RNA–Protein interactions for RNA: ENST00000502492.5

SNF8-202, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNF8, Length 2,319 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-202ENST00000502492 SYCE3A1L190 88 aa27.84■■■□□ 2.05
SNF8-202ENST00000502492 PLEKHO1Q53GL0 409 aaPredicted RBP27.84■■■□□ 2.05
SNF8-202ENST00000502492 ZNF530Q6P9A1 599 aaPredicted RBP27.84■■■□□ 2.05
SNF8-202ENST00000502492 TTC41PQ6P2S7 1318 aa27.84■■■□□ 2.05
SNF8-202ENST00000502492 SLIT3O75094 1523 aa27.83■■■□□ 2.05
SNF8-202ENST00000502492 RGPD2P0DJD1 1756 aa27.83■■■□□ 2.05
SNF8-202ENST00000502492 SNX14Q9Y5W7 946 aa27.83■■■□□ 2.05
SNF8-202ENST00000502492 TTC14Q96N46 770 aa27.83■■■□□ 2.04
SNF8-202ENST00000502492 DBF4Q9UBU7 674 aaPredicted RBP27.83■■■□□ 2.04
SNF8-202ENST00000502492 GCP02774 474 aa27.82■■■□□ 2.04
SNF8-202ENST00000502492 WDR33Q9C0J8 1336 aaKnown RBP27.81■■■□□ 2.04
SNF8-202ENST00000502492 ANXA1P04083 346 aa27.81■■■□□ 2.04
SNF8-202ENST00000502492 AMOTQ4VCS5 1084 aa27.81■■■□□ 2.04
SNF8-202ENST00000502492 NCAPD2Q15021 1401 aa27.81■■■□□ 2.04
SNF8-202ENST00000502492 GLRX3O76003 335 aaKnown RBP27.8■■■□□ 2.04
SNF8-202ENST00000502492 MPRIPQ6WCQ1 1025 aa27.8■■■□□ 2.04
SNF8-202ENST00000502492 LRRC59Q96AG4 307 aaKnown RBP27.8■■■□□ 2.04
SNF8-202ENST00000502492 OVOS2A0A0G2JMS6 1433 aa27.8■■■□□ 2.04
SNF8-202ENST00000502492 ALDH1L1O75891 902 aa27.8■■■□□ 2.04
SNF8-202ENST00000502492 RNMTO43148 476 aaKnown RBP27.79■■■□□ 2.04
SNF8-202ENST00000502492 HEG1Q9ULI3 1381 aa27.79■■■□□ 2.04
SNF8-202ENST00000502492 RASEFQ8IZ41 740 aa27.78■■■□□ 2.04
SNF8-202ENST00000502492 KIAA1211Q6ZU35 1233 aa27.78■■■□□ 2.04
SNF8-202ENST00000502492 RPAP1Q9BWH6 1393 aaPredicted RBP27.77■■■□□ 2.04
SNF8-202ENST00000502492 GIGYF1O75420 1035 aaPredicted RBP27.76■■■□□ 2.04
SNF8-202ENST00000502492 CWC27Q6UX04 472 aaKnown RBP27.76■■■□□ 2.04
SNF8-202ENST00000502492 KSR2Q6VAB6 950 aa27.76■■■□□ 2.03
SNF8-202ENST00000502492 CLASRPQ8N2M8 674 aaKnown RBP27.76■■■□□ 2.03
SNF8-202ENST00000502492 CABLES1Q8TDN4 633 aa27.76■■■□□ 2.03
SNF8-202ENST00000502492 MAP3K2Q9Y2U5 619 aa27.76■■■□□ 2.03
SNF8-202ENST00000502492 MSNP26038 577 aaKnown RBP27.75■■■□□ 2.03
SNF8-202ENST00000502492 OS9Q13438 667 aaPredicted RBP27.75■■■□□ 2.03
SNF8-202ENST00000502492 SYAP1Q96A49 352 aaPredicted RBP27.75■■■□□ 2.03
SNF8-202ENST00000502492 NOL7Q9UMY1 257 aaKnown RBP27.75■■■□□ 2.03
SNF8-202ENST00000502492 ZBTB7CA1YPR0 619 aa27.75■■■□□ 2.03
SNF8-202ENST00000502492 AK2P54819 239 aa27.75■■■□□ 2.03
SNF8-202ENST00000502492 ARHGEF25Q86VW2 580 aa27.75■■■□□ 2.03
SNF8-202ENST00000502492 LIMCH1Q9UPQ0 1083 aa27.75■■■□□ 2.03
SNF8-202ENST00000502492 C1orf141Q5JVX7 400 aa27.74■■■□□ 2.03
SNF8-202ENST00000502492 TMEM87AQ8NBN3 555 aa27.74■■■□□ 2.03
SNF8-202ENST00000502492 HDAC5Q9UQL6 1122 aa27.74■■■□□ 2.03
SNF8-202ENST00000502492 RUFY3Q7L099 469 aa27.74■■■□□ 2.03
SNF8-202ENST00000502492 ECHDC1Q9NTX5 307 aa27.74■■■□□ 2.03
SNF8-202ENST00000502492 C9orf78Q9NZ63 289 aaPredicted RBP27.74■■■□□ 2.03
SNF8-202ENST00000502492 SPG7Q9UQ90 795 aa27.74■■■□□ 2.03
SNF8-202ENST00000502492 PROSER3Q2NL68 480 aa27.73■■■□□ 2.03
SNF8-202ENST00000502492 USP48Q86UV5 1035 aa27.73■■■□□ 2.03
SNF8-202ENST00000502492 RUFY2Q8WXA3 655 aa27.73■■■□□ 2.03
SNF8-202ENST00000502492 ERC1Q8IUD2 1116 aa27.73■■■□□ 2.03
SNF8-202ENST00000502492 DIAPH3Q9NSV4 1193 aa27.72■■■□□ 2.03
SNF8-202ENST00000502492 GADD45BO75293 160 aaPredicted RBP27.72■■■□□ 2.03
SNF8-202ENST00000502492 OFD1O75665 1012 aa27.71■■■□□ 2.03
SNF8-202ENST00000502492 KCNB2Q92953 911 aa27.71■■■□□ 2.03
SNF8-202ENST00000502492 PHLPP1O60346 1717 aa27.71■■■□□ 2.03
SNF8-202ENST00000502492 TSPY26PQ9H489 355 aa27.7■■■□□ 2.03
SNF8-202ENST00000502492 GDPD2Q9HCC8 539 aa27.7■■■□□ 2.03
SNF8-202ENST00000502492 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.7■■■□□ 2.03
SNF8-202ENST00000502492 COL16A1Q07092 1604 aaPredicted RBP27.7■■■□□ 2.03
SNF8-202ENST00000502492 GPATCH3Q96I76 525 aa27.7■■■□□ 2.02
SNF8-202ENST00000502492 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.7■■■□□ 2.02
SNF8-202ENST00000502492 ZSCAN22P10073 491 aaPredicted RBP27.69■■■□□ 2.02
SNF8-202ENST00000502492 HYPKQ9NX55 129 aa27.69■■■□□ 2.02
SNF8-202ENST00000502492 UTYO14607 1347 aa27.69■■■□□ 2.02
SNF8-202ENST00000502492 PHF14O94880 888 aa27.69■■■□□ 2.02
SNF8-202ENST00000502492 ZC3H6P61129 1189 aaKnown RBP27.69■■■□□ 2.02
SNF8-202ENST00000502492 CAMTA1Q9Y6Y1 1673 aa27.69■■■□□ 2.02
SNF8-202ENST00000502492 CWF19L2Q2TBE0 894 aaKnown RBP27.68■■■□□ 2.02
SNF8-202ENST00000502492 FOXD4L6Q3SYB3 417 aaPredicted RBP27.68■■■□□ 2.02
SNF8-202ENST00000502492 FOXD4L3Q6VB84 417 aaPredicted RBP27.68■■■□□ 2.02
SNF8-202ENST00000502492 PA2G4Q9UQ80 394 aaKnown RBP27.68■■■□□ 2.02
SNF8-202ENST00000502492 ZNF500O60304 480 aaPredicted RBP27.68■■■□□ 2.02
SNF8-202ENST00000502492 IFIT2P09913 472 aaKnown RBP27.68■■■□□ 2.02
SNF8-202ENST00000502492 CASTP20810 708 aaKnown RBP27.68■■■□□ 2.02
SNF8-202ENST00000502492 PTH1RQ03431 593 aa27.68■■■□□ 2.02
SNF8-202ENST00000502492 LINS1Q8NG48 757 aa27.68■■■□□ 2.02
SNF8-202ENST00000502492 ANKRD24Q8TF21 1146 aa27.68■■■□□ 2.02
SNF8-202ENST00000502492 TM6SF1Q9BZW5 370 aa27.68■■■□□ 2.02
SNF8-202ENST00000502492 SIPA1L3O60292 1781 aaPredicted RBP27.68■■■□□ 2.02
SNF8-202ENST00000502492 TCHHQ07283 1943 aa27.67■■■□□ 2.02
SNF8-202ENST00000502492 STX6O43752 255 aa27.67■■■□□ 2.02
SNF8-202ENST00000502492 EVI5LQ96CN4 794 aa27.67■■■□□ 2.02
SNF8-202ENST00000502492 SYT1P21579 422 aa27.67■■■□□ 2.02
SNF8-202ENST00000502492 PRAMEF22A3QJZ6 481 aa27.66■■■□□ 2.02
SNF8-202ENST00000502492 VPS53Q5VIR6 699 aa27.66■■■□□ 2.02
SNF8-202ENST00000502492 TPM2P07951 284 aa27.66■■■□□ 2.02
SNF8-202ENST00000502492 RNF214Q8ND24 703 aa27.66■■■□□ 2.02
SNF8-202ENST00000502492 KAZALD1Q96I82 304 aa27.66■■■□□ 2.02
SNF8-202ENST00000502492 ADAMTS7Q9UKP4 1686 aa27.65■■■□□ 2.02
SNF8-202ENST00000502492 GRM8O00222 908 aa27.65■■■□□ 2.02
SNF8-202ENST00000502492 MCM5P33992 734 aa27.65■■■□□ 2.02
SNF8-202ENST00000502492 ZSWIM6Q9HCJ5 1215 aa27.65■■■□□ 2.02
SNF8-202ENST00000502492 SMC3Q9UQE7 1217 aa27.65■■■□□ 2.02
SNF8-202ENST00000502492 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.64■■■□□ 2.02
SNF8-202ENST00000502492 LARP6Q9BRS8 491 aaKnown RBP27.64■■■□□ 2.02
SNF8-202ENST00000502492 ZKSCAN5Q9Y2L8 839 aa27.64■■■□□ 2.02
SNF8-202ENST00000502492 CPA1P15085 419 aa27.64■■■□□ 2.02
SNF8-202ENST00000502492 AACSQ86V21 672 aa27.64■■■□□ 2.02
SNF8-202ENST00000502492 DDX21Q9NR30 783 aaKnown RBP eCLIP27.64■■■□□ 2.02
SNF8-202ENST00000502492 CPDO75976 1380 aa27.64■■■□□ 2.01
SNF8-202ENST00000502492 NECTIN1Q15223 517 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms