ4G0M1 354 aa22.7■■□□□ 1.22
SMAD1-204ENST00000503324 PPP1R42Q7Z4L9 355 aa22.7■■□□□ 1.22
SMAD1-204ENST00000503324 MRPL50Q8N5N7 158 aaKnown RBP22.7■■□□□ 1.22
SMAD1-204ENST00000503324 SSH1Q8WYL5 1049 aa22.7■■□□□ 1.22
SMAD1-204ENST00000503324 MYD88Q99836 296 aa22.7■■□□□ 1.22
SMAD1-204ENST00000503324 BRCA1P38398 1863 aaKnown RBP22.69■■□□□ 1.22
SMAD1-204ENST00000503324 FKBP5Q13451 457 aaPredicted RBP22.69■■□□□ 1.22
SMAD1-204ENST00000503324 UTP14AQ9BVJ6 771 aaKnown RBP22.69■■□□□ 1.22
SMAD1-204ENST00000503324 COL11A2P13942 1736 aaPredicted RBP22.68■■□□□ 1.22
SMAD1-204ENST00000503324 RIC1Q4ADV7 1423 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms