RNA–Protein interactions for RNA: ENST00000502734.1

COPB2-202, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-202ENST00000502734 RGL2O15211 777 aa11.91□□□□□ -0.5
COPB2-202ENST00000502734 RASSF7Q02833 373 aa11.91□□□□□ -0.5
COPB2-202ENST00000502734 DDX10Q13206 875 aaKnown RBP11.91□□□□□ -0.5
COPB2-202ENST00000502734 TPTE2Q6XPS3 522 aa11.91□□□□□ -0.5
COPB2-202ENST00000502734 NBPF5PQ86XG9 351 aaPredicted RBP11.91□□□□□ -0.5
COPB2-202ENST00000502734 C16orf71Q8IYS4 520 aaPredicted RBP11.91□□□□□ -0.5
COPB2-202ENST00000502734 MAPK8IP3Q9UPT6 1336 aa11.9□□□□□ -0.5
COPB2-202ENST00000502734 C21orf2O43822 256 aa11.9□□□□□ -0.5
COPB2-202ENST00000502734 CAPN15O75808 1086 aa11.9□□□□□ -0.5
COPB2-202ENST00000502734 EIF4A1P60842 406 aaKnown RBP11.9□□□□□ -0.5
COPB2-202ENST00000502734 CNKSR1Q969H4 720 aa11.9□□□□□ -0.5
COPB2-202ENST00000502734 THUMPD2Q9BTF0 503 aaKnown RBP11.9□□□□□ -0.5
COPB2-202ENST00000502734 ZNF219Q9P2Y4 722 aaPredicted RBP11.9□□□□□ -0.5
COPB2-202ENST00000502734 SIPA1L3O60292 1781 aaPredicted RBP11.9□□□□□ -0.51
COPB2-202ENST00000502734 BRCA1P38398 1863 aaKnown RBP11.89□□□□□ -0.51
COPB2-202ENST00000502734 AFDNP55196 1824 aaKnown RBP11.89□□□□□ -0.51
COPB2-202ENST00000502734 MYCNP04198 464 aaPredicted RBP11.89□□□□□ -0.51
COPB2-202ENST00000502734 SRGNP10124 158 aa11.89□□□□□ -0.51
COPB2-202ENST00000502734 PRELPP51888 382 aa11.89□□□□□ -0.51
COPB2-202ENST00000502734 RIPK4P57078 832 aa11.89□□□□□ -0.51
COPB2-202ENST00000502734 STYK1Q6J9G0 422 aa11.89□□□□□ -0.51
COPB2-202ENST00000502734 NGEFQ8N5V2 710 aa11.89□□□□□ -0.51
COPB2-202ENST00000502734 RBM46Q8TBY0 533 aaKnown RBP11.89□□□□□ -0.51
COPB2-202ENST00000502734 MASTLQ96GX5 879 aa11.89□□□□□ -0.51
COPB2-202ENST00000502734 NIP7Q9Y221 180 aaKnown RBP eCLIP11.89□□□□□ -0.51
COPB2-202ENST00000502734 RRP7AQ9Y3A4 280 aaKnown RBP11.89□□□□□ -0.51
COPB2-202ENST00000502734 ZC3H4Q9UPT8 1303 aaKnown RBP11.88□□□□□ -0.51
COPB2-202ENST00000502734 ARFGEF1Q9Y6D6 1849 aa11.88□□□□□ -0.51
COPB2-202ENST00000502734 GLTPD2A6NH11 291 aa11.88□□□□□ -0.51
COPB2-202ENST00000502734 NFKBIEO00221 500 aa11.88□□□□□ -0.51
COPB2-202ENST00000502734 APLP1P51693 650 aa11.88□□□□□ -0.51
COPB2-202ENST00000502734 HLFQ16534 295 aa11.88□□□□□ -0.51
COPB2-202ENST00000502734 NRXN2Q9P2S2 1712 aa11.88□□□□□ -0.51
COPB2-202ENST00000502734 KLRG2A4D1S0 409 aaPredicted RBP11.87□□□□□ -0.51
COPB2-202ENST00000502734 FAM177BA6PVY3 158 aa11.87□□□□□ -0.51
COPB2-202ENST00000502734 ERVV-1B6SEH8 477 aa11.87□□□□□ -0.51
COPB2-202ENST00000502734 GTF2E1P29083 439 aaPredicted RBP11.87□□□□□ -0.51
COPB2-202ENST00000502734 DPY19L2Q6NUT2 758 aa11.87□□□□□ -0.51
COPB2-202ENST00000502734 MYL6BP14649 208 aa11.86□□□□□ -0.51
COPB2-202ENST00000502734 VEGFAP15692 232 aaPredicted RBP11.86□□□□□ -0.51
COPB2-202ENST00000502734 NPR1P16066 1061 aa11.86□□□□□ -0.51
COPB2-202ENST00000502734 TMPOP42166 694 aaKnown RBP11.86□□□□□ -0.51
COPB2-202ENST00000502734 FSTL1Q12841 308 aa11.86□□□□□ -0.51
COPB2-202ENST00000502734 SOGA3Q5TF21 947 aa11.86□□□□□ -0.51
COPB2-202ENST00000502734 FOXD4L1Q9NU39 408 aa11.86□□□□□ -0.51
COPB2-202ENST00000502734 BABAM1Q9NWV8 329 aa11.86□□□□□ -0.51
COPB2-202ENST00000502734 TSPYL4Q9UJ04 414 aa11.86□□□□□ -0.51
COPB2-202ENST00000502734 ALDH1B1P30837 517 aa11.85□□□□□ -0.51
COPB2-202ENST00000502734 LMOD3Q0VAK6 560 aa11.85□□□□□ -0.51
COPB2-202ENST00000502734 ERFEQ4G0M1 354 aa11.85□□□□□ -0.51
COPB2-202ENST00000502734 PRPF40BQ6NWY9 871 aaKnown RBP11.85□□□□□ -0.51
COPB2-202ENST00000502734 KIF6Q6ZMV9 814 aa11.85□□□□□ -0.51
COPB2-202ENST00000502734 TTLL7Q6ZT98 887 aa11.85□□□□□ -0.51
COPB2-202ENST00000502734 C7orf43Q8WVR3 580 aa11.85□□□□□ -0.51
COPB2-202ENST00000502734 TAOK3Q9H2K8 898 aa11.85□□□□□ -0.51
COPB2-202ENST00000502734 MAP3K15Q6ZN16 1313 aa11.85□□□□□ -0.51
COPB2-202ENST00000502734 MYBBP1AQ9BQG0 1328 aaKnown RBP11.85□□□□□ -0.51
COPB2-202ENST00000502734 EIF2S2P20042 333 aaKnown RBP11.84□□□□□ -0.51
COPB2-202ENST00000502734 NEUROD2Q15784 382 aa11.84□□□□□ -0.51
COPB2-202ENST00000502734 NYXQ9GZU5 481 aa11.84□□□□□ -0.51
COPB2-202ENST00000502734 SPINK5Q9NQ38 1064 aaPredicted RBP11.84□□□□□ -0.51
COPB2-202ENST00000502734 LTBP3Q9NS15 1303 aa11.84□□□□□ -0.51
COPB2-202ENST00000502734 SBF1O95248 1867 aa11.83□□□□□ -0.52
COPB2-202ENST00000502734 DNAJC5GQ8N7S2 189 aa11.83□□□□□ -0.52
COPB2-202ENST00000502734 SMC1BQ8NDV3 1235 aa11.83□□□□□ -0.52
COPB2-202ENST00000502734 ERBB4Q15303 1308 aa11.83□□□□□ -0.52
COPB2-202ENST00000502734 WDR43Q15061 677 aaKnown RBP eCLIP11.82□□□□□ -0.52
COPB2-202ENST00000502734 CCDC93Q567U6 631 aa11.82□□□□□ -0.52
COPB2-202ENST00000502734 CCDC146Q8IYE0 955 aa11.82□□□□□ -0.52
COPB2-202ENST00000502734 ZNF34Q8IZ26 560 aa11.82□□□□□ -0.52
COPB2-202ENST00000502734 RTKN2Q8IZC4 609 aa11.82□□□□□ -0.52
COPB2-202ENST00000502734 RUNDC1Q96C34 613 aa11.82□□□□□ -0.52
COPB2-202ENST00000502734 ZBTB3Q9H5J0 574 aa11.82□□□□□ -0.52
COPB2-202ENST00000502734 ADAMTS8Q9UP79 889 aa11.82□□□□□ -0.52
COPB2-202ENST00000502734 POTECB2RU33 542 aa11.81□□□□□ -0.52
COPB2-202ENST00000502734 GPTP24298 496 aa11.81□□□□□ -0.52
COPB2-202ENST00000502734 PDIA6Q15084 440 aa11.81□□□□□ -0.52
COPB2-202ENST00000502734 SUSD4Q5VX71 490 aa11.81□□□□□ -0.52
COPB2-202ENST00000502734 GIGYF2Q6Y7W6 1299 aaKnown RBP11.81□□□□□ -0.52
COPB2-202ENST00000502734 NUTM1Q86Y26 1132 aa11.81□□□□□ -0.52
COPB2-202ENST00000502734 SCN7AQ01118 1682 aa11.81□□□□□ -0.52
COPB2-202ENST00000502734 CHL1O00533 1208 aa11.8□□□□□ -0.52
COPB2-202ENST00000502734 FKBP4Q02790 459 aaKnown RBP eCLIP11.8□□□□□ -0.52
COPB2-202ENST00000502734 CRY2Q49AN0 593 aa11.8□□□□□ -0.52
COPB2-202ENST00000502734 PPP1R42Q7Z4L9 355 aa11.8□□□□□ -0.52
COPB2-202ENST00000502734 TRIM35Q9UPQ4 493 aa11.8□□□□□ -0.52
COPB2-202ENST00000502734 LAS1LQ9Y4W2 734 aaKnown RBP11.8□□□□□ -0.52
COPB2-202ENST00000502734 ANKRD31Q8N7Z5 1873 aa11.8□□□□□ -0.52
COPB2-202ENST00000502734 DDNO94850 711 aaPredicted RBP11.79□□□□□ -0.52
COPB2-202ENST00000502734 HOXA10P31260 410 aaPredicted RBP11.79□□□□□ -0.52
COPB2-202ENST00000502734 PARP10Q53GL7 1025 aa11.79□□□□□ -0.52
COPB2-202ENST00000502734 OLFM4Q6UX06 510 aa11.79□□□□□ -0.52
COPB2-202ENST00000502734 COPS6Q7L5N1 327 aa11.79□□□□□ -0.52
COPB2-202ENST00000502734 LRP10Q7Z4F1 713 aa11.79□□□□□ -0.52
COPB2-202ENST00000502734 SYNE4Q8N205 404 aa11.79□□□□□ -0.52
COPB2-202ENST00000502734 NECTIN2Q92692 538 aa11.79□□□□□ -0.52
COPB2-202ENST00000502734 RPGRQ92834 1020 aaKnown RBP11.79□□□□□ -0.52
COPB2-202ENST00000502734 PRKRIP1Q9H875 184 aaPredicted RBP11.79□□□□□ -0.52
COPB2-202ENST00000502734 DLEC1Q9Y238 1755 aa11.79□□□□□ -0.52
COPB2-202ENST00000502734 SLX4Q8IY92 1834 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms