RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 PI4KAP2A4QPH2 592 aa24.89■■□□□ 1.57
LINC01550-201ENST00000499006 KSR2Q6VAB6 950 aa24.89■■□□□ 1.57
LINC01550-201ENST00000499006 NPM2Q86SE8 214 aaKnown RBP24.89■■□□□ 1.57
LINC01550-201ENST00000499006 DZIP3Q86Y13 1208 aaKnown RBP24.89■■□□□ 1.57
LINC01550-201ENST00000499006 PI4KAP1Q8N8J0 262 aa24.89■■□□□ 1.57
LINC01550-201ENST00000499006 PLBD2Q8NHP8 589 aa24.89■■□□□ 1.57
LINC01550-201ENST00000499006 API5Q9BZZ5 524 aaKnown RBP24.89■■□□□ 1.57
LINC01550-201ENST00000499006 TNNQ9UQP3 1299 aa24.89■■□□□ 1.57
LINC01550-201ENST00000499006 AFDNP55196 1824 aaKnown RBP24.88■■□□□ 1.57
LINC01550-201ENST00000499006 MAP3K15Q6ZN16 1313 aa24.88■■□□□ 1.57
LINC01550-201ENST00000499006 A0A087WZG4 1122 aa24.88■■□□□ 1.57
LINC01550-201ENST00000499006 ARHGEF1Q92888 912 aaKnown RBP24.88■■□□□ 1.57
LINC01550-201ENST00000499006 TBC1D2BQ9UPU7 963 aa24.88■■□□□ 1.57
LINC01550-201ENST00000499006 ABCC4O15439 1325 aa24.87■■□□□ 1.57
LINC01550-201ENST00000499006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.87■■□□□ 1.57
LINC01550-201ENST00000499006 SLC15A2Q16348 729 aa24.87■■□□□ 1.57
LINC01550-201ENST00000499006 TRAPPC3LQ5T215 181 aa24.87■■□□□ 1.57
LINC01550-201ENST00000499006 KIF6Q6ZMV9 814 aa24.87■■□□□ 1.57
LINC01550-201ENST00000499006 TFCP2L1Q9NZI6 479 aa24.87■■□□□ 1.57
LINC01550-201ENST00000499006 PXDNLA1KZ92 1463 aa24.87■■□□□ 1.57
LINC01550-201ENST00000499006 F6X3S4 739 aa24.86■■□□□ 1.57
LINC01550-201ENST00000499006 MAP3K2Q9Y2U5 619 aa24.86■■□□□ 1.57
LINC01550-201ENST00000499006 ERVV-1B6SEH8 477 aa24.85■■□□□ 1.57
LINC01550-201ENST00000499006 PHF14O94880 888 aa24.85■■□□□ 1.57
LINC01550-201ENST00000499006 CAMTA2O94983 1202 aa24.85■■□□□ 1.57
LINC01550-201ENST00000499006 RIC3Q7Z5B4 369 aa24.85■■□□□ 1.57
LINC01550-201ENST00000499006 STK32BQ9NY57 414 aa24.85■■□□□ 1.57
LINC01550-201ENST00000499006 PDE3AQ14432 1141 aa24.84■■□□□ 1.57
LINC01550-201ENST00000499006 DNAAF4Q8WXU2 420 aa24.84■■□□□ 1.57
LINC01550-201ENST00000499006 ZBTB3Q9H5J0 574 aa24.84■■□□□ 1.57
LINC01550-201ENST00000499006 NARFQ9UHQ1 456 aa24.84■■□□□ 1.57
LINC01550-201ENST00000499006 RLBP1P12271 317 aa24.83■■□□□ 1.57
LINC01550-201ENST00000499006 C20orf194Q5TEA3 1177 aa24.83■■□□□ 1.57
LINC01550-201ENST00000499006 DZIP1LQ8IYY4 767 aaKnown RBP24.83■■□□□ 1.57
LINC01550-201ENST00000499006 CLUAP1Q96AJ1 413 aa24.83■■□□□ 1.57
LINC01550-201ENST00000499006 ARXQ96QS3 562 aa24.83■■□□□ 1.57
LINC01550-201ENST00000499006 PNPLA7Q6ZV29 1317 aa24.83■■□□□ 1.57
LINC01550-201ENST00000499006 MS4A1P11836 297 aa24.83■■□□□ 1.56
LINC01550-201ENST00000499006 FLAD1Q8NFF5 587 aa24.83■■□□□ 1.56
LINC01550-201ENST00000499006 USP42Q9H9J4 1324 aaKnown RBP24.82■■□□□ 1.56
LINC01550-201ENST00000499006 ATP10DQ9P241 1426 aa24.82■■□□□ 1.56
LINC01550-201ENST00000499006 RGL2O15211 777 aa24.82■■□□□ 1.56
LINC01550-201ENST00000499006 RFC4P35249 363 aa24.82■■□□□ 1.56
LINC01550-201ENST00000499006 HLFQ16534 295 aa24.82■■□□□ 1.56
LINC01550-201ENST00000499006 GIGYF2Q6Y7W6 1299 aaKnown RBP24.82■■□□□ 1.56
LINC01550-201ENST00000499006 METTL22Q9BUU2 404 aaPredicted RBP24.82■■□□□ 1.56
LINC01550-201ENST00000499006 COL23A1Q86Y22 540 aaPredicted RBP24.81■■□□□ 1.56
LINC01550-201ENST00000499006 PANK1Q8TE04 598 aa24.81■■□□□ 1.56
LINC01550-201ENST00000499006 INTS3Q68E01 1043 aaKnown RBP24.8■■□□□ 1.56
LINC01550-201ENST00000499006 FTSJ3Q8IY81 847 aaKnown RBP24.8■■□□□ 1.56
LINC01550-201ENST00000499006 SRP68Q9UHB9 627 aaKnown RBP24.8■■□□□ 1.56
LINC01550-201ENST00000499006 ZPR1O75312 459 aa24.79■■□□□ 1.56
LINC01550-201ENST00000499006 BEND3Q5T5X7 828 aa24.79■■□□□ 1.56
LINC01550-201ENST00000499006 USPL1Q5W0Q7 1092 aa24.79■■□□□ 1.56
LINC01550-201ENST00000499006 SLC4A10Q6U841 1118 aa24.79■■□□□ 1.56
LINC01550-201ENST00000499006 CLEC4GQ6UXB4 293 aa24.79■■□□□ 1.56
LINC01550-201ENST00000499006 BCL2L12Q9HB09 334 aa24.79■■□□□ 1.56
LINC01550-201ENST00000499006 TCIRG1Q13488 830 aa24.78■■□□□ 1.56
LINC01550-201ENST00000499006 TMEM57Q8N5G2 664 aa24.78■■□□□ 1.56
LINC01550-201ENST00000499006 CASZ1Q86V15 1759 aa24.77■■□□□ 1.56
LINC01550-201ENST00000499006 MYD88Q99836 296 aa24.77■■□□□ 1.56
LINC01550-201ENST00000499006 COL24A1Q17RW2 1714 aa24.77■■□□□ 1.56
LINC01550-201ENST00000499006 IGKV5-2P06315 115 aa24.77■■□□□ 1.56
LINC01550-201ENST00000499006 CCT4P50991 539 aaKnown RBP24.77■■□□□ 1.56
LINC01550-201ENST00000499006 IBTKQ9P2D0 1353 aaPredicted RBP24.76■■□□□ 1.55
LINC01550-201ENST00000499006 NEXNQ0ZGT2 675 aa24.76■■□□□ 1.55
LINC01550-201ENST00000499006 HSP90AB3PQ58FF7 597 aa24.76■■□□□ 1.55
LINC01550-201ENST00000499006 LINS1Q8NG48 757 aa24.76■■□□□ 1.55
LINC01550-201ENST00000499006 ISCA1Q9BUE6 129 aa24.76■■□□□ 1.55
LINC01550-201ENST00000499006 ZNF652Q9Y2D9 606 aa24.76■■□□□ 1.55
LINC01550-201ENST00000499006 GYS1P13807 737 aa24.75■■□□□ 1.55
LINC01550-201ENST00000499006 ZNF34Q8IZ26 560 aa24.75■■□□□ 1.55
LINC01550-201ENST00000499006 TRIM28Q13263 835 aaKnown RBP24.74■■□□□ 1.55
LINC01550-201ENST00000499006 SRCIN1Q9C0H9 1055 aa24.74■■□□□ 1.55
LINC01550-201ENST00000499006 NEURL1BA8MQ27 555 aa24.73■■□□□ 1.55
LINC01550-201ENST00000499006 ATP5J2-PTCD1G3V325 749 aa24.73■■□□□ 1.55
LINC01550-201ENST00000499006 ALDH1L1O75891 902 aa24.73■■□□□ 1.55
LINC01550-201ENST00000499006 MVPQ14764 893 aaKnown RBP24.73■■□□□ 1.55
LINC01550-201ENST00000499006 CWF19L2Q2TBE0 894 aaKnown RBP24.73■■□□□ 1.55
LINC01550-201ENST00000499006 COG6Q9Y2V7 657 aa24.73■■□□□ 1.55
LINC01550-201ENST00000499006 FKBP8Q14318 412 aa24.71■■□□□ 1.55
LINC01550-201ENST00000499006 TBC1D9BQ66K14 1250 aa24.71■■□□□ 1.55
LINC01550-201ENST00000499006 ITPRIPQ8IWB1 547 aa24.71■■□□□ 1.55
LINC01550-201ENST00000499006 UBN2Q6ZU65 1347 aa24.71■■□□□ 1.55
LINC01550-201ENST00000499006 MSH5O43196 834 aa24.7■■□□□ 1.55
LINC01550-201ENST00000499006 CCDC191Q8NCU4 936 aa24.7■■□□□ 1.55
LINC01550-201ENST00000499006 PDGFDQ9GZP0 370 aaPredicted RBP24.7■■□□□ 1.55
LINC01550-201ENST00000499006 IRX6P78412 446 aaPredicted RBP24.7■■□□□ 1.54
LINC01550-201ENST00000499006 GCKRQ14397 625 aa24.7■■□□□ 1.54
LINC01550-201ENST00000499006 CRBNQ96SW2 442 aa24.7■■□□□ 1.54
LINC01550-201ENST00000499006 GPTP24298 496 aa24.69■■□□□ 1.54
LINC01550-201ENST00000499006 NLRP10Q86W26 655 aa24.69■■□□□ 1.54
LINC01550-201ENST00000499006 NIP7Q9Y221 180 aaKnown RBP eCLIP24.69■■□□□ 1.54
LINC01550-201ENST00000499006 CWC25Q9NXE8 425 aaPredicted RBP24.68■■□□□ 1.54
LINC01550-201ENST00000499006 DDX19BQ9UMR2 479 aa24.68■■□□□ 1.54
LINC01550-201ENST00000499006 ZBTB7BO15156 539 aaPredicted RBP24.67■■□□□ 1.54
LINC01550-201ENST00000499006 TM4SF1P30408 202 aa24.67■■□□□ 1.54
LINC01550-201ENST00000499006 R3HDM1Q15032 1099 aaKnown RBP24.67■■□□□ 1.54
LINC01550-201ENST00000499006 USP44Q9H0E7 712 aa24.67■■□□□ 1.54
LINC01550-201ENST00000499006 NRXN2Q9P2S2 1712 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms