RNA–Protein interactions for RNA: ENST00000502415.5

POLR2J3-206, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-206ENST00000502415 CCDC88AQ3V6T2 1871 aa20.75■□□□□ 0.91
POLR2J3-206ENST00000502415 HTATSF1O43719 755 aaKnown RBP20.75■□□□□ 0.91
POLR2J3-206ENST00000502415 JMYQ8N9B5 988 aa20.75■□□□□ 0.91
POLR2J3-206ENST00000502415 TPTE2Q6XPS3 522 aa20.74■□□□□ 0.91
POLR2J3-206ENST00000502415 USP16Q9Y5T5 823 aa20.74■□□□□ 0.91
POLR2J3-206ENST00000502415 LTBP3Q9NS15 1303 aa20.74■□□□□ 0.91
POLR2J3-206ENST00000502415 TIAM2Q8IVF5 1701 aa20.73■□□□□ 0.91
POLR2J3-206ENST00000502415 KCNQ3O43525 872 aa20.73■□□□□ 0.91
POLR2J3-206ENST00000502415 GTF2E1P29083 439 aaPredicted RBP20.73■□□□□ 0.91
POLR2J3-206ENST00000502415 SRGNP10124 158 aa20.72■□□□□ 0.91
POLR2J3-206ENST00000502415 PRPF40BQ6NWY9 871 aaKnown RBP20.72■□□□□ 0.91
POLR2J3-206ENST00000502415 MCM10Q7L590 875 aa20.72■□□□□ 0.91
POLR2J3-206ENST00000502415 RGL2O15211 777 aa20.71■□□□□ 0.91
POLR2J3-206ENST00000502415 PPP2R1AP30153 589 aa20.71■□□□□ 0.91
POLR2J3-206ENST00000502415 PRELPP51888 382 aa20.71■□□□□ 0.91
POLR2J3-206ENST00000502415 ANKRD31Q8N7Z5 1873 aa20.71■□□□□ 0.91
POLR2J3-206ENST00000502415 NPR1P16066 1061 aa20.7■□□□□ 0.9
POLR2J3-206ENST00000502415 TAF7Q15545 349 aaPredicted RBP20.7■□□□□ 0.9
POLR2J3-206ENST00000502415 CCDC93Q567U6 631 aa20.7■□□□□ 0.9
POLR2J3-206ENST00000502415 PNISRQ8TF01 805 aaKnown RBP20.7■□□□□ 0.9
POLR2J3-206ENST00000502415 NIP7Q9Y221 180 aaKnown RBP eCLIP20.7■□□□□ 0.9
POLR2J3-206ENST00000502415 IQCA1LA6NCM1 817 aa20.69■□□□□ 0.9
POLR2J3-206ENST00000502415 PIP4K2AP48426 406 aaPredicted RBP20.69■□□□□ 0.9
POLR2J3-206ENST00000502415 PNNQ9H307 717 aaKnown RBP20.69■□□□□ 0.9
POLR2J3-206ENST00000502415 FER1L6Q2WGJ9 1857 aa20.68■□□□□ 0.9
POLR2J3-206ENST00000502415 DICER1Q9UPY3 1922 aaKnown RBP20.67■□□□□ 0.9
POLR2J3-206ENST00000502415 ALDH1B1P30837 517 aa20.67■□□□□ 0.9
POLR2J3-206ENST00000502415 BCORQ6W2J9 1755 aa20.67■□□□□ 0.9
POLR2J3-206ENST00000502415 DCTN1Q14203 1278 aa20.66■□□□□ 0.9
POLR2J3-206ENST00000502415 CHADLQ6NUI6 762 aa20.66■□□□□ 0.9
POLR2J3-206ENST00000502415 RTKN2Q8IZC4 609 aa20.66■□□□□ 0.9
POLR2J3-206ENST00000502415 NYXQ9GZU5 481 aa20.66■□□□□ 0.9
POLR2J3-206ENST00000502415 COL11A2P13942 1736 aaPredicted RBP20.66■□□□□ 0.9
POLR2J3-206ENST00000502415 PRAMEF22A3QJZ6 481 aa20.65■□□□□ 0.9
POLR2J3-206ENST00000502415 FAM177BA6PVY3 158 aa20.65■□□□□ 0.9
POLR2J3-206ENST00000502415 DDNO94850 711 aaPredicted RBP20.64■□□□□ 0.89
POLR2J3-206ENST00000502415 FKBP4Q02790 459 aaKnown RBP eCLIP20.64■□□□□ 0.89
POLR2J3-206ENST00000502415 CACNA1SQ13698 1873 aa20.64■□□□□ 0.89
POLR2J3-206ENST00000502415 SLX4Q8IY92 1834 aa20.64■□□□□ 0.89
POLR2J3-206ENST00000502415 POTECB2RU33 542 aa20.63■□□□□ 0.89
POLR2J3-206ENST00000502415 KIF6Q6ZMV9 814 aa20.63■□□□□ 0.89
POLR2J3-206ENST00000502415 MAPK8IP3Q9UPT6 1336 aa20.62■□□□□ 0.89
POLR2J3-206ENST00000502415 TNS4Q8IZW8 715 aa20.62■□□□□ 0.89
POLR2J3-206ENST00000502415 CREBZFQ9NS37 354 aa20.62■□□□□ 0.89
POLR2J3-206ENST00000502415 ARFGEF2Q9Y6D5 1785 aa20.62■□□□□ 0.89
POLR2J3-206ENST00000502415 KLRG2A4D1S0 409 aaPredicted RBP20.61■□□□□ 0.89
POLR2J3-206ENST00000502415 NBPF26B4DH59 902 aa20.61■□□□□ 0.89
POLR2J3-206ENST00000502415 NBPF10Q6P3W6 841 aaKnown RBP20.61■□□□□ 0.89
POLR2J3-206ENST00000502415 NGEFQ8N5V2 710 aa20.61■□□□□ 0.89
POLR2J3-206ENST00000502415 NBPF15Q8N660 670 aa20.61■□□□□ 0.89
POLR2J3-206ENST00000502415 ERVV-1B6SEH8 477 aa20.6■□□□□ 0.89
POLR2J3-206ENST00000502415 HSPA1AP0DMV8 641 aaKnown RBP20.6■□□□□ 0.89
POLR2J3-206ENST00000502415 HSPA1BP0DMV9 641 aaKnown RBP20.6■□□□□ 0.89
POLR2J3-206ENST00000502415 COL13A1Q5TAT6 717 aaPredicted RBP20.6■□□□□ 0.89
POLR2J3-206ENST00000502415 LDHDQ86WU2 507 aa20.6■□□□□ 0.89
POLR2J3-206ENST00000502415 TMX4Q9H1E5 349 aaPredicted RBP20.6■□□□□ 0.89
POLR2J3-206ENST00000502415 MIS18AQ9NYP9 233 aa20.6■□□□□ 0.89
POLR2J3-206ENST00000502415 CC2D2BQ6DHV5 1058 aa20.59■□□□□ 0.89
POLR2J3-206ENST00000502415 C7orf43Q8WVR3 580 aa20.59■□□□□ 0.89
POLR2J3-206ENST00000502415 JDP2Q8WYK2 163 aa20.59■□□□□ 0.89
POLR2J3-206ENST00000502415 RPGRQ92834 1020 aaKnown RBP20.59■□□□□ 0.89
POLR2J3-206ENST00000502415 CLEC11AQ9Y240 323 aa20.59■□□□□ 0.89
POLR2J3-206ENST00000502415 RRP7AQ9Y3A4 280 aaKnown RBP20.59■□□□□ 0.89
POLR2J3-206ENST00000502415 GRIPAP1Q4V328 841 aa20.58■□□□□ 0.89
POLR2J3-206ENST00000502415 EAPPQ56P03 285 aaPredicted RBP20.58■□□□□ 0.89
POLR2J3-206ENST00000502415 L3MBTL3Q96JM7 780 aaPredicted RBP20.58■□□□□ 0.89
POLR2J3-206ENST00000502415 ZNF277Q9NRM2 450 aaPredicted RBP20.58■□□□□ 0.89
POLR2J3-206ENST00000502415 HACL1Q9UJ83 578 aa20.58■□□□□ 0.89
POLR2J3-206ENST00000502415 HLFQ16534 295 aa20.57■□□□□ 0.88
POLR2J3-206ENST00000502415 TAF1DQ9H5J8 278 aaPredicted RBP20.57■□□□□ 0.88
POLR2J3-206ENST00000502415 MAP3K15Q6ZN16 1313 aa20.56■□□□□ 0.88
POLR2J3-206ENST00000502415 IARSP41252 1262 aaKnown RBP20.56■□□□□ 0.88
POLR2J3-206ENST00000502415 NFE2L2Q16236 605 aa20.56■□□□□ 0.88
POLR2J3-206ENST00000502415 PNMA8AQ86V59 439 aaPredicted RBP20.56■□□□□ 0.88
POLR2J3-206ENST00000502415 SYNE4Q8N205 404 aa20.56■□□□□ 0.88
POLR2J3-206ENST00000502415 SCN4AP35499 1836 aa20.55■□□□□ 0.88
POLR2J3-206ENST00000502415 MYL6BP14649 208 aa20.55■□□□□ 0.88
POLR2J3-206ENST00000502415 EIF6P56537 245 aaKnown RBP20.55■□□□□ 0.88
POLR2J3-206ENST00000502415 MKRN1Q9UHC7 482 aaKnown RBP20.55■□□□□ 0.88
POLR2J3-206ENST00000502415 LAMB4A4D0S4 1761 aa20.54■□□□□ 0.88
POLR2J3-206ENST00000502415 CAPN15O75808 1086 aa20.54■□□□□ 0.88
POLR2J3-206ENST00000502415 EIF4A1P60842 406 aaKnown RBP20.54■□□□□ 0.88
POLR2J3-206ENST00000502415 PPP1R42Q7Z4L9 355 aa20.54■□□□□ 0.88
POLR2J3-206ENST00000502415 RBM17Q96I25 401 aaKnown RBP20.54■□□□□ 0.88
POLR2J3-206ENST00000502415 PSMD1Q99460 953 aa20.54■□□□□ 0.88
POLR2J3-206ENST00000502415 ERBB4Q15303 1308 aa20.53■□□□□ 0.88
POLR2J3-206ENST00000502415 LMOD1P29536 600 aaPredicted RBP20.53■□□□□ 0.88
POLR2J3-206ENST00000502415 EPHX2P34913 555 aa20.53■□□□□ 0.88
POLR2J3-206ENST00000502415 AIDAQ96BJ3 306 aa20.53■□□□□ 0.88
POLR2J3-206ENST00000502415 TMEM88BA6NKF7 163 aa20.52■□□□□ 0.88
POLR2J3-206ENST00000502415 POTEIP0CG38 1075 aa20.52■□□□□ 0.88
POLR2J3-206ENST00000502415 POTEJP0CG39 1038 aa20.52■□□□□ 0.88
POLR2J3-206ENST00000502415 NUTM1Q86Y26 1132 aa20.52■□□□□ 0.88
POLR2J3-206ENST00000502415 GPC2Q8N158 579 aa20.52■□□□□ 0.88
POLR2J3-206ENST00000502415 ZBTB3Q9H5J0 574 aa20.52■□□□□ 0.88
POLR2J3-206ENST00000502415 IBTKQ9P2D0 1353 aaPredicted RBP20.51■□□□□ 0.87
POLR2J3-206ENST00000502415 GPTP24298 496 aa20.51■□□□□ 0.87
POLR2J3-206ENST00000502415 CRY2Q49AN0 593 aa20.51■□□□□ 0.87
POLR2J3-206ENST00000502415 PARP10Q53GL7 1025 aa20.51■□□□□ 0.87
POLR2J3-206ENST00000502415 TSPYL4Q9UJ04 414 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms