RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 TAF1DQ9H5J8 278 aaPredicted RBP15.79■□□□□ 0.12
CDK9-205ENST00000498339 TIMELESSQ9UNS1 1208 aa15.79■□□□□ 0.12
CDK9-205ENST00000498339 IL6STP40189 918 aaPredicted RBP15.78■□□□□ 0.12
CDK9-205ENST00000498339 LBX1P52954 281 aa15.78■□□□□ 0.12
CDK9-205ENST00000498339 CCDC93Q567U6 631 aa15.78■□□□□ 0.12
CDK9-205ENST00000498339 ZNF496Q96IT1 587 aaPredicted RBP15.78■□□□□ 0.12
CDK9-205ENST00000498339 TEX13AQ9BXU3 409 aaPredicted RBP15.78■□□□□ 0.12
CDK9-205ENST00000498339 SRGNP10124 158 aa15.77■□□□□ 0.12
CDK9-205ENST00000498339 ZNF790Q6PG37 636 aa15.77■□□□□ 0.12
CDK9-205ENST00000498339 ZNF541Q9H0D2 1346 aa15.76■□□□□ 0.11
CDK9-205ENST00000498339 DIAPH1O60610 1272 aaKnown RBP15.76■□□□□ 0.11
CDK9-205ENST00000498339 NBPF5PQ86XG9 351 aaPredicted RBP15.76■□□□□ 0.11
CDK9-205ENST00000498339 DZIP3Q86Y13 1208 aaKnown RBP15.76■□□□□ 0.11
CDK9-205ENST00000498339 L3MBTL3Q96JM7 780 aaPredicted RBP15.76■□□□□ 0.11
CDK9-205ENST00000498339 HACL1Q9UJ83 578 aa15.76■□□□□ 0.11
CDK9-205ENST00000498339 ADAMTSL1Q8N6G6 1762 aa15.76■□□□□ 0.11
CDK9-205ENST00000498339 CAMTA2O94983 1202 aa15.75■□□□□ 0.11
CDK9-205ENST00000498339 A1BGP04217 495 aa15.75■□□□□ 0.11
CDK9-205ENST00000498339 FMNL2Q96PY5 1086 aa15.75■□□□□ 0.11
CDK9-205ENST00000498339 ZNF277Q9NRM2 450 aaPredicted RBP15.75■□□□□ 0.11
CDK9-205ENST00000498339 ABT1Q9ULW3 272 aaKnown RBP15.75■□□□□ 0.11
CDK9-205ENST00000498339 RNF123Q5XPI4 1314 aa15.74■□□□□ 0.11
CDK9-205ENST00000498339 GNAT3A8MTJ3 354 aa15.74■□□□□ 0.11
CDK9-205ENST00000498339 EPHX2P34913 555 aa15.74■□□□□ 0.11
CDK9-205ENST00000498339 FAM161AQ3B820 660 aa15.74■□□□□ 0.11
CDK9-205ENST00000498339 PAXIP1Q6ZW49 1069 aaPredicted RBP15.74■□□□□ 0.11
CDK9-205ENST00000498339 WBP1LQ9NX94 342 aa15.74■□□□□ 0.11
CDK9-205ENST00000498339 U2SURPO15042 1029 aaKnown RBP15.73■□□□□ 0.11
CDK9-205ENST00000498339 FKBP4Q02790 459 aaKnown RBP eCLIP15.73■□□□□ 0.11
CDK9-205ENST00000498339 DEFB115Q30KQ5 88 aa15.73■□□□□ 0.11
CDK9-205ENST00000498339 MAP1SQ66K74 1059 aaPredicted RBP15.73■□□□□ 0.11
CDK9-205ENST00000498339 GAS2L2Q8NHY3 880 aa15.73■□□□□ 0.11
CDK9-205ENST00000498339 ZNF652Q9Y2D9 606 aa15.73■□□□□ 0.11
CDK9-205ENST00000498339 TRPM7Q96QT4 1865 aa15.73■□□□□ 0.11
CDK9-205ENST00000498339 ITGBL1O95965 494 aaPredicted RBP15.72■□□□□ 0.11
CDK9-205ENST00000498339 HSPA8P11142 646 aaKnown RBP15.72■□□□□ 0.11
CDK9-205ENST00000498339 NPR1P16066 1061 aa15.72■□□□□ 0.11
CDK9-205ENST00000498339 PIP4K2AP48426 406 aaPredicted RBP15.72■□□□□ 0.11
CDK9-205ENST00000498339 AMER1Q5JTC6 1135 aaPredicted RBP15.72■□□□□ 0.11
CDK9-205ENST00000498339 PNMA8AQ86V59 439 aaPredicted RBP15.72■□□□□ 0.11
CDK9-205ENST00000498339 ABHD8Q96I13 439 aa15.72■□□□□ 0.11
CDK9-205ENST00000498339 FAM177BA6PVY3 158 aa15.71■□□□□ 0.11
CDK9-205ENST00000498339 MAP2K1Q02750 393 aaPredicted RBP15.71■□□□□ 0.11
CDK9-205ENST00000498339 GRM1Q13255 1194 aa15.71■□□□□ 0.11
CDK9-205ENST00000498339 CNGB1Q14028 1251 aaPredicted RBP15.71■□□□□ 0.11
CDK9-205ENST00000498339 CC2D1BQ5T0F9 858 aaKnown RBP15.71■□□□□ 0.11
CDK9-205ENST00000498339 CNTROBQ8N137 903 aa15.71■□□□□ 0.11
CDK9-205ENST00000498339 IL17REQ8NFR9 667 aa15.71■□□□□ 0.11
CDK9-205ENST00000498339 WDR33Q9C0J8 1336 aaKnown RBP15.7■□□□□ 0.1
CDK9-205ENST00000498339 RASSF10A6NK89 507 aa15.7■□□□□ 0.1
CDK9-205ENST00000498339 BTBD11A6QL63 1104 aa15.7■□□□□ 0.1
CDK9-205ENST00000498339 SLC34A2O95436 690 aa15.7■□□□□ 0.1
CDK9-205ENST00000498339 TRIM26Q12899 539 aaPredicted RBP15.7■□□□□ 0.1
CDK9-205ENST00000498339 OLFM4Q6UX06 510 aa15.7■□□□□ 0.1
CDK9-205ENST00000498339 RTKN2Q8IZC4 609 aa15.7■□□□□ 0.1
CDK9-205ENST00000498339 BEGAINQ9BUH8 593 aa15.7■□□□□ 0.1
CDK9-205ENST00000498339 THSD7BQ9C0I4 1608 aa15.69■□□□□ 0.1
CDK9-205ENST00000498339 IARSP41252 1262 aaKnown RBP15.69■□□□□ 0.1
CDK9-205ENST00000498339 C7orf43Q8WVR3 580 aa15.69■□□□□ 0.1
CDK9-205ENST00000498339 PCGF6Q9BYE7 350 aa15.69■□□□□ 0.1
CDK9-205ENST00000498339 NIP7Q9Y221 180 aaKnown RBP eCLIP15.69■□□□□ 0.1
CDK9-205ENST00000498339 GJA3Q9Y6H8 435 aa15.69■□□□□ 0.1
CDK9-205ENST00000498339 CCDC85CA6NKD9 419 aa15.68■□□□□ 0.1
CDK9-205ENST00000498339 GTF2E1P29083 439 aaPredicted RBP15.68■□□□□ 0.1
CDK9-205ENST00000498339 LMOD1P29536 600 aaPredicted RBP15.68■□□□□ 0.1
CDK9-205ENST00000498339 TPTE2Q6XPS3 522 aa15.68■□□□□ 0.1
CDK9-205ENST00000498339 JDP2Q8WYK2 163 aa15.68■□□□□ 0.1
CDK9-205ENST00000498339 LAMB4A4D0S4 1761 aa15.67■□□□□ 0.1
CDK9-205ENST00000498339 COL3A1P02461 1466 aaPredicted RBP15.67■□□□□ 0.1
CDK9-205ENST00000498339 KCNQ3O43525 872 aa15.67■□□□□ 0.1
CDK9-205ENST00000498339 CLEC4GQ6UXB4 293 aa15.67■□□□□ 0.1
CDK9-205ENST00000498339 GPC2Q8N158 579 aa15.67■□□□□ 0.1
CDK9-205ENST00000498339 LTBP1Q14766 1721 aa15.66■□□□□ 0.1
CDK9-205ENST00000498339 FZD9O00144 591 aa15.66■□□□□ 0.1
CDK9-205ENST00000498339 ECE1P42892 770 aa15.66■□□□□ 0.1
CDK9-205ENST00000498339 SYNE4Q8N205 404 aa15.66■□□□□ 0.1
CDK9-205ENST00000498339 CFAP44Q96MT7 982 aa15.66■□□□□ 0.1
CDK9-205ENST00000498339 USP16Q9Y5T5 823 aa15.66■□□□□ 0.1
CDK9-205ENST00000498339 CLSPNQ9HAW4 1339 aa15.66■□□□□ 0.1
CDK9-205ENST00000498339 CEMIPQ8WUJ3 1361 aa15.65■□□□□ 0.1
CDK9-205ENST00000498339 PRAMEF22A3QJZ6 481 aa15.65■□□□□ 0.1
CDK9-205ENST00000498339 ALDH1B1P30837 517 aa15.65■□□□□ 0.1
CDK9-205ENST00000498339 EIF6P56537 245 aaKnown RBP15.65■□□□□ 0.1
CDK9-205ENST00000498339 MLLT1Q03111 559 aaPredicted RBP15.65■□□□□ 0.1
CDK9-205ENST00000498339 CAPNS2Q96L46 248 aa15.65■□□□□ 0.1
CDK9-205ENST00000498339 DDX21Q9NR30 783 aaKnown RBP eCLIP15.65■□□□□ 0.1
CDK9-205ENST00000498339 NUP98P52948 1817 aa15.65■□□□□ 0.1
CDK9-205ENST00000498339 SNRPA1P09661 255 aaKnown RBP15.63■□□□□ 0.09
CDK9-205ENST00000498339 CYP4F22Q6NT55 531 aa15.63■□□□□ 0.09
CDK9-205ENST00000498339 RTF1Q92541 710 aaKnown RBP15.63■□□□□ 0.09
CDK9-205ENST00000498339 KIF7Q2M1P5 1343 aa15.63■□□□□ 0.09
CDK9-205ENST00000498339 KLRG2A4D1S0 409 aaPredicted RBP15.62■□□□□ 0.09
CDK9-205ENST00000498339 PRKAR2BP31323 418 aa15.62■□□□□ 0.09
CDK9-205ENST00000498339 RPGRQ92834 1020 aaKnown RBP15.62■□□□□ 0.09
CDK9-205ENST00000498339 TSKSQ9UJT2 592 aa15.62■□□□□ 0.09
CDK9-205ENST00000498339 COL4A5P29400 1685 aa15.62■□□□□ 0.09
CDK9-205ENST00000498339 CASP8AP2Q9UKL3 1982 aa15.62■□□□□ 0.09
CDK9-205ENST00000498339 FMR1Q06787 632 aaKnown RBP eCLIP15.61■□□□□ 0.09
CDK9-205ENST00000498339 LARGE2Q8N3Y3 721 aa15.61■□□□□ 0.09
CDK9-205ENST00000498339 GPR101Q96P66 508 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms