RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 MAPK8IP3Q9UPT6 1336 aa14.63□□□□□ -0.07
LSAMP-206ENST00000498645 FAM177BA6PVY3 158 aa14.62□□□□□ -0.07
LSAMP-206ENST00000498645 NBPF26B4DH59 902 aa14.62□□□□□ -0.07
LSAMP-206ENST00000498645 NFKBIEO00221 500 aa14.62□□□□□ -0.07
LSAMP-206ENST00000498645 FER1L6Q2WGJ9 1857 aa14.62□□□□□ -0.07
LSAMP-206ENST00000498645 NBPF10Q6P3W6 841 aaKnown RBP14.62□□□□□ -0.07
LSAMP-206ENST00000498645 NBPF15Q8N660 670 aa14.62□□□□□ -0.07
LSAMP-206ENST00000498645 RBM46Q8TBY0 533 aaKnown RBP14.62□□□□□ -0.07
LSAMP-206ENST00000498645 WDR90Q96KV7 1748 aa14.62□□□□□ -0.07
LSAMP-206ENST00000498645 THUMPD2Q9BTF0 503 aaKnown RBP14.62□□□□□ -0.07
LSAMP-206ENST00000498645 PDZRN3Q9UPQ7 1066 aa14.62□□□□□ -0.07
LSAMP-206ENST00000498645 ARFGEF2Q9Y6D5 1785 aa14.61□□□□□ -0.07
LSAMP-206ENST00000498645 NGEFQ8N5V2 710 aa14.61□□□□□ -0.07
LSAMP-206ENST00000498645 ZC3H4Q9UPT8 1303 aaKnown RBP14.61□□□□□ -0.07
LSAMP-206ENST00000498645 DICER1Q9UPY3 1922 aaKnown RBP14.6□□□□□ -0.07
LSAMP-206ENST00000498645 NFE2L2Q16236 605 aa14.6□□□□□ -0.07
LSAMP-206ENST00000498645 CLEC4GQ6UXB4 293 aa14.6□□□□□ -0.07
LSAMP-206ENST00000498645 PNISRQ8TF01 805 aaKnown RBP14.6□□□□□ -0.07
LSAMP-206ENST00000498645 NIP7Q9Y221 180 aaKnown RBP eCLIP14.6□□□□□ -0.07
LSAMP-206ENST00000498645 GLTPD2A6NH11 291 aa14.59□□□□□ -0.07
LSAMP-206ENST00000498645 SRGNP10124 158 aa14.59□□□□□ -0.07
LSAMP-206ENST00000498645 STYK1Q6J9G0 422 aa14.59□□□□□ -0.07
LSAMP-206ENST00000498645 PRPF40BQ6NWY9 871 aaKnown RBP14.59□□□□□ -0.07
LSAMP-206ENST00000498645 CNKSR1Q969H4 720 aa14.59□□□□□ -0.07
LSAMP-206ENST00000498645 PLEKHF1Q96S99 279 aa14.59□□□□□ -0.07
LSAMP-206ENST00000498645 NUP98P52948 1817 aa14.59□□□□□ -0.07
LSAMP-206ENST00000498645 HTRA3P83110 453 aa14.58□□□□□ -0.08
LSAMP-206ENST00000498645 MASTLQ96GX5 879 aa14.58□□□□□ -0.08
LSAMP-206ENST00000498645 TAOK3Q9H2K8 898 aa14.58□□□□□ -0.08
LSAMP-206ENST00000498645 MYL6BP14649 208 aa14.57□□□□□ -0.08
LSAMP-206ENST00000498645 GTF2E1P29083 439 aaPredicted RBP14.57□□□□□ -0.08
LSAMP-206ENST00000498645 FSTL1Q12841 308 aa14.57□□□□□ -0.08
LSAMP-206ENST00000498645 HLFQ16534 295 aa14.57□□□□□ -0.08
LSAMP-206ENST00000498645 ERFEQ4G0M1 354 aa14.57□□□□□ -0.08
LSAMP-206ENST00000498645 TPTE2Q6XPS3 522 aa14.57□□□□□ -0.08
LSAMP-206ENST00000498645 PNNQ9H307 717 aaKnown RBP14.57□□□□□ -0.08
LSAMP-206ENST00000498645 RRP7AQ9Y3A4 280 aaKnown RBP14.57□□□□□ -0.08
LSAMP-206ENST00000498645 VEGFAP15692 232 aaPredicted RBP14.56□□□□□ -0.08
LSAMP-206ENST00000498645 EIF4A1P60842 406 aaKnown RBP14.56□□□□□ -0.08
LSAMP-206ENST00000498645 SMC1BQ8NDV3 1235 aa14.56□□□□□ -0.08
LSAMP-206ENST00000498645 SOGA3Q5TF21 947 aa14.55□□□□□ -0.08
LSAMP-206ENST00000498645 DPY19L2Q6NUT2 758 aa14.55□□□□□ -0.08
LSAMP-206ENST00000498645 KIF6Q6ZMV9 814 aa14.55□□□□□ -0.08
LSAMP-206ENST00000498645 NPR1P16066 1061 aa14.54□□□□□ -0.08
LSAMP-206ENST00000498645 RIPK4P57078 832 aa14.54□□□□□ -0.08
LSAMP-206ENST00000498645 DDX10Q13206 875 aaKnown RBP14.54□□□□□ -0.08
LSAMP-206ENST00000498645 RALBP1Q15311 655 aa14.54□□□□□ -0.08
LSAMP-206ENST00000498645 ZBTB3Q9H5J0 574 aa14.54□□□□□ -0.08
LSAMP-206ENST00000498645 TSPYL4Q9UJ04 414 aa14.54□□□□□ -0.08
LSAMP-206ENST00000498645 MAP3K15Q6ZN16 1313 aa14.53□□□□□ -0.08
LSAMP-206ENST00000498645 LTBP3Q9NS15 1303 aa14.53□□□□□ -0.08
LSAMP-206ENST00000498645 CCDC93Q567U6 631 aa14.53□□□□□ -0.08
LSAMP-206ENST00000498645 TTLL7Q6ZT98 887 aa14.53□□□□□ -0.08
LSAMP-206ENST00000498645 NUTM1Q86Y26 1132 aa14.53□□□□□ -0.08
LSAMP-206ENST00000498645 DNAJC5GQ8N7S2 189 aa14.53□□□□□ -0.08
LSAMP-206ENST00000498645 ABCC12Q96J65 1359 aa14.52□□□□□ -0.08
LSAMP-206ENST00000498645 RGL2O15211 777 aa14.52□□□□□ -0.09
LSAMP-206ENST00000498645 GPTP24298 496 aa14.52□□□□□ -0.09
LSAMP-206ENST00000498645 OLFM4Q6UX06 510 aa14.52□□□□□ -0.09
LSAMP-206ENST00000498645 CCDC146Q8IYE0 955 aa14.52□□□□□ -0.09
LSAMP-206ENST00000498645 DDNO94850 711 aaPredicted RBP14.51□□□□□ -0.09
LSAMP-206ENST00000498645 EIF2S2P20042 333 aaKnown RBP14.51□□□□□ -0.09
LSAMP-206ENST00000498645 NEUROD2Q15784 382 aa14.51□□□□□ -0.09
LSAMP-206ENST00000498645 NYXQ9GZU5 481 aa14.51□□□□□ -0.09
LSAMP-206ENST00000498645 MYBBP1AQ9BQG0 1328 aaKnown RBP14.5□□□□□ -0.09
LSAMP-206ENST00000498645 POTECB2RU33 542 aa14.5□□□□□ -0.09
LSAMP-206ENST00000498645 ERVV-1B6SEH8 477 aa14.5□□□□□ -0.09
LSAMP-206ENST00000498645 C7orf43Q8WVR3 580 aa14.5□□□□□ -0.09
LSAMP-206ENST00000498645 KLRG1Q96E93 195 aa14.5□□□□□ -0.09
LSAMP-206ENST00000498645 ZNF277Q9NRM2 450 aaPredicted RBP14.5□□□□□ -0.09
LSAMP-206ENST00000498645 UBN2Q6ZU65 1347 aa14.49□□□□□ -0.09
LSAMP-206ENST00000498645 KLRG2A4D1S0 409 aaPredicted RBP14.49□□□□□ -0.09
LSAMP-206ENST00000498645 TMPOP42166 694 aaKnown RBP14.49□□□□□ -0.09
LSAMP-206ENST00000498645 FKBP4Q02790 459 aaKnown RBP eCLIP14.49□□□□□ -0.09
LSAMP-206ENST00000498645 LMOD3Q0VAK6 560 aa14.49□□□□□ -0.09
LSAMP-206ENST00000498645 IFFO2Q5TF58 517 aa14.49□□□□□ -0.09
LSAMP-206ENST00000498645 NECTIN2Q92692 538 aa14.49□□□□□ -0.09
LSAMP-206ENST00000498645 RPGRQ92834 1020 aaKnown RBP14.49□□□□□ -0.09
LSAMP-206ENST00000498645 ANXA1P04083 346 aa14.48□□□□□ -0.09
LSAMP-206ENST00000498645 ALDH1B1P30837 517 aa14.48□□□□□ -0.09
LSAMP-206ENST00000498645 WDR43Q15061 677 aaKnown RBP eCLIP14.48□□□□□ -0.09
LSAMP-206ENST00000498645 SUSD4Q5VX71 490 aa14.48□□□□□ -0.09
LSAMP-206ENST00000498645 RTKN2Q8IZC4 609 aa14.48□□□□□ -0.09
LSAMP-206ENST00000498645 LAS1LQ9Y4W2 734 aaKnown RBP14.48□□□□□ -0.09
LSAMP-206ENST00000498645 ERBB4Q15303 1308 aa14.47□□□□□ -0.09
LSAMP-206ENST00000498645 PROSER3Q2NL68 480 aa14.47□□□□□ -0.09
LSAMP-206ENST00000498645 ANKRD36CQ5JPF3 1778 aa14.47□□□□□ -0.09
LSAMP-206ENST00000498645 ZNF541Q9H0D2 1346 aa14.46□□□□□ -0.09
LSAMP-206ENST00000498645 SCN4AP35499 1836 aa14.46□□□□□ -0.09
LSAMP-206ENST00000498645 TCERG1O14776 1098 aaKnown RBP14.46□□□□□ -0.09
LSAMP-206ENST00000498645 POTEIP0CG38 1075 aa14.46□□□□□ -0.09
LSAMP-206ENST00000498645 POTEJP0CG39 1038 aa14.46□□□□□ -0.09
LSAMP-206ENST00000498645 CRY2Q49AN0 593 aa14.46□□□□□ -0.09
LSAMP-206ENST00000498645 GIGYF2Q6Y7W6 1299 aaKnown RBP14.46□□□□□ -0.09
LSAMP-206ENST00000498645 IBTKQ9P2D0 1353 aaPredicted RBP14.46□□□□□ -0.1
LSAMP-206ENST00000498645 NTSR2O95665 410 aa14.45□□□□□ -0.1
LSAMP-206ENST00000498645 IARSP41252 1262 aaKnown RBP14.45□□□□□ -0.1
LSAMP-206ENST00000498645 AIMP1Q12904 312 aaKnown RBP14.45□□□□□ -0.1
LSAMP-206ENST00000498645 PDIA6Q15084 440 aa14.45□□□□□ -0.1
LSAMP-206ENST00000498645 PPP1R42Q7Z4L9 355 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms