RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 TNS4Q8IZW8 715 aa21.61■■□□□ 1.05
MUC1-220ENST00000498431 ARFGEF2Q9Y6D5 1785 aa21.61■■□□□ 1.05
MUC1-220ENST00000498431 LTBP3Q9NS15 1303 aa21.6■■□□□ 1.05
MUC1-220ENST00000498431 BTBD11A6QL63 1104 aa21.6■■□□□ 1.05
MUC1-220ENST00000498431 SRGNP10124 158 aa21.6■■□□□ 1.05
MUC1-220ENST00000498431 PRKAR2BP31323 418 aa21.6■■□□□ 1.05
MUC1-220ENST00000498431 PRPF40BQ6NWY9 871 aaKnown RBP21.6■■□□□ 1.05
MUC1-220ENST00000498431 DZIP3Q86Y13 1208 aaKnown RBP21.6■■□□□ 1.05
MUC1-220ENST00000498431 TAOK3Q9H2K8 898 aa21.6■■□□□ 1.05
MUC1-220ENST00000498431 USP16Q9Y5T5 823 aa21.6■■□□□ 1.05
MUC1-220ENST00000498431 DDNO94850 711 aaPredicted RBP21.59■■□□□ 1.05
MUC1-220ENST00000498431 STYK1Q6J9G0 422 aa21.59■■□□□ 1.05
MUC1-220ENST00000498431 RSPH6AQ9H0K4 717 aa21.59■■□□□ 1.05
MUC1-220ENST00000498431 NPHP1O15259 732 aa21.58■■□□□ 1.05
MUC1-220ENST00000498431 ST5P78524 1137 aa21.58■■□□□ 1.05
MUC1-220ENST00000498431 CNKSR1Q969H4 720 aa21.58■■□□□ 1.05
MUC1-220ENST00000498431 NPM2Q86SE8 214 aaKnown RBP21.57■■□□□ 1.04
MUC1-220ENST00000498431 MASTLQ96GX5 879 aa21.56■■□□□ 1.04
MUC1-220ENST00000498431 CHADLQ6NUI6 762 aa21.55■■□□□ 1.04
MUC1-220ENST00000498431 MCM10Q7L590 875 aa21.54■■□□□ 1.04
MUC1-220ENST00000498431 NBPF5PQ86XG9 351 aaPredicted RBP21.54■■□□□ 1.04
MUC1-220ENST00000498431 C7orf43Q8WVR3 580 aa21.54■■□□□ 1.04
MUC1-220ENST00000498431 MKRN1Q9UHC7 482 aaKnown RBP21.53■■□□□ 1.04
MUC1-220ENST00000498431 NBPF26B4DH59 902 aa21.52■■□□□ 1.04
MUC1-220ENST00000498431 DCTN1Q14203 1278 aa21.52■■□□□ 1.04
MUC1-220ENST00000498431 SOGA3Q5TF21 947 aa21.52■■□□□ 1.04
MUC1-220ENST00000498431 NBPF10Q6P3W6 841 aaKnown RBP21.52■■□□□ 1.04
MUC1-220ENST00000498431 OLFM4Q6UX06 510 aa21.52■■□□□ 1.04
MUC1-220ENST00000498431 CLEC4GQ6UXB4 293 aa21.52■■□□□ 1.04
MUC1-220ENST00000498431 NBPF15Q8N660 670 aa21.52■■□□□ 1.04
MUC1-220ENST00000498431 CREBZFQ9NS37 354 aa21.52■■□□□ 1.04
MUC1-220ENST00000498431 SNRPA1P09661 255 aaKnown RBP21.51■■□□□ 1.03
MUC1-220ENST00000498431 CFAP53Q96M91 514 aa21.5■■□□□ 1.03
MUC1-220ENST00000498431 KLRG2A4D1S0 409 aaPredicted RBP21.49■■□□□ 1.03
MUC1-220ENST00000498431 FAM177BA6PVY3 158 aa21.49■■□□□ 1.03
MUC1-220ENST00000498431 NPR1P16066 1061 aa21.49■■□□□ 1.03
MUC1-220ENST00000498431 CCDC93Q567U6 631 aa21.49■■□□□ 1.03
MUC1-220ENST00000498431 L3MBTL3Q96JM7 780 aaPredicted RBP21.49■■□□□ 1.03
MUC1-220ENST00000498431 ZNF277Q9NRM2 450 aaPredicted RBP21.49■■□□□ 1.03
MUC1-220ENST00000498431 SCN4AP35499 1836 aa21.49■■□□□ 1.03
MUC1-220ENST00000498431 ZNF541Q9H0D2 1346 aa21.49■■□□□ 1.03
MUC1-220ENST00000498431 U2AF1L5P0DN76 240 aaPredicted RBP21.48■■□□□ 1.03
MUC1-220ENST00000498431 U2AF1Q01081 240 aaKnown RBP eCLIP21.48■■□□□ 1.03
MUC1-220ENST00000498431 TAF1DQ9H5J8 278 aaPredicted RBP21.48■■□□□ 1.03
MUC1-220ENST00000498431 NIP7Q9Y221 180 aaKnown RBP eCLIP21.48■■□□□ 1.03
MUC1-220ENST00000498431 ZNF652Q9Y2D9 606 aa21.48■■□□□ 1.03
MUC1-220ENST00000498431 PASKQ96RG2 1323 aa21.48■■□□□ 1.03
MUC1-220ENST00000498431 FKBP4Q02790 459 aaKnown RBP eCLIP21.47■■□□□ 1.03
MUC1-220ENST00000498431 HLFQ16534 295 aa21.47■■□□□ 1.03
MUC1-220ENST00000498431 RTF1Q92541 710 aaKnown RBP21.47■■□□□ 1.03
MUC1-220ENST00000498431 IQCA1LA6NCM1 817 aa21.46■■□□□ 1.03
MUC1-220ENST00000498431 LDHDQ86WU2 507 aa21.46■■□□□ 1.03
MUC1-220ENST00000498431 NUDCQ9Y266 331 aa21.46■■□□□ 1.03
MUC1-220ENST00000498431 CNTNAP1P78357 1384 aa21.46■■□□□ 1.03
MUC1-220ENST00000498431 PPP2R1AP30153 589 aa21.45■■□□□ 1.02
MUC1-220ENST00000498431 TPTE2Q6XPS3 522 aa21.45■■□□□ 1.02
MUC1-220ENST00000498431 MIS18AQ9NYP9 233 aa21.45■■□□□ 1.02
MUC1-220ENST00000498431 LAMB4A4D0S4 1761 aa21.44■■□□□ 1.02
MUC1-220ENST00000498431 ADAMTSL1Q8N6G6 1762 aa21.44■■□□□ 1.02
MUC1-220ENST00000498431 ITGBL1O95965 494 aaPredicted RBP21.43■■□□□ 1.02
MUC1-220ENST00000498431 EAPPQ56P03 285 aaPredicted RBP21.43■■□□□ 1.02
MUC1-220ENST00000498431 RGL2O15211 777 aa21.42■■□□□ 1.02
MUC1-220ENST00000498431 FOXN1O15353 648 aa21.42■■□□□ 1.02
MUC1-220ENST00000498431 SNED1Q8TER0 1413 aa21.42■■□□□ 1.02
MUC1-220ENST00000498431 ABCC12Q96J65 1359 aa21.42■■□□□ 1.02
MUC1-220ENST00000498431 TAF7Q15545 349 aaPredicted RBP21.41■■□□□ 1.02
MUC1-220ENST00000498431 RTKN2Q8IZC4 609 aa21.41■■□□□ 1.02
MUC1-220ENST00000498431 SYNE4Q8N205 404 aa21.41■■□□□ 1.02
MUC1-220ENST00000498431 HACL1Q9UJ83 578 aa21.41■■□□□ 1.02
MUC1-220ENST00000498431 RNF123Q5XPI4 1314 aa21.4■■□□□ 1.02
MUC1-220ENST00000498431 DLG5Q8TDM6 1919 aa21.4■■□□□ 1.02
MUC1-220ENST00000498431 HTATSF1O43719 755 aaKnown RBP21.4■■□□□ 1.02
MUC1-220ENST00000498431 IARSP41252 1262 aaKnown RBP21.4■■□□□ 1.02
MUC1-220ENST00000498431 NUTM1Q86Y26 1132 aa21.4■■□□□ 1.02
MUC1-220ENST00000498431 NGEFQ8N5V2 710 aa21.4■■□□□ 1.02
MUC1-220ENST00000498431 COL4A5P29400 1685 aa21.4■■□□□ 1.02
MUC1-220ENST00000498431 NUP98P52948 1817 aa21.39■■□□□ 1.02
MUC1-220ENST00000498431 KDM3BQ7LBC6 1761 aa21.39■■□□□ 1.01
MUC1-220ENST00000498431 FZD9O00144 591 aa21.39■■□□□ 1.01
MUC1-220ENST00000498431 ALDH1B1P30837 517 aa21.39■■□□□ 1.01
MUC1-220ENST00000498431 EPHX2P34913 555 aa21.39■■□□□ 1.01
MUC1-220ENST00000498431 VEGFBP49765 207 aa21.39■■□□□ 1.01
MUC1-220ENST00000498431 SLC51AQ86UW1 340 aa21.39■■□□□ 1.01
MUC1-220ENST00000498431 CLEC11AQ9Y240 323 aa21.39■■□□□ 1.01
MUC1-220ENST00000498431 TMEM88BA6NKF7 163 aa21.38■■□□□ 1.01
MUC1-220ENST00000498431 GTF2E1P29083 439 aaPredicted RBP21.38■■□□□ 1.01
MUC1-220ENST00000498431 CRY2Q49AN0 593 aa21.37■■□□□ 1.01
MUC1-220ENST00000498431 MAP1SQ66K74 1059 aaPredicted RBP21.37■■□□□ 1.01
MUC1-220ENST00000498431 TTLL7Q6ZT98 887 aa21.37■■□□□ 1.01
MUC1-220ENST00000498431 LTBP1Q14766 1721 aa21.35■■□□□ 1.01
MUC1-220ENST00000498431 UBN2Q6ZU65 1347 aa21.35■■□□□ 1.01
MUC1-220ENST00000498431 PSMD1Q99460 953 aa21.35■■□□□ 1.01
MUC1-220ENST00000498431 RRP7AQ9Y3A4 280 aaKnown RBP21.35■■□□□ 1.01
MUC1-220ENST00000498431 MAP3K15Q6ZN16 1313 aa21.34■■□□□ 1.01
MUC1-220ENST00000498431 ERVV-1B6SEH8 477 aa21.34■■□□□ 1.01
MUC1-220ENST00000498431 GPTP24298 496 aa21.34■■□□□ 1.01
MUC1-220ENST00000498431 CNTROBQ8N137 903 aa21.34■■□□□ 1.01
MUC1-220ENST00000498431 GPC2Q8N158 579 aa21.34■■□□□ 1.01
MUC1-220ENST00000498431 THUMPD2Q9BTF0 503 aaKnown RBP21.34■■□□□ 1.01
MUC1-220ENST00000498431 NYXQ9GZU5 481 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms