RNA–Protein interactions for RNA: ENST00000502741.5

SPOCK3-205, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,032 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-205ENST00000502741 NPHP1O15259 732 aa29.68■■■□□ 2.34
SPOCK3-205ENST00000502741 DDNO94850 711 aaPredicted RBP29.68■■■□□ 2.34
SPOCK3-205ENST00000502741 POTEIP0CG38 1075 aa29.68■■■□□ 2.34
SPOCK3-205ENST00000502741 POTEJP0CG39 1038 aa29.68■■■□□ 2.34
SPOCK3-205ENST00000502741 SRGNP10124 158 aa29.68■■■□□ 2.34
SPOCK3-205ENST00000502741 NPM2Q86SE8 214 aaKnown RBP29.68■■■□□ 2.34
SPOCK3-205ENST00000502741 ARFGEF2Q9Y6D5 1785 aa29.67■■■□□ 2.34
SPOCK3-205ENST00000502741 ST5P78524 1137 aa29.67■■■□□ 2.34
SPOCK3-205ENST00000502741 CHADLQ6NUI6 762 aa29.67■■■□□ 2.34
SPOCK3-205ENST00000502741 DZIP3Q86Y13 1208 aaKnown RBP29.67■■■□□ 2.34
SPOCK3-205ENST00000502741 PIP4K2AP48426 406 aaPredicted RBP29.66■■■□□ 2.34
SPOCK3-205ENST00000502741 NPC1L1Q9UHC9 1359 aa29.65■■■□□ 2.34
SPOCK3-205ENST00000502741 BTBD11A6QL63 1104 aa29.65■■■□□ 2.34
SPOCK3-205ENST00000502741 MASTLQ96GX5 879 aa29.65■■■□□ 2.34
SPOCK3-205ENST00000502741 PHACTR3Q96KR7 559 aa29.65■■■□□ 2.34
SPOCK3-205ENST00000502741 USP16Q9Y5T5 823 aa29.64■■■□□ 2.34
SPOCK3-205ENST00000502741 CREBZFQ9NS37 354 aa29.63■■■□□ 2.33
SPOCK3-205ENST00000502741 MKRN1Q9UHC7 482 aaKnown RBP29.63■■■□□ 2.33
SPOCK3-205ENST00000502741 PRAMEF22A3QJZ6 481 aa29.62■■■□□ 2.33
SPOCK3-205ENST00000502741 PRKAR2BP31323 418 aa29.62■■■□□ 2.33
SPOCK3-205ENST00000502741 SOGA3Q5TF21 947 aa29.62■■■□□ 2.33
SPOCK3-205ENST00000502741 NBPF5PQ86XG9 351 aaPredicted RBP29.6■■■□□ 2.33
SPOCK3-205ENST00000502741 C7orf43Q8WVR3 580 aa29.6■■■□□ 2.33
SPOCK3-205ENST00000502741 RSPH6AQ9H0K4 717 aa29.6■■■□□ 2.33
SPOCK3-205ENST00000502741 CLEC4GQ6UXB4 293 aa29.57■■■□□ 2.32
SPOCK3-205ENST00000502741 CCDC93Q567U6 631 aa29.56■■■□□ 2.32
SPOCK3-205ENST00000502741 L3MBTL3Q96JM7 780 aaPredicted RBP29.56■■■□□ 2.32
SPOCK3-205ENST00000502741 SCN4AP35499 1836 aa29.55■■■□□ 2.32
SPOCK3-205ENST00000502741 PASKQ96RG2 1323 aa29.55■■■□□ 2.32
SPOCK3-205ENST00000502741 IQCA1LA6NCM1 817 aa29.55■■■□□ 2.32
SPOCK3-205ENST00000502741 NPR1P16066 1061 aa29.55■■■□□ 2.32
SPOCK3-205ENST00000502741 TAF1DQ9H5J8 278 aaPredicted RBP29.55■■■□□ 2.32
SPOCK3-205ENST00000502741 SNRPA1P09661 255 aaKnown RBP29.54■■■□□ 2.32
SPOCK3-205ENST00000502741 LDHDQ86WU2 507 aa29.54■■■□□ 2.32
SPOCK3-205ENST00000502741 ZNF652Q9Y2D9 606 aa29.54■■■□□ 2.32
SPOCK3-205ENST00000502741 CNTNAP1P78357 1384 aa29.53■■■□□ 2.32
SPOCK3-205ENST00000502741 KLRG2A4D1S0 409 aaPredicted RBP29.53■■■□□ 2.32
SPOCK3-205ENST00000502741 OLFM4Q6UX06 510 aa29.53■■■□□ 2.32
SPOCK3-205ENST00000502741 MCM10Q7L590 875 aa29.53■■■□□ 2.32
SPOCK3-205ENST00000502741 ZNF541Q9H0D2 1346 aa29.52■■■□□ 2.32
SPOCK3-205ENST00000502741 NBPF26B4DH59 902 aa29.52■■■□□ 2.32
SPOCK3-205ENST00000502741 FKBP4Q02790 459 aaKnown RBP eCLIP29.52■■■□□ 2.32
SPOCK3-205ENST00000502741 NBPF10Q6P3W6 841 aaKnown RBP29.52■■■□□ 2.32
SPOCK3-205ENST00000502741 NBPF15Q8N660 670 aa29.52■■■□□ 2.32
SPOCK3-205ENST00000502741 ZNF277Q9NRM2 450 aaPredicted RBP29.52■■■□□ 2.32
SPOCK3-205ENST00000502741 CFAP53Q96M91 514 aa29.51■■■□□ 2.31
SPOCK3-205ENST00000502741 NIP7Q9Y221 180 aaKnown RBP eCLIP29.51■■■□□ 2.31
SPOCK3-205ENST00000502741 FAM177BA6PVY3 158 aa29.49■■■□□ 2.31
SPOCK3-205ENST00000502741 FOXN1O15353 648 aa29.49■■■□□ 2.31
SPOCK3-205ENST00000502741 TPTE2Q6XPS3 522 aa29.49■■■□□ 2.31
SPOCK3-205ENST00000502741 RTF1Q92541 710 aaKnown RBP29.49■■■□□ 2.31
SPOCK3-205ENST00000502741 DCTN1Q14203 1278 aa29.48■■■□□ 2.31
SPOCK3-205ENST00000502741 EAPPQ56P03 285 aaPredicted RBP29.48■■■□□ 2.31
SPOCK3-205ENST00000502741 ITGBL1O95965 494 aaPredicted RBP29.47■■■□□ 2.31
SPOCK3-205ENST00000502741 U2AF1L5P0DN76 240 aaPredicted RBP29.46■■■□□ 2.31
SPOCK3-205ENST00000502741 U2AF1Q01081 240 aaKnown RBP eCLIP29.46■■■□□ 2.31
SPOCK3-205ENST00000502741 HACL1Q9UJ83 578 aa29.46■■■□□ 2.31
SPOCK3-205ENST00000502741 NUDCQ9Y266 331 aa29.46■■■□□ 2.31
SPOCK3-205ENST00000502741 ADAMTSL1Q8N6G6 1762 aa29.45■■■□□ 2.31
SPOCK3-205ENST00000502741 RGL2O15211 777 aa29.45■■■□□ 2.31
SPOCK3-205ENST00000502741 HLFQ16534 295 aa29.45■■■□□ 2.31
SPOCK3-205ENST00000502741 RTKN2Q8IZC4 609 aa29.45■■■□□ 2.31
SPOCK3-205ENST00000502741 TMEM88BA6NKF7 163 aa29.44■■■□□ 2.3
SPOCK3-205ENST00000502741 VEGFBP49765 207 aa29.44■■■□□ 2.3
SPOCK3-205ENST00000502741 EPHX2P34913 555 aa29.43■■■□□ 2.3
SPOCK3-205ENST00000502741 CLEC11AQ9Y240 323 aa29.43■■■□□ 2.3
SPOCK3-205ENST00000502741 IARSP41252 1262 aaKnown RBP29.42■■■□□ 2.3
SPOCK3-205ENST00000502741 SYNE4Q8N205 404 aa29.42■■■□□ 2.3
SPOCK3-205ENST00000502741 RNF123Q5XPI4 1314 aa29.42■■■□□ 2.3
SPOCK3-205ENST00000502741 FZD9O00144 591 aa29.41■■■□□ 2.3
SPOCK3-205ENST00000502741 SNED1Q8TER0 1413 aa29.4■■■□□ 2.3
SPOCK3-205ENST00000502741 PPP2R1AP30153 589 aa29.4■■■□□ 2.3
SPOCK3-205ENST00000502741 ALDH1B1P30837 517 aa29.4■■■□□ 2.3
SPOCK3-205ENST00000502741 MIS18AQ9NYP9 233 aa29.4■■■□□ 2.3
SPOCK3-205ENST00000502741 ABCC12Q96J65 1359 aa29.39■■■□□ 2.3
SPOCK3-205ENST00000502741 LAMB4A4D0S4 1761 aa29.39■■■□□ 2.3
SPOCK3-205ENST00000502741 HTATSF1O43719 755 aaKnown RBP29.39■■■□□ 2.3
SPOCK3-205ENST00000502741 GTF2E1P29083 439 aaPredicted RBP29.39■■■□□ 2.3
SPOCK3-205ENST00000502741 PRDM10Q9NQV6 1147 aa29.39■■■□□ 2.3
SPOCK3-205ENST00000502741 TAF7Q15545 349 aaPredicted RBP29.38■■■□□ 2.29
SPOCK3-205ENST00000502741 MAP1SQ66K74 1059 aaPredicted RBP29.38■■■□□ 2.29
SPOCK3-205ENST00000502741 AIDAQ96BJ3 306 aa29.38■■■□□ 2.29
SPOCK3-205ENST00000502741 CTCFP49711 727 aaPredicted RBP29.37■■■□□ 2.29
SPOCK3-205ENST00000502741 NUTM1Q86Y26 1132 aa29.37■■■□□ 2.29
SPOCK3-205ENST00000502741 CRY2Q49AN0 593 aa29.36■■■□□ 2.29
SPOCK3-205ENST00000502741 PNMA8AQ86V59 439 aaPredicted RBP29.36■■■□□ 2.29
SPOCK3-205ENST00000502741 CNTROBQ8N137 903 aa29.36■■■□□ 2.29
SPOCK3-205ENST00000502741 GPC2Q8N158 579 aa29.36■■■□□ 2.29
SPOCK3-205ENST00000502741 NGEFQ8N5V2 710 aa29.36■■■□□ 2.29
SPOCK3-205ENST00000502741 COL4A5P29400 1685 aa29.36■■■□□ 2.29
SPOCK3-205ENST00000502741 PSMD1Q99460 953 aa29.35■■■□□ 2.29
SPOCK3-205ENST00000502741 WBP1LQ9NX94 342 aa29.35■■■□□ 2.29
SPOCK3-205ENST00000502741 NUP98P52948 1817 aa29.34■■■□□ 2.29
SPOCK3-205ENST00000502741 RASSF10A6NK89 507 aa29.33■■■□□ 2.29
SPOCK3-205ENST00000502741 JDP2Q8WYK2 163 aa29.33■■■□□ 2.29
SPOCK3-205ENST00000502741 NYXQ9GZU5 481 aa29.33■■■□□ 2.29
SPOCK3-205ENST00000502741 KDM3BQ7LBC6 1761 aa29.31■■■□□ 2.28
SPOCK3-205ENST00000502741 LTBP1Q14766 1721 aa29.31■■■□□ 2.28
SPOCK3-205ENST00000502741 MAP3K15Q6ZN16 1313 aa29.31■■■□□ 2.28
SPOCK3-205ENST00000502741 ERVV-1B6SEH8 477 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms