RNA–Protein interactions for RNA: ENST00000502669.5

SH3TC1-206, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 3,484 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-206ENST00000502669 KSR2Q6VAB6 950 aa18.05■□□□□ 0.48
SH3TC1-206ENST00000502669 CABLES1Q8TDN4 633 aa18.05■□□□□ 0.48
SH3TC1-206ENST00000502669 SNX14Q9Y5W7 946 aa18.05■□□□□ 0.48
SH3TC1-206ENST00000502669 CYP2E1P05181 493 aaPredicted RBP18.05■□□□□ 0.48
SH3TC1-206ENST00000502669 MYD88Q99836 296 aa18.05■□□□□ 0.48
SH3TC1-206ENST00000502669 BABAM1Q9NWV8 329 aa18.05■□□□□ 0.48
SH3TC1-206ENST00000502669 CHRNA2Q15822 529 aa18.04■□□□□ 0.48
SH3TC1-206ENST00000502669 TAOK2Q9UL54 1235 aa18.04■□□□□ 0.48
SH3TC1-206ENST00000502669 PI4K2BQ8TCG2 481 aa18.04■□□□□ 0.48
SH3TC1-206ENST00000502669 PDRG1Q9NUG6 133 aa18.04■□□□□ 0.48
SH3TC1-206ENST00000502669 GADD45BO75293 160 aaPredicted RBP18.04■□□□□ 0.48
SH3TC1-206ENST00000502669 HSPA4P34932 840 aa18.04■□□□□ 0.48
SH3TC1-206ENST00000502669 NRKQ7Z2Y5 1582 aa18.04■□□□□ 0.48
SH3TC1-206ENST00000502669 GIGYF1O75420 1035 aaPredicted RBP18.03■□□□□ 0.48
SH3TC1-206ENST00000502669 NECAB1Q8N987 351 aa18.03■□□□□ 0.48
SH3TC1-206ENST00000502669 BICC1Q9H694 974 aaKnown RBP18.03■□□□□ 0.48
SH3TC1-206ENST00000502669 SALL3Q9BXA9 1300 aa18.03■□□□□ 0.48
SH3TC1-206ENST00000502669 GRM8O00222 908 aa18.03■□□□□ 0.48
SH3TC1-206ENST00000502669 BRD1O95696 1058 aa18.03■□□□□ 0.48
SH3TC1-206ENST00000502669 STK3Q13188 491 aa18.03■□□□□ 0.48
SH3TC1-206ENST00000502669 USP48Q86UV5 1035 aa18.03■□□□□ 0.48
SH3TC1-206ENST00000502669 FERMT3Q86UX7 667 aa18.03■□□□□ 0.48
SH3TC1-206ENST00000502669 NFATC2IPQ8NCF5 419 aa18.03■□□□□ 0.48
SH3TC1-206ENST00000502669 CNPY2Q9Y2B0 182 aa18.03■□□□□ 0.48
SH3TC1-206ENST00000502669 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.03■□□□□ 0.48
SH3TC1-206ENST00000502669 CYP46A1Q9Y6A2 500 aa18.03■□□□□ 0.48
SH3TC1-206ENST00000502669 DNTTIP2Q5QJE6 756 aaKnown RBP18.03■□□□□ 0.48
SH3TC1-206ENST00000502669 ERC1Q8IUD2 1116 aa18.03■□□□□ 0.48
SH3TC1-206ENST00000502669 LIMCH1Q9UPQ0 1083 aa18.03■□□□□ 0.48
SH3TC1-206ENST00000502669 ATP5J2-PTCD1G3V325 749 aa18.02■□□□□ 0.48
SH3TC1-206ENST00000502669 PTCD1O75127 700 aaKnown RBP18.02■□□□□ 0.48
SH3TC1-206ENST00000502669 SUCLG2Q96I99 432 aa18.02■□□□□ 0.48
SH3TC1-206ENST00000502669 DNAJC2Q99543 621 aaKnown RBP18.02■□□□□ 0.48
SH3TC1-206ENST00000502669 AXIN2Q9Y2T1 843 aa18.02■□□□□ 0.48
SH3TC1-206ENST00000502669 RGPD8O14715 1765 aaPredicted RBP18.02■□□□□ 0.48
SH3TC1-206ENST00000502669 RAD50Q92878 1312 aa18.02■□□□□ 0.48
SH3TC1-206ENST00000502669 ZNF445P59923 1031 aa18.02■□□□□ 0.48
SH3TC1-206ENST00000502669 ZSCAN30Q86W11 494 aa18.02■□□□□ 0.48
SH3TC1-206ENST00000502669 TSPY26PQ9H489 355 aa18.02■□□□□ 0.48
SH3TC1-206ENST00000502669 PTH1RQ03431 593 aa18.02■□□□□ 0.47
SH3TC1-206ENST00000502669 POLA2Q14181 598 aa18.02■□□□□ 0.47
SH3TC1-206ENST00000502669 COPS6Q7L5N1 327 aa18.02■□□□□ 0.47
SH3TC1-206ENST00000502669 XAGE3Q8WTP9 111 aa18.02■□□□□ 0.47
SH3TC1-206ENST00000502669 HYPKQ9NX55 129 aa18.02■□□□□ 0.47
SH3TC1-206ENST00000502669 TATP17735 454 aaPredicted RBP18.01■□□□□ 0.47
SH3TC1-206ENST00000502669 LRSAM1Q6UWE0 723 aa18.01■□□□□ 0.47
SH3TC1-206ENST00000502669 FAM227BQ96M60 508 aa18.01■□□□□ 0.47
SH3TC1-206ENST00000502669 CLEC17AQ6ZS10 378 aa18.01■□□□□ 0.47
SH3TC1-206ENST00000502669 NDUFB9Q9Y6M9 179 aa18■□□□□ 0.47
SH3TC1-206ENST00000502669 INTS4Q96HW7 963 aaKnown RBP18■□□□□ 0.47
SH3TC1-206ENST00000502669 PHF14O94880 888 aa18■□□□□ 0.47
SH3TC1-206ENST00000502669 ANKARQ7Z5J8 1434 aa17.99■□□□□ 0.47
SH3TC1-206ENST00000502669 GOLGA6L4A6NEF3 574 aa17.99■□□□□ 0.47
SH3TC1-206ENST00000502669 STX6O43752 255 aa17.99■□□□□ 0.47
SH3TC1-206ENST00000502669 HSP90B1P14625 803 aaKnown RBP17.99■□□□□ 0.47
SH3TC1-206ENST00000502669 ATF3P18847 181 aa17.99■□□□□ 0.47
SH3TC1-206ENST00000502669 FOSBP53539 338 aa17.99■□□□□ 0.47
SH3TC1-206ENST00000502669 ARHGEF25Q86VW2 580 aa17.99■□□□□ 0.47
SH3TC1-206ENST00000502669 LINS1Q8NG48 757 aa17.99■□□□□ 0.47
SH3TC1-206ENST00000502669 EDC3Q96F86 508 aaKnown RBP17.99■□□□□ 0.47
SH3TC1-206ENST00000502669 HOXB7P09629 217 aa17.99■□□□□ 0.47
SH3TC1-206ENST00000502669 CUL4AQ13619 759 aa17.99■□□□□ 0.47
SH3TC1-206ENST00000502669 NEUROD6Q96NK8 337 aa17.99■□□□□ 0.47
SH3TC1-206ENST00000502669 GJB2P29033 226 aa17.99■□□□□ 0.47
SH3TC1-206ENST00000502669 ADCK5Q3MIX3 580 aa17.99■□□□□ 0.47
SH3TC1-206ENST00000502669 LSG1Q9H089 658 aaKnown RBP17.99■□□□□ 0.47
SH3TC1-206ENST00000502669 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.98■□□□□ 0.47
SH3TC1-206ENST00000502669 ALDH1L1O75891 902 aa17.98■□□□□ 0.47
SH3TC1-206ENST00000502669 NMIQ13287 307 aaPredicted RBP17.98■□□□□ 0.47
SH3TC1-206ENST00000502669 UBE3BQ7Z3V4 1068 aa17.98■□□□□ 0.47
SH3TC1-206ENST00000502669 RBM8AQ9Y5S9 174 aaKnown RBP17.98■□□□□ 0.47
SH3TC1-206ENST00000502669 AOX1Q06278 1338 aa17.98■□□□□ 0.47
SH3TC1-206ENST00000502669 ADCY9O60503 1353 aa17.98■□□□□ 0.47
SH3TC1-206ENST00000502669 SYT1P21579 422 aa17.98■□□□□ 0.47
SH3TC1-206ENST00000502669 TLR7Q9NYK1 1049 aaKnown RBP17.98■□□□□ 0.47
SH3TC1-206ENST00000502669 R3HCC1Q9Y3T6 440 aaKnown RBP17.98■□□□□ 0.47
SH3TC1-206ENST00000502669 LARP1Q6PKG0 1096 aaKnown RBP17.97■□□□□ 0.47
SH3TC1-206ENST00000502669 RUFY3Q7L099 469 aa17.97■□□□□ 0.47
SH3TC1-206ENST00000502669 EAF2Q96CJ1 260 aaPredicted RBP17.97■□□□□ 0.47
SH3TC1-206ENST00000502669 EVI5LQ96CN4 794 aa17.97■□□□□ 0.47
SH3TC1-206ENST00000502669 ATP6V1DQ9Y5K8 247 aa17.97■□□□□ 0.47
SH3TC1-206ENST00000502669 DDX21Q9NR30 783 aaKnown RBP eCLIP17.97■□□□□ 0.47
SH3TC1-206ENST00000502669 A0A0G2JS52 829 aa17.96■□□□□ 0.47
SH3TC1-206ENST00000502669 LARGE1O95461 756 aa17.96■□□□□ 0.47
SH3TC1-206ENST00000502669 ZSCAN22P10073 491 aaPredicted RBP17.96■□□□□ 0.47
SH3TC1-206ENST00000502669 TTC41PQ6P2S7 1318 aa17.96■□□□□ 0.47
SH3TC1-206ENST00000502669 ZNF790Q6PG37 636 aa17.96■□□□□ 0.47
SH3TC1-206ENST00000502669 LARP1BQ659C4 914 aaKnown RBP17.96■□□□□ 0.47
SH3TC1-206ENST00000502669 RNF20Q5VTR2 975 aa17.95■□□□□ 0.46
SH3TC1-206ENST00000502669 PIK3C2AO00443 1686 aa17.95■□□□□ 0.46
SH3TC1-206ENST00000502669 BLOC1S2Q6QNY1 142 aa17.95■□□□□ 0.46
SH3TC1-206ENST00000502669 ZNF496Q96IT1 587 aaPredicted RBP17.95■□□□□ 0.46
SH3TC1-206ENST00000502669 CEMIPQ8WUJ3 1361 aa17.95■□□□□ 0.46
SH3TC1-206ENST00000502669 CABP4P57796 275 aa17.95■□□□□ 0.46
SH3TC1-206ENST00000502669 DNM1Q05193 864 aaKnown RBP17.95■□□□□ 0.46
SH3TC1-206ENST00000502669 KIF13AQ9H1H9 1805 aa17.94■□□□□ 0.46
SH3TC1-206ENST00000502669 FAM173BQ6P4H8 233 aa17.94■□□□□ 0.46
SH3TC1-206ENST00000502669 PPFIA3O75145 1194 aa17.94■□□□□ 0.46
SH3TC1-206ENST00000502669 ANKRD13DQ6ZTN6 518 aa17.94■□□□□ 0.46
SH3TC1-206ENST00000502669 USP16Q9Y5T5 823 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms