RNA–Protein interactions for RNA: ENST00000498756.5

GPATCH4-210, Transcript of G-patch domain containing 4, human

TSL 2

Gene GPATCH4, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPATCH4-210	ENST00000498756	ZBTB3	Q9H5J0	574 aa		13.81	□□□□□ -0.2
GPATCH4-210	ENST00000498756	RNF123	Q5XPI4	1314 aa		13.81	□□□□□ -0.2
GPATCH4-210	ENST00000498756	PNPLA7	Q6ZV29	1317 aa		13.81	□□□□□ -0.2
GPATCH4-210	ENST00000498756	ADCY9	O60503	1353 aa		13.81	□□□□□ -0.2
GPATCH4-210	ENST00000498756	CAMTA2	O94983	1202 aa		13.8	□□□□□ -0.2
GPATCH4-210	ENST00000498756	CENPB	P07199	599 aa	Predicted RBP	13.8	□□□□□ -0.2
GPATCH4-210	ENST00000498756	RLBP1	P12271	317 aa		13.8	□□□□□ -0.2
GPATCH4-210	ENST00000498756	TRIM27	P14373	513 aa		13.8	□□□□□ -0.2
GPATCH4-210	ENST00000498756	HMGB2	P26583	209 aa	Known RBP	13.8	□□□□□ -0.2
GPATCH4-210	ENST00000498756	TRAPPC3L	Q5T215	181 aa		13.8	□□□□□ -0.2
GPATCH4-210	ENST00000498756	ANKRD13D	Q6ZTN6	518 aa		13.8	□□□□□ -0.2
GPATCH4-210	ENST00000498756	DZIP3	Q86Y13	1208 aa	Known RBP	13.8	□□□□□ -0.2
GPATCH4-210	ENST00000498756	CLUAP1	Q96AJ1	413 aa		13.8	□□□□□ -0.2
GPATCH4-210	ENST00000498756	CHMP4A	Q9BY43	222 aa		13.8	□□□□□ -0.2
GPATCH4-210	ENST00000498756	COL15A1	P39059	1388 aa		13.8	□□□□□ -0.2
GPATCH4-210	ENST00000498756	RRP1	P56182	461 aa	Known RBP	13.79	□□□□□ -0.2
GPATCH4-210	ENST00000498756	FKBP5	Q13451	457 aa	Predicted RBP	13.79	□□□□□ -0.2
GPATCH4-210	ENST00000498756	KSR2	Q6VAB6	950 aa		13.79	□□□□□ -0.2
GPATCH4-210	ENST00000498756	SLC16A10	Q8TF71	515 aa		13.79	□□□□□ -0.2
GPATCH4-210	ENST00000498756	MAP3K2	Q9Y2U5	619 aa		13.79	□□□□□ -0.2
GPATCH4-210	ENST00000498756	UBR3	Q6ZT12	1888 aa		13.78	□□□□□ -0.2
GPATCH4-210	ENST00000498756	SSFA2	P28290	1259 aa		13.78	□□□□□ -0.2
GPATCH4-210	ENST00000498756	USPL1	Q5W0Q7	1092 aa		13.78	□□□□□ -0.2
GPATCH4-210	ENST00000498756	ZKSCAN2	Q63HK3	967 aa		13.78	□□□□□ -0.2
GPATCH4-210	ENST00000498756	ATF7IP	Q6VMQ6	1270 aa		13.78	□□□□□ -0.2
GPATCH4-210	ENST00000498756	PLBD2	Q8NHP8	589 aa		13.78	□□□□□ -0.2
GPATCH4-210	ENST00000498756	PANK1	Q8TE04	598 aa		13.78	□□□□□ -0.2
GPATCH4-210	ENST00000498756	NARF	Q9UHQ1	456 aa		13.78	□□□□□ -0.2
GPATCH4-210	ENST00000498756	MAP3K15	Q6ZN16	1313 aa		13.78	□□□□□ -0.2
GPATCH4-210	ENST00000498756	TUBGCP6	Q96RT7	1819 aa		13.78	□□□□□ -0.2
GPATCH4-210	ENST00000498756	QSER1	Q2KHR3	1735 aa		13.77	□□□□□ -0.21
GPATCH4-210	ENST00000498756	RIC3	Q7Z5B4	369 aa		13.77	□□□□□ -0.21
GPATCH4-210	ENST00000498756	ARHGAP45	Q92619	1136 aa		13.77	□□□□□ -0.21
GPATCH4-210	ENST00000498756	SGIP1	Q9BQI5	828 aa		13.77	□□□□□ -0.21
GPATCH4-210	ENST00000498756	PTPRC	P08575	1304 aa		13.76	□□□□□ -0.21
GPATCH4-210	ENST00000498756	KIF16B	Q96L93	1317 aa		13.76	□□□□□ -0.21
GPATCH4-210	ENST00000498756		A0A087WZG4	1122 aa		13.76	□□□□□ -0.21
GPATCH4-210	ENST00000498756	ATP5J2-PTCD1	G3V325	749 aa		13.76	□□□□□ -0.21
GPATCH4-210	ENST00000498756	IGKV5-2	P06315	115 aa		13.76	□□□□□ -0.21
GPATCH4-210	ENST00000498756	GYS1	P13807	737 aa		13.76	□□□□□ -0.21
GPATCH4-210	ENST00000498756	RFC4	P35249	363 aa		13.76	□□□□□ -0.21
GPATCH4-210	ENST00000498756	IRX6	P78412	446 aa	Predicted RBP	13.76	□□□□□ -0.21
GPATCH4-210	ENST00000498756	FKBP8	Q14318	412 aa		13.76	□□□□□ -0.21
GPATCH4-210	ENST00000498756	DNAAF4	Q8WXU2	420 aa		13.76	□□□□□ -0.21
GPATCH4-210	ENST00000498756	MYD88	Q99836	296 aa		13.76	□□□□□ -0.21
GPATCH4-210	ENST00000498756	METTL22	Q9BUU2	404 aa	Predicted RBP	13.76	□□□□□ -0.21
GPATCH4-210	ENST00000498756	USP42	Q9H9J4	1324 aa	Known RBP	13.75	□□□□□ -0.21
GPATCH4-210	ENST00000498756	ERVV-1	B6SEH8	477 aa		13.75	□□□□□ -0.21
GPATCH4-210	ENST00000498756	IPO8	O15397	1037 aa	Known RBP	13.75	□□□□□ -0.21
GPATCH4-210	ENST00000498756	ADRA2B	P18089	450 aa		13.75	□□□□□ -0.21
GPATCH4-210	ENST00000498756	CWF19L2	Q2TBE0	894 aa	Known RBP	13.75	□□□□□ -0.21
GPATCH4-210	ENST00000498756	BEND3	Q5T5X7	828 aa		13.75	□□□□□ -0.21
GPATCH4-210	ENST00000498756	SLC4A10	Q6U841	1118 aa		13.75	□□□□□ -0.21
GPATCH4-210	ENST00000498756	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.75	□□□□□ -0.21
GPATCH4-210	ENST00000498756	KIF6	Q6ZMV9	814 aa		13.75	□□□□□ -0.21
GPATCH4-210	ENST00000498756	TMEM57	Q8N5G2	664 aa		13.75	□□□□□ -0.21
GPATCH4-210	ENST00000498756	FLAD1	Q8NFF5	587 aa		13.75	□□□□□ -0.21
GPATCH4-210	ENST00000498756	API5	Q9BZZ5	524 aa	Known RBP	13.75	□□□□□ -0.21
GPATCH4-210	ENST00000498756	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.75	□□□□□ -0.21
GPATCH4-210	ENST00000498756	ABCC4	O15439	1325 aa		13.74	□□□□□ -0.21
GPATCH4-210	ENST00000498756	DCAF8L1	A6NGE4	600 aa		13.74	□□□□□ -0.21
GPATCH4-210	ENST00000498756	DDX58	O95786	925 aa	Known RBP	13.74	□□□□□ -0.21
GPATCH4-210	ENST00000498756	GPT	P24298	496 aa		13.74	□□□□□ -0.21
GPATCH4-210	ENST00000498756	POLD1	P28340	1107 aa		13.74	□□□□□ -0.21
GPATCH4-210	ENST00000498756	TCIRG1	Q13488	830 aa		13.74	□□□□□ -0.21
GPATCH4-210	ENST00000498756	TBC1D9B	Q66K14	1250 aa		13.74	□□□□□ -0.21
GPATCH4-210	ENST00000498756	ZNF34	Q8IZ26	560 aa		13.74	□□□□□ -0.21
GPATCH4-210	ENST00000498756	JARID2	Q92833	1246 aa	Predicted RBP	13.74	□□□□□ -0.21
GPATCH4-210	ENST00000498756	SYT17	Q9BSW7	474 aa		13.74	□□□□□ -0.21
GPATCH4-210	ENST00000498756	ISCA1	Q9BUE6	129 aa		13.74	□□□□□ -0.21
GPATCH4-210	ENST00000498756	ZPR1	O75312	459 aa		13.73	□□□□□ -0.21
GPATCH4-210	ENST00000498756	BICDL1	Q6ZP65	573 aa		13.73	□□□□□ -0.21
GPATCH4-210	ENST00000498756	NPM2	Q86SE8	214 aa	Known RBP	13.73	□□□□□ -0.21
GPATCH4-210	ENST00000498756	DZIP1L	Q8IYY4	767 aa	Known RBP	13.73	□□□□□ -0.21
GPATCH4-210	ENST00000498756	COG6	Q9Y2V7	657 aa		13.73	□□□□□ -0.21
GPATCH4-210	ENST00000498756	CACNA1F	O60840	1977 aa		13.72	□□□□□ -0.21
GPATCH4-210	ENST00000498756	UBN2	Q6ZU65	1347 aa		13.72	□□□□□ -0.21
GPATCH4-210	ENST00000498756	MSL1	Q68DK7	614 aa		13.72	□□□□□ -0.21
GPATCH4-210	ENST00000498756	INTS3	Q68E01	1043 aa	Known RBP	13.72	□□□□□ -0.21
GPATCH4-210	ENST00000498756	SYNE4	Q8N205	404 aa		13.72	□□□□□ -0.21
GPATCH4-210	ENST00000498756	C4A	P0C0L4	1744 aa		13.72	□□□□□ -0.21
GPATCH4-210	ENST00000498756	NEURL1B	A8MQ27	555 aa		13.71	□□□□□ -0.21
GPATCH4-210	ENST00000498756	TM4SF1	P30408	202 aa		13.71	□□□□□ -0.21
GPATCH4-210	ENST00000498756	NFIX	Q14938	502 aa		13.71	□□□□□ -0.21
GPATCH4-210	ENST00000498756	SUSD4	Q5VX71	490 aa		13.71	□□□□□ -0.21
GPATCH4-210	ENST00000498756	NLRP10	Q86W26	655 aa		13.71	□□□□□ -0.21
GPATCH4-210	ENST00000498756	KLHL34	Q8N239	644 aa		13.71	□□□□□ -0.21
GPATCH4-210	ENST00000498756	CRBN	Q96SW2	442 aa		13.71	□□□□□ -0.21
GPATCH4-210	ENST00000498756	FAM177B	A6PVY3	158 aa		13.7	□□□□□ -0.22
GPATCH4-210	ENST00000498756	DDR1	Q08345	913 aa		13.7	□□□□□ -0.22
GPATCH4-210	ENST00000498756	PDE3A	Q14432	1141 aa		13.7	□□□□□ -0.22
GPATCH4-210	ENST00000498756	CLEC4G	Q6UXB4	293 aa		13.7	□□□□□ -0.22
GPATCH4-210	ENST00000498756	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.7	□□□□□ -0.22
GPATCH4-210	ENST00000498756	LINS1	Q8NG48	757 aa		13.7	□□□□□ -0.22
GPATCH4-210	ENST00000498756	SRCIN1	Q9C0H9	1055 aa		13.7	□□□□□ -0.22
GPATCH4-210	ENST00000498756	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
GPATCH4-210	ENST00000498756	ARFGEF2	Q9Y6D5	1785 aa		13.7	□□□□□ -0.22
GPATCH4-210	ENST00000498756	TRIM28	Q13263	835 aa	Known RBP	13.69	□□□□□ -0.22
GPATCH4-210	ENST00000498756	GCKR	Q14397	625 aa		13.69	□□□□□ -0.22
GPATCH4-210	ENST00000498756	RTL5	Q5HYW3	569 aa	Predicted RBP	13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms