RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 GNPATO15228 680 aa7.87□□□□□ -1.15
FXN-205ENST00000498653 GALR2O43603 387 aaPredicted RBP7.87□□□□□ -1.15
FXN-205ENST00000498653 TRPA1O75762 1119 aa7.87□□□□□ -1.15
FXN-205ENST00000498653 GABBR2O75899 941 aa7.87□□□□□ -1.15
FXN-205ENST00000498653 GYS1P13807 737 aa7.87□□□□□ -1.15
FXN-205ENST00000498653 TIE1P35590 1138 aa7.87□□□□□ -1.15
FXN-205ENST00000498653 TMF1P82094 1093 aa7.87□□□□□ -1.15
FXN-205ENST00000498653 GOLGA2Q08379 1002 aa7.87□□□□□ -1.15
FXN-205ENST00000498653 BBXQ8WY36 941 aaPredicted RBP7.87□□□□□ -1.15
FXN-205ENST00000498653 BAHCC1Q9P281 2608 aa7.87□□□□□ -1.15
FXN-205ENST00000498653 AFDNP55196 1824 aaKnown RBP7.87□□□□□ -1.15
FXN-205ENST00000498653 BCORQ6W2J9 1755 aa7.87□□□□□ -1.15
FXN-205ENST00000498653 CACNA1GO43497 2377 aa7.86□□□□□ -1.15
FXN-205ENST00000498653 ZNF541Q9H0D2 1346 aa7.86□□□□□ -1.15
FXN-205ENST00000498653 EN2P19622 333 aaPredicted RBP7.86□□□□□ -1.15
FXN-205ENST00000498653 HMGB2P26583 209 aaKnown RBP7.86□□□□□ -1.15
FXN-205ENST00000498653 DDR1Q08345 913 aa7.86□□□□□ -1.15
FXN-205ENST00000498653 PNMA8AQ86V59 439 aaPredicted RBP7.86□□□□□ -1.15
FXN-205ENST00000498653 DEFB123Q8N688 67 aa7.86□□□□□ -1.15
FXN-205ENST00000498653 TMEM106CQ9BVX2 250 aa7.86□□□□□ -1.15
FXN-205ENST00000498653 MTMR10Q9NXD2 777 aa7.86□□□□□ -1.15
FXN-205ENST00000498653 RNF123Q5XPI4 1314 aa7.85□□□□□ -1.15
FXN-205ENST00000498653 LTN1O94822 1766 aa7.85□□□□□ -1.15
FXN-205ENST00000498653 NLRP2Q9NX02 1062 aa7.85□□□□□ -1.15
FXN-205ENST00000498653 COL11A2P13942 1736 aaPredicted RBP7.85□□□□□ -1.15
FXN-205ENST00000498653 LTBP3Q9NS15 1303 aa7.84□□□□□ -1.15
FXN-205ENST00000498653 COL5A3P25940 1745 aaPredicted RBP7.84□□□□□ -1.15
FXN-205ENST00000498653 PLEKHG3A1L390 1219 aa7.84□□□□□ -1.15
FXN-205ENST00000498653 FAM155AB1AL88 458 aaPredicted RBP7.84□□□□□ -1.15
FXN-205ENST00000498653 NLRP6P59044 892 aa7.84□□□□□ -1.15
FXN-205ENST00000498653 COL26A1Q96A83 441 aa7.84□□□□□ -1.15
FXN-205ENST00000498653 DCBLD2Q96PD2 775 aa7.84□□□□□ -1.15
FXN-205ENST00000498653 C14orf93Q9H972 538 aaKnown RBP7.84□□□□□ -1.15
FXN-205ENST00000498653 GPR153Q6NV75 609 aa7.83□□□□□ -1.16
FXN-205ENST00000498653 ANKRD13DQ6ZTN6 518 aa7.83□□□□□ -1.16
FXN-205ENST00000498653 RYDENQ9NUL5 291 aaKnown RBP7.83□□□□□ -1.16
FXN-205ENST00000498653 ZFHX4Q86UP3 3567 aa7.82□□□□□ -1.16
FXN-205ENST00000498653 MUC6Q6W4X9 2439 aa7.82□□□□□ -1.16
FXN-205ENST00000498653 A0A1W2PPC1 479 aa7.82□□□□□ -1.16
FXN-205ENST00000498653 ITPK1Q13572 414 aa7.82□□□□□ -1.16
FXN-205ENST00000498653 CACNA1SQ13698 1873 aa7.82□□□□□ -1.16
FXN-205ENST00000498653 SYNE4Q8N205 404 aa7.82□□□□□ -1.16
FXN-205ENST00000498653 ZNF296Q8WUU4 475 aaPredicted RBP7.82□□□□□ -1.16
FXN-205ENST00000498653 ARIH1Q9Y4X5 557 aaPredicted RBP7.82□□□□□ -1.16
FXN-205ENST00000498653 CDH23Q9H251 3354 aa7.82□□□□□ -1.16
FXN-205ENST00000498653 TTLL13PA6NNM8 815 aa7.81□□□□□ -1.16
FXN-205ENST00000498653 TNFRSF10AO00220 468 aa7.81□□□□□ -1.16
FXN-205ENST00000498653 CELF2O95319 508 aaKnown RBP7.81□□□□□ -1.16
FXN-205ENST00000498653 CFAP70Q5T0N1 1121 aa7.81□□□□□ -1.16
FXN-205ENST00000498653 ALYREFQ86V81 257 aaKnown RBP7.81□□□□□ -1.16
FXN-205ENST00000498653 TTLL6Q8N841 843 aa7.81□□□□□ -1.16
FXN-205ENST00000498653 CABP2Q9NPB3 220 aa7.81□□□□□ -1.16
FXN-205ENST00000498653 ARFGEF2Q9Y6D5 1785 aa7.81□□□□□ -1.16
FXN-205ENST00000498653 ROCK1Q13464 1354 aa7.81□□□□□ -1.16
FXN-205ENST00000498653 USP31Q70CQ4 1352 aa7.81□□□□□ -1.16
FXN-205ENST00000498653 ANKRD31Q8N7Z5 1873 aa7.81□□□□□ -1.16
FXN-205ENST00000498653 KIF23Q02241 960 aaPredicted RBP7.8□□□□□ -1.16
FXN-205ENST00000498653 MKRN3Q13064 507 aaKnown RBP7.8□□□□□ -1.16
FXN-205ENST00000498653 INTS3Q68E01 1043 aaKnown RBP7.8□□□□□ -1.16
FXN-205ENST00000498653 ARHGEF1Q92888 912 aaKnown RBP7.8□□□□□ -1.16
FXN-205ENST00000498653 TAOK3Q9H2K8 898 aa7.8□□□□□ -1.16
FXN-205ENST00000498653 BMP2KQ9NSY1 1161 aaPredicted RBP7.8□□□□□ -1.16
FXN-205ENST00000498653 HDAC9Q9UKV0 1011 aa7.8□□□□□ -1.16
FXN-205ENST00000498653 BDP1A6H8Y1 2624 aa7.8□□□□□ -1.16
FXN-205ENST00000498653 UNC79Q9P2D8 2635 aa7.8□□□□□ -1.16
FXN-205ENST00000498653 RGPD2P0DJD1 1756 aa7.79□□□□□ -1.16
FXN-205ENST00000498653 MYH14Q7Z406 1995 aaKnown RBP7.79□□□□□ -1.16
FXN-205ENST00000498653 POLRMTO00411 1230 aaKnown RBP7.79□□□□□ -1.16
FXN-205ENST00000498653 SOX12O15370 315 aa7.79□□□□□ -1.16
FXN-205ENST00000498653 SRPK2P78362 688 aaKnown RBP7.79□□□□□ -1.16
FXN-205ENST00000498653 TRPC6Q9Y210 931 aa7.79□□□□□ -1.16
FXN-205ENST00000498653 ZNF831Q5JPB2 1677 aa7.79□□□□□ -1.16
FXN-205ENST00000498653 RPTORQ8N122 1335 aa7.78□□□□□ -1.16
FXN-205ENST00000498653 SMG6Q86US8 1419 aaKnown RBP7.78□□□□□ -1.16
FXN-205ENST00000498653 MON2Q7Z3U7 1717 aa7.78□□□□□ -1.16
FXN-205ENST00000498653 LOC102724428A0A0B4J2F2 783 aa7.78□□□□□ -1.16
FXN-205ENST00000498653 SIK1P57059 783 aa7.78□□□□□ -1.16
FXN-205ENST00000498653 P2RX7Q99572 595 aaKnown RBP7.78□□□□□ -1.16
FXN-205ENST00000498653 CARMIL3Q8ND23 1372 aa7.78□□□□□ -1.16
FXN-205ENST00000498653 C21orf2O43822 256 aa7.77□□□□□ -1.17
FXN-205ENST00000498653 TRAPPC3LQ5T215 181 aa7.77□□□□□ -1.17
FXN-205ENST00000498653 ASTLQ6HA08 431 aaPredicted RBP7.77□□□□□ -1.17
FXN-205ENST00000498653 SPRYD3Q8NCJ5 442 aa7.77□□□□□ -1.17
FXN-205ENST00000498653 KCNH5Q8NCM2 988 aa7.77□□□□□ -1.17
FXN-205ENST00000498653 CSRNP1Q96S65 589 aa7.77□□□□□ -1.17
FXN-205ENST00000498653 TRIM35Q9UPQ4 493 aa7.77□□□□□ -1.17
FXN-205ENST00000498653 TRAK1Q9UPV9 953 aa7.77□□□□□ -1.17
FXN-205ENST00000498653 SLX4Q8IY92 1834 aa7.77□□□□□ -1.17
FXN-205ENST00000498653 NCOR1O75376 2440 aa7.77□□□□□ -1.17
FXN-205ENST00000498653 KDRP35968 1356 aa7.76□□□□□ -1.17
FXN-205ENST00000498653 ANKRD26Q9UPS8 1709 aa7.76□□□□□ -1.17
FXN-205ENST00000498653 ATMINO43313 823 aaPredicted RBP7.76□□□□□ -1.17
FXN-205ENST00000498653 EFCAB3Q8N7B9 438 aa7.76□□□□□ -1.17
FXN-205ENST00000498653 ANKRD24Q8TF21 1146 aa7.76□□□□□ -1.17
FXN-205ENST00000498653 SYMPKQ92797 1274 aaKnown RBP7.76□□□□□ -1.17
FXN-205ENST00000498653 SMARCC1Q92922 1105 aaPredicted RBP7.76□□□□□ -1.17
FXN-205ENST00000498653 RTCBQ9Y3I0 505 aaKnown RBP7.76□□□□□ -1.17
FXN-205ENST00000498653 CACNA1BQ00975 2339 aa7.75□□□□□ -1.17
FXN-205ENST00000498653 HUNKP57058 714 aa7.75□□□□□ -1.17
FXN-205ENST00000498653 MPRIPQ6WCQ1 1025 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms