RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 SMTNP53814 917 aa5.98□□□□□ -1.45
HMGB1P21-201ENST00000502313 FOXC1Q12948 553 aa5.98□□□□□ -1.45
HMGB1P21-201ENST00000502313 NNTQ13423 1086 aa5.98□□□□□ -1.45
HMGB1P21-201ENST00000502313 ECM1Q16610 540 aa5.98□□□□□ -1.45
HMGB1P21-201ENST00000502313 TBCELQ5QJ74 424 aa5.98□□□□□ -1.45
HMGB1P21-201ENST00000502313 LIAT1Q6ZQX7 453 aa5.98□□□□□ -1.45
HMGB1P21-201ENST00000502313 NT5DC4Q86YG4 428 aa5.98□□□□□ -1.45
HMGB1P21-201ENST00000502313 TTC16Q8NEE8 873 aa5.98□□□□□ -1.45
HMGB1P21-201ENST00000502313 NGLY1Q96IV0 654 aa5.98□□□□□ -1.45
HMGB1P21-201ENST00000502313 CAPN10Q9HC96 672 aa5.98□□□□□ -1.45
HMGB1P21-201ENST00000502313 SCHIP1Q9P0W5 487 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P21-201ENST00000502313 KLHL42Q9P2K6 505 aa5.98□□□□□ -1.45
HMGB1P21-201ENST00000502313 SERTM1A2A2V5 107 aa5.97□□□□□ -1.45
HMGB1P21-201ENST00000502313 TTC24A2A3L6 582 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P21-201ENST00000502313 MPSTP25325 297 aa5.97□□□□□ -1.45
HMGB1P21-201ENST00000502313 IGBP1P78318 339 aa5.97□□□□□ -1.45
HMGB1P21-201ENST00000502313 FGD1P98174 961 aa5.97□□□□□ -1.45
HMGB1P21-201ENST00000502313 PTPROQ16827 1216 aa5.97□□□□□ -1.45
HMGB1P21-201ENST00000502313 ZNF697Q5TEC3 545 aa5.97□□□□□ -1.45
HMGB1P21-201ENST00000502313 METTL16Q86W50 562 aaKnown RBP5.97□□□□□ -1.45
HMGB1P21-201ENST00000502313 CNKSR1Q969H4 720 aa5.97□□□□□ -1.45
HMGB1P21-201ENST00000502313 SLC4A9Q96Q91 983 aa5.97□□□□□ -1.45
HMGB1P21-201ENST00000502313 PURBQ96QR8 312 aaKnown RBP5.97□□□□□ -1.45
HMGB1P21-201ENST00000502313 CABP1Q9NZU7 370 aa5.97□□□□□ -1.45
HMGB1P21-201ENST00000502313 TBX22Q9Y458 520 aa5.97□□□□□ -1.45
HMGB1P21-201ENST00000502313 TOPBP1Q92547 1522 aa5.97□□□□□ -1.45
HMGB1P21-201ENST00000502313 LILRA1O75019 489 aa5.96□□□□□ -1.46
HMGB1P21-201ENST00000502313 NR3C2P08235 984 aa5.96□□□□□ -1.46
HMGB1P21-201ENST00000502313 PCSK2P16519 638 aa5.96□□□□□ -1.46
HMGB1P21-201ENST00000502313 TCEAL1Q15170 157 aa5.96□□□□□ -1.46
HMGB1P21-201ENST00000502313 TMEM214Q6NUQ4 689 aaKnown RBP5.96□□□□□ -1.46
HMGB1P21-201ENST00000502313 RGL4Q8IZJ4 473 aa5.96□□□□□ -1.46
HMGB1P21-201ENST00000502313 NLGN1Q8N2Q7 840 aa5.96□□□□□ -1.46
HMGB1P21-201ENST00000502313 STAG2Q8N3U4 1231 aa5.96□□□□□ -1.46
HMGB1P21-201ENST00000502313 TMEM87AQ8NBN3 555 aa5.96□□□□□ -1.46
HMGB1P21-201ENST00000502313 ESYT1Q9BSJ8 1104 aa5.96□□□□□ -1.46
HMGB1P21-201ENST00000502313 MYH16Q9H6N6 1097 aa5.96□□□□□ -1.46
HMGB1P21-201ENST00000502313 hCG_2014768A0A024R1R8 64 aa5.95□□□□□ -1.46
HMGB1P21-201ENST00000502313 SIAH2O43255 324 aa5.95□□□□□ -1.46
HMGB1P21-201ENST00000502313 MAP4K4O95819 1239 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P21-201ENST00000502313 TNNI2P48788 182 aa5.95□□□□□ -1.46
HMGB1P21-201ENST00000502313 EPHA4P54764 986 aa5.95□□□□□ -1.46
HMGB1P21-201ENST00000502313 ATP2B2Q01814 1243 aa5.95□□□□□ -1.46
HMGB1P21-201ENST00000502313 CLN3Q13286 438 aa5.95□□□□□ -1.46
HMGB1P21-201ENST00000502313 PDE3BQ13370 1112 aa5.95□□□□□ -1.46
HMGB1P21-201ENST00000502313 GNASQ5JWF2 1037 aa5.95□□□□□ -1.46
HMGB1P21-201ENST00000502313 CAPN12Q6ZSI9 719 aa5.95□□□□□ -1.46
HMGB1P21-201ENST00000502313 CYP4X1Q8N118 509 aa5.95□□□□□ -1.46
HMGB1P21-201ENST00000502313 SLC43A3Q8NBI5 491 aa5.95□□□□□ -1.46
HMGB1P21-201ENST00000502313 FAM161BQ96MY7 647 aa5.95□□□□□ -1.46
HMGB1P21-201ENST00000502313 ACBD3Q9H3P7 528 aa5.95□□□□□ -1.46
HMGB1P21-201ENST00000502313 ZSWIM4Q9H7M6 989 aa5.95□□□□□ -1.46
HMGB1P21-201ENST00000502313 STIM2Q9P246 746 aa5.95□□□□□ -1.46
HMGB1P21-201ENST00000502313 BCCIPQ9P287 314 aaKnown RBP eCLIP5.95□□□□□ -1.46
HMGB1P21-201ENST00000502313 TARBP1Q13395 1621 aaKnown RBP5.95□□□□□ -1.46
HMGB1P21-201ENST00000502313 ABCC8Q09428 1581 aa5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 DNMBPQ6XZF7 1577 aa5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 A0A1W2PRU2 124 aa5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 CDK2AP1O14519 115 aa5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 UPP2O95045 317 aa5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 ZIC2O95409 532 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 PARNO95453 639 aaKnown RBP5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 P4HBP07237 508 aaKnown RBP5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 WDR4P57081 412 aaKnown RBP5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 ARHGAP4P98171 946 aa5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 RELBQ01201 579 aa5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 SLC27A3Q5K4L6 730 aa5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 SPRYD7Q5W111 196 aa5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 EXOC8Q8IYI6 725 aa5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 SNIP1Q8TAD8 396 aaKnown RBP5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 XAGE2Q96GT9 111 aa5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 CITED4Q96RK1 184 aa5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 ZSCAN10Q96SZ4 725 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 C2orf49Q9BVC5 232 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 NIFKQ9BYG3 293 aaKnown RBP5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 METTL14Q9HCE5 456 aaKnown RBP5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 RNF19AQ9NV58 838 aa5.94□□□□□ -1.46
HMGB1P21-201ENST00000502313 IL2RAP01589 272 aa5.93□□□□□ -1.46
HMGB1P21-201ENST00000502313 DNAJA1P31689 397 aaKnown RBP5.93□□□□□ -1.46
HMGB1P21-201ENST00000502313 PTGIRP43119 386 aa5.93□□□□□ -1.46
HMGB1P21-201ENST00000502313 EIF1AXP47813 144 aaKnown RBP5.93□□□□□ -1.46
HMGB1P21-201ENST00000502313 FOXK2Q01167 660 aa5.93□□□□□ -1.46
HMGB1P21-201ENST00000502313 COL19A1Q14993 1142 aa5.93□□□□□ -1.46
HMGB1P21-201ENST00000502313 MTFR1Q15390 333 aa5.93□□□□□ -1.46
HMGB1P21-201ENST00000502313 HIF1AQ16665 826 aa5.93□□□□□ -1.46
HMGB1P21-201ENST00000502313 NBPF1Q3BBV0 1214 aa5.93□□□□□ -1.46
HMGB1P21-201ENST00000502313 IFFO2Q5TF58 517 aa5.93□□□□□ -1.46
HMGB1P21-201ENST00000502313 ZNF598Q86UK7 904 aaKnown RBP5.93□□□□□ -1.46
HMGB1P21-201ENST00000502313 KCNB2Q92953 911 aa5.93□□□□□ -1.46
HMGB1P21-201ENST00000502313 DMRTB1Q96MA1 342 aa5.93□□□□□ -1.46
HMGB1P21-201ENST00000502313 RBCK1Q9BYM8 510 aa5.93□□□□□ -1.46
HMGB1P21-201ENST00000502313 MRS2Q9HD23 443 aa5.93□□□□□ -1.46
HMGB1P21-201ENST00000502313 POLA1P09884 1462 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P21-201ENST00000502313 IFT140Q96RY7 1462 aa5.93□□□□□ -1.46
HMGB1P21-201ENST00000502313 CUX1P39880 1505 aa5.93□□□□□ -1.46
HMGB1P21-201ENST00000502313 ZNF608Q9ULD9 1512 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P21-201ENST00000502313 PEX14O75381 377 aa5.92□□□□□ -1.46
HMGB1P21-201ENST00000502313 ADD1P35611 737 aaKnown RBP5.92□□□□□ -1.46
HMGB1P21-201ENST00000502313 USP5P45974 858 aa5.92□□□□□ -1.46
HMGB1P21-201ENST00000502313 MAPK8P45983 427 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms