RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 SMYD5Q6GMV2 418 aa8.11□□□□□ -1.11
SPTA1-209ENST00000498708 ADGRG1Q9Y653 693 aa8.11□□□□□ -1.11
SPTA1-209ENST00000498708 TRPM1Q7Z4N2 1603 aa8.11□□□□□ -1.11
SPTA1-209ENST00000498708 CICQ96RK0 1608 aaPredicted RBP8.11□□□□□ -1.11
SPTA1-209ENST00000498708 SLIT3O75094 1523 aa8.1□□□□□ -1.11
SPTA1-209ENST00000498708 ABCC6O95255 1503 aa8.1□□□□□ -1.11
SPTA1-209ENST00000498708 LY75O60449 1722 aa8.1□□□□□ -1.11
SPTA1-209ENST00000498708 TMEM134Q9H6X4 195 aa8.1□□□□□ -1.11
SPTA1-209ENST00000498708 KDM2AQ9Y2K7 1162 aa8.1□□□□□ -1.11
SPTA1-209ENST00000498708 PPIP5K1Q6PFW1 1433 aa8.1□□□□□ -1.11
SPTA1-209ENST00000498708 GGCXP38435 758 aa8.09□□□□□ -1.11
SPTA1-209ENST00000498708 LAPTM4AQ15012 233 aa8.09□□□□□ -1.11
SPTA1-209ENST00000498708 ARHGEF25Q86VW2 580 aa8.09□□□□□ -1.11
SPTA1-209ENST00000498708 ZNF516Q92618 1163 aa8.09□□□□□ -1.11
SPTA1-209ENST00000498708 RRAGCQ9HB90 399 aa8.09□□□□□ -1.11
SPTA1-209ENST00000498708 SLC24A1O60721 1099 aa8.08□□□□□ -1.12
SPTA1-209ENST00000498708 OATP04181 439 aa8.08□□□□□ -1.12
SPTA1-209ENST00000498708 PPP1R18Q6NYC8 613 aa8.08□□□□□ -1.12
SPTA1-209ENST00000498708 SMIM5Q71RC9 77 aa8.08□□□□□ -1.12
SPTA1-209ENST00000498708 CPSF1Q10570 1443 aaKnown RBP8.08□□□□□ -1.12
SPTA1-209ENST00000498708 CCDC7Q96M83 1385 aa8.08□□□□□ -1.12
SPTA1-209ENST00000498708 PIK3C2AO00443 1686 aa8.08□□□□□ -1.12
SPTA1-209ENST00000498708 TNRC18O15417 2968 aaPredicted RBP8.07□□□□□ -1.12
SPTA1-209ENST00000498708 RCCD1A6NED2 376 aa8.07□□□□□ -1.12
SPTA1-209ENST00000498708 FOXN1O15353 648 aa8.07□□□□□ -1.12
SPTA1-209ENST00000498708 COPS2P61201 443 aa8.07□□□□□ -1.12
SPTA1-209ENST00000498708 ARHGAP27Q6ZUM4 889 aa8.07□□□□□ -1.12
SPTA1-209ENST00000498708 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.07□□□□□ -1.12
SPTA1-209ENST00000498708 CCNL1Q9UK58 526 aaPredicted RBP8.07□□□□□ -1.12
SPTA1-209ENST00000498708 PCDHB3Q9Y5E6 796 aa8.07□□□□□ -1.12
SPTA1-209ENST00000498708 KCPQ6ZWJ8 1503 aa8.07□□□□□ -1.12
SPTA1-209ENST00000498708 KIAA1210Q9ULL0 1709 aa8.06□□□□□ -1.12
SPTA1-209ENST00000498708 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.06□□□□□ -1.12
SPTA1-209ENST00000498708 TESPA1A2RU30 521 aaPredicted RBP8.06□□□□□ -1.12
SPTA1-209ENST00000498708 IL2RBP14784 551 aa8.06□□□□□ -1.12
SPTA1-209ENST00000498708 HIC1Q14526 733 aa8.06□□□□□ -1.12
SPTA1-209ENST00000498708 KMT5BQ4FZB7 885 aa8.06□□□□□ -1.12
SPTA1-209ENST00000498708 AMIGO3Q86WK7 504 aa8.06□□□□□ -1.12
SPTA1-209ENST00000498708 DCAF11Q8TEB1 546 aa8.06□□□□□ -1.12
SPTA1-209ENST00000498708 SYTL4Q96C24 671 aaPredicted RBP8.06□□□□□ -1.12
SPTA1-209ENST00000498708 TMUB1Q9BVT8 246 aa8.06□□□□□ -1.12
SPTA1-209ENST00000498708 PRKD2Q9BZL6 878 aa8.06□□□□□ -1.12
SPTA1-209ENST00000498708 V9GY48 417 aaPredicted RBP8.06□□□□□ -1.12
SPTA1-209ENST00000498708 N4BP2Q86UW6 1770 aaPredicted RBP8.06□□□□□ -1.12
SPTA1-209ENST00000498708 NSD2O96028 1365 aa8.06□□□□□ -1.12
SPTA1-209ENST00000498708 USP54Q70EL1 1684 aa8.05□□□□□ -1.12
SPTA1-209ENST00000498708 ZPR1O75312 459 aa8.05□□□□□ -1.12
SPTA1-209ENST00000498708 MLLT1Q03111 559 aaPredicted RBP8.05□□□□□ -1.12
SPTA1-209ENST00000498708 C9orf131Q5VYM1 1079 aa8.05□□□□□ -1.12
SPTA1-209ENST00000498708 SMC1BQ8NDV3 1235 aa8.05□□□□□ -1.12
SPTA1-209ENST00000498708 DDX54Q8TDD1 881 aaKnown RBP8.05□□□□□ -1.12
SPTA1-209ENST00000498708 ABHD8Q96I13 439 aa8.05□□□□□ -1.12
SPTA1-209ENST00000498708 PRDM10Q9NQV6 1147 aa8.05□□□□□ -1.12
SPTA1-209ENST00000498708 BCS1LQ9Y276 419 aa8.05□□□□□ -1.12
SPTA1-209ENST00000498708 KIAA1551Q9HCM1 1747 aa8.05□□□□□ -1.12
SPTA1-209ENST00000498708 QRICH2Q9H0J4 1663 aa8.05□□□□□ -1.12
SPTA1-209ENST00000498708 NKX2-3Q8TAU0 364 aa8.04□□□□□ -1.12
SPTA1-209ENST00000498708 NLRP2Q9NX02 1062 aa8.04□□□□□ -1.12
SPTA1-209ENST00000498708 RAB3GAP2Q9H2M9 1393 aa8.04□□□□□ -1.12
SPTA1-209ENST00000498708 PKD1L3Q7Z443 1732 aa8.03□□□□□ -1.12
SPTA1-209ENST00000498708 DOT1LQ8TEK3 1739 aa8.03□□□□□ -1.12
SPTA1-209ENST00000498708 C5P01031 1676 aa8.03□□□□□ -1.12
SPTA1-209ENST00000498708 A0A0G2JLW4 131 aa8.03□□□□□ -1.12
SPTA1-209ENST00000498708 RGS19P49795 217 aa8.03□□□□□ -1.12
SPTA1-209ENST00000498708 Q6ZNB5 142 aa8.03□□□□□ -1.12
SPTA1-209ENST00000498708 MKRN1Q9UHC7 482 aaKnown RBP8.03□□□□□ -1.12
SPTA1-209ENST00000498708 TAF1LQ8IZX4 1826 aa8.03□□□□□ -1.12
SPTA1-209ENST00000498708 C10orf71Q711Q0 1435 aa8.03□□□□□ -1.12
SPTA1-209ENST00000498708 KDM2BQ8NHM5 1336 aa8.03□□□□□ -1.12
SPTA1-209ENST00000498708 PXDNLA1KZ92 1463 aa8.02□□□□□ -1.13
SPTA1-209ENST00000498708 ANKRD36BQ8N2N9 1353 aa8.02□□□□□ -1.13
SPTA1-209ENST00000498708 ACTN4O43707 911 aaKnown RBP8.02□□□□□ -1.13
SPTA1-209ENST00000498708 PXYLP1Q8TE99 480 aa8.02□□□□□ -1.13
SPTA1-209ENST00000498708 TOGARAM1Q9Y4F4 1720 aa8.02□□□□□ -1.13
SPTA1-209ENST00000498708 TNRC6CQ9HCJ0 1690 aaKnown RBP8.02□□□□□ -1.13
SPTA1-209ENST00000498708 KIF13BQ9NQT8 1826 aa8.01□□□□□ -1.13
SPTA1-209ENST00000498708 PLEKHG2Q9H7P9 1386 aa8.01□□□□□ -1.13
SPTA1-209ENST00000498708 SBF1O95248 1867 aa8.01□□□□□ -1.13
SPTA1-209ENST00000498708 GFRA3O60609 400 aa8.01□□□□□ -1.13
SPTA1-209ENST00000498708 CFHP08603 1231 aa8.01□□□□□ -1.13
SPTA1-209ENST00000498708 LBX1P52954 281 aa8.01□□□□□ -1.13
SPTA1-209ENST00000498708 RBM26Q5T8P6 1007 aaKnown RBP8.01□□□□□ -1.13
SPTA1-209ENST00000498708 BLOC1S3Q6QNY0 202 aa8.01□□□□□ -1.13
SPTA1-209ENST00000498708 KCNH5Q8NCM2 988 aa8.01□□□□□ -1.13
SPTA1-209ENST00000498708 FLAD1Q8NFF5 587 aa8.01□□□□□ -1.13
SPTA1-209ENST00000498708 CABP1Q9NZU7 370 aa8.01□□□□□ -1.13
SPTA1-209ENST00000498708 NFAT5O94916 1531 aa8.01□□□□□ -1.13
SPTA1-209ENST00000498708 BRCA1P38398 1863 aaKnown RBP8□□□□□ -1.13
SPTA1-209ENST00000498708 CCDC85CA6NKD9 419 aa8□□□□□ -1.13
SPTA1-209ENST00000498708 GNPATO15228 680 aa8□□□□□ -1.13
SPTA1-209ENST00000498708 CTCFP49711 727 aaPredicted RBP8□□□□□ -1.13
SPTA1-209ENST00000498708 SRPK2P78362 688 aaKnown RBP8□□□□□ -1.13
SPTA1-209ENST00000498708 METTL3Q86U44 580 aaKnown RBP8□□□□□ -1.13
SPTA1-209ENST00000498708 RNF181Q9P0P0 153 aa8□□□□□ -1.13
SPTA1-209ENST00000498708 UBR3Q6ZT12 1888 aa8□□□□□ -1.13
SPTA1-209ENST00000498708 DPEP1P16444 411 aa7.99□□□□□ -1.13
SPTA1-209ENST00000498708 TGFB2P61812 414 aa7.99□□□□□ -1.13
SPTA1-209ENST00000498708 ANKRD24Q8TF21 1146 aa7.99□□□□□ -1.13
SPTA1-209ENST00000498708 ARFGEF1Q9Y6D6 1849 aa7.99□□□□□ -1.13
SPTA1-209ENST00000498708 USP47Q96K76 1375 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms