RNA–Protein interactions for RNA: ENST00000502955.5

DDR1-247, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-247ENST00000502955 CCDC24Q8N4L8 307 aa18.44■□□□□ 0.54
DDR1-247ENST00000502955 MASTLQ96GX5 879 aa18.44■□□□□ 0.54
DDR1-247ENST00000502955 ZNF219Q9P2Y4 722 aaPredicted RBP18.44■□□□□ 0.54
DDR1-247ENST00000502955 CACNA1SQ13698 1873 aa18.43■□□□□ 0.54
DDR1-247ENST00000502955 RGL2O15211 777 aa18.43■□□□□ 0.54
DDR1-247ENST00000502955 HSPA1AP0DMV8 641 aaKnown RBP18.43■□□□□ 0.54
DDR1-247ENST00000502955 HSPA1BP0DMV9 641 aaKnown RBP18.43■□□□□ 0.54
DDR1-247ENST00000502955 DZIP3Q86Y13 1208 aaKnown RBP18.43■□□□□ 0.54
DDR1-247ENST00000502955 PHACTR3Q96KR7 559 aa18.43■□□□□ 0.54
DDR1-247ENST00000502955 RSPH6AQ9H0K4 717 aa18.43■□□□□ 0.54
DDR1-247ENST00000502955 KCNQ3O43525 872 aa18.42■□□□□ 0.54
DDR1-247ENST00000502955 CHADLQ6NUI6 762 aa18.42■□□□□ 0.54
DDR1-247ENST00000502955 C7orf43Q8WVR3 580 aa18.42■□□□□ 0.54
DDR1-247ENST00000502955 CREBZFQ9NS37 354 aa18.42■□□□□ 0.54
DDR1-247ENST00000502955 USP16Q9Y5T5 823 aa18.42■□□□□ 0.54
DDR1-247ENST00000502955 KLRG2A4D1S0 409 aaPredicted RBP18.41■□□□□ 0.54
DDR1-247ENST00000502955 NPHP1O15259 732 aa18.41■□□□□ 0.54
DDR1-247ENST00000502955 PRKAR2BP31323 418 aa18.41■□□□□ 0.54
DDR1-247ENST00000502955 SCN4AP35499 1836 aa18.41■□□□□ 0.54
DDR1-247ENST00000502955 DDNO94850 711 aaPredicted RBP18.4■□□□□ 0.54
DDR1-247ENST00000502955 L3MBTL3Q96JM7 780 aaPredicted RBP18.4■□□□□ 0.54
DDR1-247ENST00000502955 ZNF652Q9Y2D9 606 aa18.4■□□□□ 0.54
DDR1-247ENST00000502955 IQCA1LA6NCM1 817 aa18.39■□□□□ 0.53
DDR1-247ENST00000502955 SNRPA1P09661 255 aaKnown RBP18.39■□□□□ 0.53
DDR1-247ENST00000502955 NBPF5PQ86XG9 351 aaPredicted RBP18.39■□□□□ 0.53
DDR1-247ENST00000502955 POTEIP0CG38 1075 aa18.38■□□□□ 0.53
DDR1-247ENST00000502955 POTEJP0CG39 1038 aa18.38■□□□□ 0.53
DDR1-247ENST00000502955 NPR1P16066 1061 aa18.38■□□□□ 0.53
DDR1-247ENST00000502955 CFAP53Q96M91 514 aa18.38■□□□□ 0.53
DDR1-247ENST00000502955 PRAMEF22A3QJZ6 481 aa18.37■□□□□ 0.53
DDR1-247ENST00000502955 CCDC93Q567U6 631 aa18.37■□□□□ 0.53
DDR1-247ENST00000502955 PASKQ96RG2 1323 aa18.37■□□□□ 0.53
DDR1-247ENST00000502955 PIP4K2AP48426 406 aaPredicted RBP18.36■□□□□ 0.53
DDR1-247ENST00000502955 TPTE2Q6XPS3 522 aa18.36■□□□□ 0.53
DDR1-247ENST00000502955 LDHDQ86WU2 507 aa18.36■□□□□ 0.53
DDR1-247ENST00000502955 RTF1Q92541 710 aaKnown RBP18.36■□□□□ 0.53
DDR1-247ENST00000502955 NUDCQ9Y266 331 aa18.36■□□□□ 0.53
DDR1-247ENST00000502955 HTATSF1O43719 755 aaKnown RBP18.35■□□□□ 0.53
DDR1-247ENST00000502955 FKBP4Q02790 459 aaKnown RBP eCLIP18.35■□□□□ 0.53
DDR1-247ENST00000502955 TAF1DQ9H5J8 278 aaPredicted RBP18.35■□□□□ 0.53
DDR1-247ENST00000502955 CNTNAP1P78357 1384 aa18.34■□□□□ 0.53
DDR1-247ENST00000502955 NBPF26B4DH59 902 aa18.34■□□□□ 0.53
DDR1-247ENST00000502955 CAPN15O75808 1086 aa18.34■□□□□ 0.53
DDR1-247ENST00000502955 NBPF10Q6P3W6 841 aaKnown RBP18.34■□□□□ 0.53
DDR1-247ENST00000502955 MCM10Q7L590 875 aa18.34■□□□□ 0.53
DDR1-247ENST00000502955 NBPF15Q8N660 670 aa18.34■□□□□ 0.53
DDR1-247ENST00000502955 NIP7Q9Y221 180 aaKnown RBP eCLIP18.34■□□□□ 0.53
DDR1-247ENST00000502955 ADAMTSL1Q8N6G6 1762 aa18.33■□□□□ 0.53
DDR1-247ENST00000502955 CNGB1Q14028 1251 aaPredicted RBP18.33■□□□□ 0.52
DDR1-247ENST00000502955 RTKN2Q8IZC4 609 aa18.33■□□□□ 0.52
DDR1-247ENST00000502955 MKRN1Q9UHC7 482 aaKnown RBP18.33■□□□□ 0.52
DDR1-247ENST00000502955 LAMB4A4D0S4 1761 aa18.32■□□□□ 0.52
DDR1-247ENST00000502955 SNED1Q8TER0 1413 aa18.32■□□□□ 0.52
DDR1-247ENST00000502955 ITGBL1O95965 494 aaPredicted RBP18.31■□□□□ 0.52
DDR1-247ENST00000502955 U2AF1L5P0DN76 240 aaPredicted RBP18.31■□□□□ 0.52
DDR1-247ENST00000502955 ALDH1B1P30837 517 aa18.31■□□□□ 0.52
DDR1-247ENST00000502955 U2AF1Q01081 240 aaKnown RBP eCLIP18.31■□□□□ 0.52
DDR1-247ENST00000502955 ZNF277Q9NRM2 450 aaPredicted RBP18.31■□□□□ 0.52
DDR1-247ENST00000502955 ZNF541Q9H0D2 1346 aa18.3■□□□□ 0.52
DDR1-247ENST00000502955 FZD9O00144 591 aa18.3■□□□□ 0.52
DDR1-247ENST00000502955 PPP2R1AP30153 589 aa18.3■□□□□ 0.52
DDR1-247ENST00000502955 TAF7Q15545 349 aaPredicted RBP18.3■□□□□ 0.52
DDR1-247ENST00000502955 CRY2Q49AN0 593 aa18.3■□□□□ 0.52
DDR1-247ENST00000502955 HACL1Q9UJ83 578 aa18.3■□□□□ 0.52
DDR1-247ENST00000502955 TMEM88BA6NKF7 163 aa18.29■□□□□ 0.52
DDR1-247ENST00000502955 IARSP41252 1262 aaKnown RBP18.29■□□□□ 0.52
DDR1-247ENST00000502955 DCTN1Q14203 1278 aa18.29■□□□□ 0.52
DDR1-247ENST00000502955 HLFQ16534 295 aa18.29■□□□□ 0.52
DDR1-247ENST00000502955 PNMA8AQ86V59 439 aaPredicted RBP18.29■□□□□ 0.52
DDR1-247ENST00000502955 PSMD1Q99460 953 aa18.29■□□□□ 0.52
DDR1-247ENST00000502955 OLFM4Q6UX06 510 aa18.28■□□□□ 0.52
DDR1-247ENST00000502955 RIC1Q4ADV7 1423 aa18.28■□□□□ 0.52
DDR1-247ENST00000502955 ERVV-1B6SEH8 477 aa18.27■□□□□ 0.52
DDR1-247ENST00000502955 FOXN1O15353 648 aa18.27■□□□□ 0.52
DDR1-247ENST00000502955 EPHX2P34913 555 aa18.27■□□□□ 0.52
DDR1-247ENST00000502955 GPC2Q8N158 579 aa18.27■□□□□ 0.52
DDR1-247ENST00000502955 NYXQ9GZU5 481 aa18.27■□□□□ 0.52
DDR1-247ENST00000502955 PRDM10Q9NQV6 1147 aa18.27■□□□□ 0.52
DDR1-247ENST00000502955 NUP98P52948 1817 aa18.27■□□□□ 0.52
DDR1-247ENST00000502955 IBTKQ9P2D0 1353 aaPredicted RBP18.27■□□□□ 0.51
DDR1-247ENST00000502955 KDM3BQ7LBC6 1761 aa18.27■□□□□ 0.51
DDR1-247ENST00000502955 EAPPQ56P03 285 aaPredicted RBP18.26■□□□□ 0.51
DDR1-247ENST00000502955 CC2D2BQ6DHV5 1058 aa18.26■□□□□ 0.51
DDR1-247ENST00000502955 SYNE4Q8N205 404 aa18.26■□□□□ 0.51
DDR1-247ENST00000502955 GTF2E1P29083 439 aaPredicted RBP18.25■□□□□ 0.51
DDR1-247ENST00000502955 VEGFBP49765 207 aa18.25■□□□□ 0.51
DDR1-247ENST00000502955 ABCC12Q96J65 1359 aa18.25■□□□□ 0.51
DDR1-247ENST00000502955 RNF123Q5XPI4 1314 aa18.24■□□□□ 0.51
DDR1-247ENST00000502955 DLG5Q8TDM6 1919 aa18.24■□□□□ 0.51
DDR1-247ENST00000502955 RASSF10A6NK89 507 aa18.24■□□□□ 0.51
DDR1-247ENST00000502955 FAM177BA6PVY3 158 aa18.24■□□□□ 0.51
DDR1-247ENST00000502955 HOXA10P31260 410 aaPredicted RBP18.24■□□□□ 0.51
DDR1-247ENST00000502955 GRIPAP1Q4V328 841 aa18.24■□□□□ 0.51
DDR1-247ENST00000502955 PNISRQ8TF01 805 aaKnown RBP18.24■□□□□ 0.51
DDR1-247ENST00000502955 MAP3K15Q6ZN16 1313 aa18.23■□□□□ 0.51
DDR1-247ENST00000502955 CTCFP49711 727 aaPredicted RBP18.23■□□□□ 0.51
DDR1-247ENST00000502955 CNTROBQ8N137 903 aa18.23■□□□□ 0.51
DDR1-247ENST00000502955 JDP2Q8WYK2 163 aa18.23■□□□□ 0.51
DDR1-247ENST00000502955 WBP1LQ9NX94 342 aa18.23■□□□□ 0.51
DDR1-247ENST00000502955 MIS18AQ9NYP9 233 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms