RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 ST5P78524 1137 aa8.16□□□□□ -1.1
LSM3P4-201ENST00000502948 RIC1Q4ADV7 1423 aa8.16□□□□□ -1.1
LSM3P4-201ENST00000502948 CNBD1Q8NA66 436 aa8.16□□□□□ -1.1
LSM3P4-201ENST00000502948 IBTKQ9P2D0 1353 aaPredicted RBP8.15□□□□□ -1.1
LSM3P4-201ENST00000502948 POTECB2RU33 542 aa8.15□□□□□ -1.1
LSM3P4-201ENST00000502948 A1BGP04217 495 aa8.15□□□□□ -1.1
LSM3P4-201ENST00000502948 PPP2R1AP30153 589 aa8.15□□□□□ -1.1
LSM3P4-201ENST00000502948 RASSF7Q02833 373 aa8.15□□□□□ -1.1
LSM3P4-201ENST00000502948 GRIPAP1Q4V328 841 aa8.15□□□□□ -1.1
LSM3P4-201ENST00000502948 TPTE2Q6XPS3 522 aa8.15□□□□□ -1.1
LSM3P4-201ENST00000502948 DZIP3Q86Y13 1208 aaKnown RBP8.15□□□□□ -1.1
LSM3P4-201ENST00000502948 PNISRQ8TF01 805 aaKnown RBP8.15□□□□□ -1.1
LSM3P4-201ENST00000502948 C7orf43Q8WVR3 580 aa8.15□□□□□ -1.1
LSM3P4-201ENST00000502948 RTF1Q92541 710 aaKnown RBP8.15□□□□□ -1.1
LSM3P4-201ENST00000502948 L3MBTL3Q96JM7 780 aaPredicted RBP8.15□□□□□ -1.1
LSM3P4-201ENST00000502948 TAOK3Q9H2K8 898 aa8.15□□□□□ -1.1
LSM3P4-201ENST00000502948 TBC1D2BQ9UPU7 963 aa8.15□□□□□ -1.1
LSM3P4-201ENST00000502948 USP16Q9Y5T5 823 aa8.15□□□□□ -1.1
LSM3P4-201ENST00000502948 ERVV-1B6SEH8 477 aa8.14□□□□□ -1.11
LSM3P4-201ENST00000502948 TAF7Q15545 349 aaPredicted RBP8.14□□□□□ -1.11
LSM3P4-201ENST00000502948 ERFEQ4G0M1 354 aa8.14□□□□□ -1.11
LSM3P4-201ENST00000502948 BICDL1Q6ZP65 573 aa8.14□□□□□ -1.11
LSM3P4-201ENST00000502948 ADAMTSL1Q8N6G6 1762 aa8.14□□□□□ -1.11
LSM3P4-201ENST00000502948 SNED1Q8TER0 1413 aa8.13□□□□□ -1.11
LSM3P4-201ENST00000502948 ERBB4Q15303 1308 aa8.13□□□□□ -1.11
LSM3P4-201ENST00000502948 IQCA1LA6NCM1 817 aa8.13□□□□□ -1.11
LSM3P4-201ENST00000502948 KCNQ3O43525 872 aa8.13□□□□□ -1.11
LSM3P4-201ENST00000502948 C21orf2O43822 256 aa8.13□□□□□ -1.11
LSM3P4-201ENST00000502948 U2AF1L5P0DN76 240 aaPredicted RBP8.13□□□□□ -1.11
LSM3P4-201ENST00000502948 NPR1P16066 1061 aa8.13□□□□□ -1.11
LSM3P4-201ENST00000502948 ALDH1B1P30837 517 aa8.13□□□□□ -1.11
LSM3P4-201ENST00000502948 U2AF1Q01081 240 aaKnown RBP eCLIP8.13□□□□□ -1.11
LSM3P4-201ENST00000502948 CRY2Q49AN0 593 aa8.13□□□□□ -1.11
LSM3P4-201ENST00000502948 CC2D2BQ6DHV5 1058 aa8.13□□□□□ -1.11
LSM3P4-201ENST00000502948 PRPF40BQ6NWY9 871 aaKnown RBP8.13□□□□□ -1.11
LSM3P4-201ENST00000502948 RTKN2Q8IZC4 609 aa8.13□□□□□ -1.11
LSM3P4-201ENST00000502948 ZNF622Q969S3 477 aaKnown RBP eCLIP8.13□□□□□ -1.11
LSM3P4-201ENST00000502948 PNNQ9H307 717 aaKnown RBP8.13□□□□□ -1.11
LSM3P4-201ENST00000502948 NBPF26B4DH59 902 aa8.12□□□□□ -1.11
LSM3P4-201ENST00000502948 CCDC93Q567U6 631 aa8.12□□□□□ -1.11
LSM3P4-201ENST00000502948 NBPF10Q6P3W6 841 aaKnown RBP8.12□□□□□ -1.11
LSM3P4-201ENST00000502948 NBPF5PQ86XG9 351 aaPredicted RBP8.12□□□□□ -1.11
LSM3P4-201ENST00000502948 NBPF15Q8N660 670 aa8.12□□□□□ -1.11
LSM3P4-201ENST00000502948 CREBZFQ9NS37 354 aa8.12□□□□□ -1.11
LSM3P4-201ENST00000502948 BABAM1Q9NWV8 329 aa8.12□□□□□ -1.11
LSM3P4-201ENST00000502948 NEFMP07197 916 aa8.11□□□□□ -1.11
LSM3P4-201ENST00000502948 HOXA10P31260 410 aaPredicted RBP8.11□□□□□ -1.11
LSM3P4-201ENST00000502948 FKBP4Q02790 459 aaKnown RBP eCLIP8.11□□□□□ -1.11
LSM3P4-201ENST00000502948 CHADLQ6NUI6 762 aa8.11□□□□□ -1.11
LSM3P4-201ENST00000502948 MCM10Q7L590 875 aa8.11□□□□□ -1.11
LSM3P4-201ENST00000502948 PLEKHF1Q96S99 279 aa8.11□□□□□ -1.11
LSM3P4-201ENST00000502948 PSMD1Q99460 953 aa8.11□□□□□ -1.11
LSM3P4-201ENST00000502948 NYXQ9GZU5 481 aa8.11□□□□□ -1.11
LSM3P4-201ENST00000502948 VPS33BQ9H267 617 aa8.11□□□□□ -1.11
LSM3P4-201ENST00000502948 ANKRD36CQ5JPF3 1778 aa8.1□□□□□ -1.11
LSM3P4-201ENST00000502948 PCNTO95613 3336 aa8.1□□□□□ -1.11
LSM3P4-201ENST00000502948 RNF123Q5XPI4 1314 aa8.1□□□□□ -1.11
LSM3P4-201ENST00000502948 PASKQ96RG2 1323 aa8.1□□□□□ -1.11
LSM3P4-201ENST00000502948 FZD9O00144 591 aa8.1□□□□□ -1.11
LSM3P4-201ENST00000502948 NPHP1O15259 732 aa8.1□□□□□ -1.11
LSM3P4-201ENST00000502948 LDHDQ86WU2 507 aa8.1□□□□□ -1.11
LSM3P4-201ENST00000502948 NIP7Q9Y221 180 aaKnown RBP eCLIP8.1□□□□□ -1.11
LSM3P4-201ENST00000502948 ZNF330Q9Y3S2 320 aaPredicted RBP8.1□□□□□ -1.11
LSM3P4-201ENST00000502948 MAP3K15Q6ZN16 1313 aa8.09□□□□□ -1.11
LSM3P4-201ENST00000502948 PRAMEF22A3QJZ6 481 aa8.09□□□□□ -1.11
LSM3P4-201ENST00000502948 EIF4A1P60842 406 aaKnown RBP8.09□□□□□ -1.11
LSM3P4-201ENST00000502948 PNMA8AQ86V59 439 aaPredicted RBP8.09□□□□□ -1.11
LSM3P4-201ENST00000502948 DDNO94850 711 aaPredicted RBP8.08□□□□□ -1.12
LSM3P4-201ENST00000502948 ITGBL1O95965 494 aaPredicted RBP8.08□□□□□ -1.12
LSM3P4-201ENST00000502948 HTRA3P83110 453 aa8.08□□□□□ -1.12
LSM3P4-201ENST00000502948 NFE2L2Q16236 605 aa8.08□□□□□ -1.12
LSM3P4-201ENST00000502948 HLFQ16534 295 aa8.08□□□□□ -1.12
LSM3P4-201ENST00000502948 SLC10A5Q5PT55 438 aa8.08□□□□□ -1.12
LSM3P4-201ENST00000502948 COL13A1Q5TAT6 717 aaPredicted RBP8.08□□□□□ -1.12
LSM3P4-201ENST00000502948 ZNF34Q8IZ26 560 aa8.08□□□□□ -1.12
LSM3P4-201ENST00000502948 GPC2Q8N158 579 aa8.08□□□□□ -1.12
LSM3P4-201ENST00000502948 CRAMP1Q96RY5 1269 aa8.08□□□□□ -1.12
LSM3P4-201ENST00000502948 TAF1DQ9H5J8 278 aaPredicted RBP8.08□□□□□ -1.12
LSM3P4-201ENST00000502948 CNTNAP1P78357 1384 aa8.08□□□□□ -1.12
LSM3P4-201ENST00000502948 IARSP41252 1262 aaKnown RBP8.07□□□□□ -1.12
LSM3P4-201ENST00000502948 DCTN1Q14203 1278 aa8.07□□□□□ -1.12
LSM3P4-201ENST00000502948 PARP10Q53GL7 1025 aa8.07□□□□□ -1.12
LSM3P4-201ENST00000502948 GIGYF2Q6Y7W6 1299 aaKnown RBP8.07□□□□□ -1.12
LSM3P4-201ENST00000502948 CCDC24Q8N4L8 307 aa8.07□□□□□ -1.12
LSM3P4-201ENST00000502948 HACL1Q9UJ83 578 aa8.07□□□□□ -1.12
LSM3P4-201ENST00000502948 THSD7BQ9C0I4 1608 aa8.07□□□□□ -1.12
LSM3P4-201ENST00000502948 TRPM7Q96QT4 1865 aa8.06□□□□□ -1.12
LSM3P4-201ENST00000502948 TMEM88BA6NKF7 163 aa8.06□□□□□ -1.12
LSM3P4-201ENST00000502948 HSPA1AP0DMV8 641 aaKnown RBP8.06□□□□□ -1.12
LSM3P4-201ENST00000502948 HSPA1BP0DMV9 641 aaKnown RBP8.06□□□□□ -1.12
LSM3P4-201ENST00000502948 GTF2E1P29083 439 aaPredicted RBP8.06□□□□□ -1.12
LSM3P4-201ENST00000502948 PIP4K2AP48426 406 aaPredicted RBP8.06□□□□□ -1.12
LSM3P4-201ENST00000502948 RALBP1Q15311 655 aa8.06□□□□□ -1.12
LSM3P4-201ENST00000502948 KIF6Q6ZMV9 814 aa8.06□□□□□ -1.12
LSM3P4-201ENST00000502948 LRP10Q7Z4F1 713 aa8.06□□□□□ -1.12
LSM3P4-201ENST00000502948 PPP1R42Q7Z4L9 355 aa8.06□□□□□ -1.12
LSM3P4-201ENST00000502948 JDP2Q8WYK2 163 aa8.06□□□□□ -1.12
LSM3P4-201ENST00000502948 LAMB2P55268 1798 aa8.06□□□□□ -1.12
LSM3P4-201ENST00000502948 UBN2Q6ZU65 1347 aa8.05□□□□□ -1.12
LSM3P4-201ENST00000502948 MAPK8IP3Q9UPT6 1336 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms