RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 TRAK1Q9UPV9 953 aa7.27□□□□□ -1.25
CSTF1-207ENST00000498689 PARP3Q9Y6F1 533 aa7.27□□□□□ -1.25
CSTF1-207ENST00000498689 ARFGEF2Q9Y6D5 1785 aa7.26□□□□□ -1.25
CSTF1-207ENST00000498689 IQCA1LA6NCM1 817 aa7.26□□□□□ -1.25
CSTF1-207ENST00000498689 GYS1P13807 737 aa7.26□□□□□ -1.25
CSTF1-207ENST00000498689 IRX5P78411 483 aaPredicted RBP7.26□□□□□ -1.25
CSTF1-207ENST00000498689 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.26□□□□□ -1.25
CSTF1-207ENST00000498689 L3MBTL3Q96JM7 780 aaPredicted RBP7.26□□□□□ -1.25
CSTF1-207ENST00000498689 MON2Q7Z3U7 1717 aa7.25□□□□□ -1.25
CSTF1-207ENST00000498689 ST18O60284 1047 aa7.25□□□□□ -1.25
CSTF1-207ENST00000498689 TRPA1O75762 1119 aa7.25□□□□□ -1.25
CSTF1-207ENST00000498689 EPHX2P34913 555 aa7.25□□□□□ -1.25
CSTF1-207ENST00000498689 DDR1Q08345 913 aa7.25□□□□□ -1.25
CSTF1-207ENST00000498689 FAM50AQ14320 339 aaKnown RBP7.25□□□□□ -1.25
CSTF1-207ENST00000498689 SAPCD2Q86UD0 394 aa7.25□□□□□ -1.25
CSTF1-207ENST00000498689 ANKRD26Q9UPS8 1709 aa7.24□□□□□ -1.25
CSTF1-207ENST00000498689 CACNA1GO43497 2377 aa7.24□□□□□ -1.25
CSTF1-207ENST00000498689 PLEKHG3A1L390 1219 aa7.24□□□□□ -1.25
CSTF1-207ENST00000498689 ITPK1Q13572 414 aa7.24□□□□□ -1.25
CSTF1-207ENST00000498689 Q7L0L9 218 aa7.24□□□□□ -1.25
CSTF1-207ENST00000498689 SYNE4Q8N205 404 aa7.24□□□□□ -1.25
CSTF1-207ENST00000498689 NLGN1Q8N2Q7 840 aa7.24□□□□□ -1.25
CSTF1-207ENST00000498689 RNF186Q9NXI6 227 aa7.24□□□□□ -1.25
CSTF1-207ENST00000498689 FBXO3Q9UK99 471 aa7.24□□□□□ -1.25
CSTF1-207ENST00000498689 RNF123Q5XPI4 1314 aa7.24□□□□□ -1.25
CSTF1-207ENST00000498689 ZNF541Q9H0D2 1346 aa7.24□□□□□ -1.25
CSTF1-207ENST00000498689 CDH23Q9H251 3354 aa7.23□□□□□ -1.25
CSTF1-207ENST00000498689 BCORQ6W2J9 1755 aa7.23□□□□□ -1.25
CSTF1-207ENST00000498689 EN2P19622 333 aaPredicted RBP7.23□□□□□ -1.25
CSTF1-207ENST00000498689 CDK19Q9BWU1 502 aa7.23□□□□□ -1.25
CSTF1-207ENST00000498689 OCEL1Q9H607 264 aa7.23□□□□□ -1.25
CSTF1-207ENST00000498689 HACL1Q9UJ83 578 aa7.23□□□□□ -1.25
CSTF1-207ENST00000498689 NCOR1O75376 2440 aa7.22□□□□□ -1.25
CSTF1-207ENST00000498689 MPRIPQ6WCQ1 1025 aa7.22□□□□□ -1.25
CSTF1-207ENST00000498689 ARHGEF1Q92888 912 aaKnown RBP7.22□□□□□ -1.25
CSTF1-207ENST00000498689 BAHCC1Q9P281 2608 aa7.22□□□□□ -1.25
CSTF1-207ENST00000498689 ANKRD24Q8TF21 1146 aa7.21□□□□□ -1.26
CSTF1-207ENST00000498689 PRO3102Q9H379 93 aa7.21□□□□□ -1.26
CSTF1-207ENST00000498689 SAGE1Q9NXZ1 904 aa7.21□□□□□ -1.26
CSTF1-207ENST00000498689 WDFY4Q6ZS81 3184 aa7.2□□□□□ -1.26
CSTF1-207ENST00000498689 GOLGA2Q08379 1002 aa7.2□□□□□ -1.26
CSTF1-207ENST00000498689 AKAP4Q5JQC9 854 aa7.2□□□□□ -1.26
CSTF1-207ENST00000498689 TRAPPC3LQ5T215 181 aa7.2□□□□□ -1.26
CSTF1-207ENST00000498689 TTLL6Q8N841 843 aa7.2□□□□□ -1.26
CSTF1-207ENST00000498689 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.2□□□□□ -1.26
CSTF1-207ENST00000498689 STXBP5LQ9Y2K9 1186 aa7.2□□□□□ -1.26
CSTF1-207ENST00000498689 INSRP06213 1382 aa7.2□□□□□ -1.26
CSTF1-207ENST00000498689 ROCK1Q13464 1354 aa7.2□□□□□ -1.26
CSTF1-207ENST00000498689 ALPK3Q96L96 1907 aa7.19□□□□□ -1.26
CSTF1-207ENST00000498689 PKD1L2Q7Z442 2459 aa7.19□□□□□ -1.26
CSTF1-207ENST00000498689 FAM155AB1AL88 458 aaPredicted RBP7.19□□□□□ -1.26
CSTF1-207ENST00000498689 C21orf2O43822 256 aa7.19□□□□□ -1.26
CSTF1-207ENST00000498689 CELF2O95319 508 aaKnown RBP7.19□□□□□ -1.26
CSTF1-207ENST00000498689 PKN2Q16513 984 aaKnown RBP7.19□□□□□ -1.26
CSTF1-207ENST00000498689 PNMA8AQ86V59 439 aaPredicted RBP7.19□□□□□ -1.26
CSTF1-207ENST00000498689 SRP68Q9UHB9 627 aaKnown RBP7.19□□□□□ -1.26
CSTF1-207ENST00000498689 CFAP54Q96N23 3096 aa7.19□□□□□ -1.26
CSTF1-207ENST00000498689 MUC6Q6W4X9 2439 aa7.19□□□□□ -1.26
CSTF1-207ENST00000498689 LOC102724428A0A0B4J2F2 783 aa7.18□□□□□ -1.26
CSTF1-207ENST00000498689 VASPP50552 380 aaPredicted RBP7.18□□□□□ -1.26
CSTF1-207ENST00000498689 SIK1P57059 783 aa7.18□□□□□ -1.26
CSTF1-207ENST00000498689 KIF23Q02241 960 aaPredicted RBP7.18□□□□□ -1.26
CSTF1-207ENST00000498689 NOGQ13253 232 aa7.18□□□□□ -1.26
CSTF1-207ENST00000498689 GSE1Q14687 1217 aa7.18□□□□□ -1.26
CSTF1-207ENST00000498689 FBXO46Q6PJ61 603 aaPredicted RBP7.18□□□□□ -1.26
CSTF1-207ENST00000498689 DEFB123Q8N688 67 aa7.18□□□□□ -1.26
CSTF1-207ENST00000498689 ZCRB1Q8TBF4 217 aaKnown RBP7.18□□□□□ -1.26
CSTF1-207ENST00000498689 HHIPL1Q96JK4 782 aa7.18□□□□□ -1.26
CSTF1-207ENST00000498689 ZNF831Q5JPB2 1677 aa7.18□□□□□ -1.26
CSTF1-207ENST00000498689 CARMIL3Q8ND23 1372 aa7.18□□□□□ -1.26
CSTF1-207ENST00000498689 TMEM265A0A087WTH1 108 aa7.17□□□□□ -1.26
CSTF1-207ENST00000498689 POLRMTO00411 1230 aaKnown RBP7.17□□□□□ -1.26
CSTF1-207ENST00000498689 MAP3K12Q12852 859 aa7.17□□□□□ -1.26
CSTF1-207ENST00000498689 MKRN3Q13064 507 aaKnown RBP7.17□□□□□ -1.26
CSTF1-207ENST00000498689 ZNF296Q8WUU4 475 aaPredicted RBP7.17□□□□□ -1.26
CSTF1-207ENST00000498689 DLK2Q6UY11 383 aa7.16□□□□□ -1.26
CSTF1-207ENST00000498689 BICDL1Q6ZP65 573 aa7.16□□□□□ -1.26
CSTF1-207ENST00000498689 ZNF467Q7Z7K2 595 aaPredicted RBP7.16□□□□□ -1.26
CSTF1-207ENST00000498689 KCNH5Q8NCM2 988 aa7.16□□□□□ -1.26
CSTF1-207ENST00000498689 ZNF408Q9H9D4 720 aa7.16□□□□□ -1.26
CSTF1-207ENST00000498689 HDAC9Q9UKV0 1011 aa7.16□□□□□ -1.26
CSTF1-207ENST00000498689 RTCBQ9Y3I0 505 aaKnown RBP7.16□□□□□ -1.26
CSTF1-207ENST00000498689 SYNGAP1Q96PV0 1343 aa7.16□□□□□ -1.26
CSTF1-207ENST00000498689 USP34Q70CQ2 3546 aa7.16□□□□□ -1.26
CSTF1-207ENST00000498689 REV3LO60673 3130 aa7.15□□□□□ -1.26
CSTF1-207ENST00000498689 SNPHO15079 494 aa7.15□□□□□ -1.26
CSTF1-207ENST00000498689 RFC4P35249 363 aa7.15□□□□□ -1.26
CSTF1-207ENST00000498689 ATP6V1AP38606 617 aa7.15□□□□□ -1.26
CSTF1-207ENST00000498689 SRPK2P78362 688 aaKnown RBP7.15□□□□□ -1.26
CSTF1-207ENST00000498689 C3orf67Q6ZVT6 689 aa7.15□□□□□ -1.26
CSTF1-207ENST00000498689 C2CD5Q86YS7 1000 aa7.15□□□□□ -1.26
CSTF1-207ENST00000498689 PIGBQ92521 554 aa7.15□□□□□ -1.26
CSTF1-207ENST00000498689 MARVELD3Q96A59 401 aa7.15□□□□□ -1.26
CSTF1-207ENST00000498689 CSRNP1Q96S65 589 aa7.15□□□□□ -1.26
CSTF1-207ENST00000498689 TAOK3Q9H2K8 898 aa7.15□□□□□ -1.26
CSTF1-207ENST00000498689 MTMR10Q9NXD2 777 aa7.15□□□□□ -1.26
CSTF1-207ENST00000498689 LTBP3Q9NS15 1303 aa7.15□□□□□ -1.26
CSTF1-207ENST00000498689 COL4A5P29400 1685 aa7.15□□□□□ -1.27
CSTF1-207ENST00000498689 TBC1D8O95759 1140 aa7.14□□□□□ -1.27
CSTF1-207ENST00000498689 EPS15P42566 896 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms