RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 KSR2Q6VAB6 950 aa22.35■■□□□ 1.17
CTDSP1-215ENST00000498160 ARHGEF1Q92888 912 aaKnown RBP22.35■■□□□ 1.17
CTDSP1-215ENST00000498160 C4AP0C0L4 1744 aa22.34■■□□□ 1.17
CTDSP1-215ENST00000498160 TUBGCP6Q96RT7 1819 aa22.34■■□□□ 1.17
CTDSP1-215ENST00000498160 SCN7AQ01118 1682 aa22.34■■□□□ 1.17
CTDSP1-215ENST00000498160 BCAR3O75815 825 aa22.34■■□□□ 1.17
CTDSP1-215ENST00000498160 PHF14O94880 888 aa22.34■■□□□ 1.17
CTDSP1-215ENST00000498160 AIMP1Q12904 312 aaKnown RBP22.34■■□□□ 1.17
CTDSP1-215ENST00000498160 RIC3Q7Z5B4 369 aa22.34■■□□□ 1.17
CTDSP1-215ENST00000498160 SLC16A10Q8TF71 515 aa22.34■■□□□ 1.17
CTDSP1-215ENST00000498160 BCORQ6W2J9 1755 aa22.34■■□□□ 1.17
CTDSP1-215ENST00000498160 PXDNLA1KZ92 1463 aa22.34■■□□□ 1.17
CTDSP1-215ENST00000498160 PNPLA7Q6ZV29 1317 aa22.33■■□□□ 1.17
CTDSP1-215ENST00000498160 USP42Q9H9J4 1324 aaKnown RBP22.33■■□□□ 1.17
CTDSP1-215ENST00000498160 ARXQ96QS3 562 aa22.33■■□□□ 1.17
CTDSP1-215ENST00000498160 NOB1Q9ULX3 412 aaKnown RBP22.33■■□□□ 1.17
CTDSP1-215ENST00000498160 NEXNQ0ZGT2 675 aa22.32■■□□□ 1.16
CTDSP1-215ENST00000498160 ATF7IPQ6VMQ6 1270 aa22.32■■□□□ 1.16
CTDSP1-215ENST00000498160 CAMTA2O94983 1202 aa22.31■■□□□ 1.16
CTDSP1-215ENST00000498160 GIGYF2Q6Y7W6 1299 aaKnown RBP22.31■■□□□ 1.16
CTDSP1-215ENST00000498160 TTLL7Q6ZT98 887 aa22.31■■□□□ 1.16
CTDSP1-215ENST00000498160 G2E3Q7L622 706 aa22.31■■□□□ 1.16
CTDSP1-215ENST00000498160 DNAAF4Q8WXU2 420 aa22.31■■□□□ 1.16
CTDSP1-215ENST00000498160 FRAT1Q92837 279 aaPredicted RBP22.31■■□□□ 1.16
CTDSP1-215ENST00000498160 TBC1D2BQ9UPU7 963 aa22.31■■□□□ 1.16
CTDSP1-215ENST00000498160 ARFGEF2Q9Y6D5 1785 aa22.3■■□□□ 1.16
CTDSP1-215ENST00000498160 IBTKQ9P2D0 1353 aaPredicted RBP22.29■■□□□ 1.16
CTDSP1-215ENST00000498160 PI4KAP2A4QPH2 592 aa22.29■■□□□ 1.16
CTDSP1-215ENST00000498160 MSH5O43196 834 aa22.29■■□□□ 1.16
CTDSP1-215ENST00000498160 COL23A1Q86Y22 540 aaPredicted RBP22.29■■□□□ 1.16
CTDSP1-215ENST00000498160 NLGN1Q8N2Q7 840 aa22.29■■□□□ 1.16
CTDSP1-215ENST00000498160 PI4KAP1Q8N8J0 262 aa22.29■■□□□ 1.16
CTDSP1-215ENST00000498160 MAP3K2Q9Y2U5 619 aa22.29■■□□□ 1.16
CTDSP1-215ENST00000498160 ATP10DQ9P241 1426 aa22.29■■□□□ 1.16
CTDSP1-215ENST00000498160 FTSJ3Q8IY81 847 aaKnown RBP22.28■■□□□ 1.16
CTDSP1-215ENST00000498160 METTL22Q9BUU2 404 aaPredicted RBP22.28■■□□□ 1.16
CTDSP1-215ENST00000498160 ZBTB3Q9H5J0 574 aa22.28■■□□□ 1.16
CTDSP1-215ENST00000498160 ADCY9O60503 1353 aa22.27■■□□□ 1.16
CTDSP1-215ENST00000498160 TCIRG1Q13488 830 aa22.27■■□□□ 1.16
CTDSP1-215ENST00000498160 PDE3AQ14432 1141 aa22.27■■□□□ 1.16
CTDSP1-215ENST00000498160 USPL1Q5W0Q7 1092 aa22.27■■□□□ 1.16
CTDSP1-215ENST00000498160 NUP98P52948 1817 aa22.27■■□□□ 1.15
CTDSP1-215ENST00000498160 ANKRD36CQ5JPF3 1778 aa22.26■■□□□ 1.15
CTDSP1-215ENST00000498160 TRIM27P14373 513 aa22.26■■□□□ 1.15
CTDSP1-215ENST00000498160 CCT4P50991 539 aaKnown RBP22.26■■□□□ 1.15
CTDSP1-215ENST00000498160 RRP1P56182 461 aaKnown RBP22.26■■□□□ 1.15
CTDSP1-215ENST00000498160 PARP10Q53GL7 1025 aa22.26■■□□□ 1.15
CTDSP1-215ENST00000498160 AMIGO3Q86WK7 504 aa22.26■■□□□ 1.15
CTDSP1-215ENST00000498160 N4BP2Q86UW6 1770 aaPredicted RBP22.25■■□□□ 1.15
CTDSP1-215ENST00000498160 TRIM28Q13263 835 aaKnown RBP22.25■■□□□ 1.15
CTDSP1-215ENST00000498160 DZIP1LQ8IYY4 767 aaKnown RBP22.25■■□□□ 1.15
CTDSP1-215ENST00000498160 LINS1Q8NG48 757 aa22.25■■□□□ 1.15
CTDSP1-215ENST00000498160 ABCC4O15439 1325 aa22.25■■□□□ 1.15
CTDSP1-215ENST00000498160 RNF123Q5XPI4 1314 aa22.25■■□□□ 1.15
CTDSP1-215ENST00000498160 ALDH1L1O75891 902 aa22.24■■□□□ 1.15
CTDSP1-215ENST00000498160 GYS1P13807 737 aa22.24■■□□□ 1.15
CTDSP1-215ENST00000498160 CHMP4BQ9H444 224 aaKnown RBP22.24■■□□□ 1.15
CTDSP1-215ENST00000498160 CASZ1Q86V15 1759 aa22.23■■□□□ 1.15
CTDSP1-215ENST00000498160 R3HDM1Q15032 1099 aaKnown RBP22.23■■□□□ 1.15
CTDSP1-215ENST00000498160 CCDC191Q8NCU4 936 aa22.23■■□□□ 1.15
CTDSP1-215ENST00000498160 SRCIN1Q9C0H9 1055 aa22.23■■□□□ 1.15
CTDSP1-215ENST00000498160 SRP68Q9UHB9 627 aaKnown RBP22.23■■□□□ 1.15
CTDSP1-215ENST00000498160 HLFQ16534 295 aa22.22■■□□□ 1.15
CTDSP1-215ENST00000498160 SLC4A10Q6U841 1118 aa22.22■■□□□ 1.15
CTDSP1-215ENST00000498160 SETDB2Q96T68 719 aa22.22■■□□□ 1.15
CTDSP1-215ENST00000498160 MYD88Q99836 296 aa22.22■■□□□ 1.15
CTDSP1-215ENST00000498160 F6X3S4 739 aa22.21■■□□□ 1.15
CTDSP1-215ENST00000498160 INTS3Q68E01 1043 aaKnown RBP22.21■■□□□ 1.15
CTDSP1-215ENST00000498160 PPP1R42Q7Z4L9 355 aa22.21■■□□□ 1.15
CTDSP1-215ENST00000498160 ZNF34Q8IZ26 560 aa22.21■■□□□ 1.15
CTDSP1-215ENST00000498160 ISCA1Q9BUE6 129 aa22.21■■□□□ 1.15
CTDSP1-215ENST00000498160 BCL2L12Q9HB09 334 aa22.21■■□□□ 1.15
CTDSP1-215ENST00000498160 HDAC5Q9UQL6 1122 aa22.21■■□□□ 1.15
CTDSP1-215ENST00000498160 CARMIL3Q8ND23 1372 aa22.21■■□□□ 1.15
CTDSP1-215ENST00000498160 HSP90B1P14625 803 aaKnown RBP22.2■■□□□ 1.14
CTDSP1-215ENST00000498160 BEND3Q5T5X7 828 aa22.2■■□□□ 1.14
CTDSP1-215ENST00000498160 NYXQ9GZU5 481 aa22.2■■□□□ 1.14
CTDSP1-215ENST00000498160 MTFR1LQ9H019 292 aa22.2■■□□□ 1.14
CTDSP1-215ENST00000498160 NIP7Q9Y221 180 aaKnown RBP eCLIP22.2■■□□□ 1.14
CTDSP1-215ENST00000498160 SMIM5Q71RC9 77 aa22.19■■□□□ 1.14
CTDSP1-215ENST00000498160 CWC25Q9NXE8 425 aaPredicted RBP22.19■■□□□ 1.14
CTDSP1-215ENST00000498160 SUPT16HQ9Y5B9 1047 aaKnown RBP22.19■■□□□ 1.14
CTDSP1-215ENST00000498160 NEURL1BA8MQ27 555 aa22.18■■□□□ 1.14
CTDSP1-215ENST00000498160 FKBP8Q14318 412 aa22.18■■□□□ 1.14
CTDSP1-215ENST00000498160 COL24A1Q17RW2 1714 aa22.17■■□□□ 1.14
CTDSP1-215ENST00000498160 TM4SF1P30408 202 aa22.17■■□□□ 1.14
CTDSP1-215ENST00000498160 TBC1D9BQ66K14 1250 aa22.17■■□□□ 1.14
CTDSP1-215ENST00000498160 AFDNP55196 1824 aaKnown RBP22.17■■□□□ 1.14
CTDSP1-215ENST00000498160 POLD1P28340 1107 aa22.16■■□□□ 1.14
CTDSP1-215ENST00000498160 NFIXQ14938 502 aa22.16■■□□□ 1.14
CTDSP1-215ENST00000498160 NLRP10Q86W26 655 aa22.16■■□□□ 1.14
CTDSP1-215ENST00000498160 CLUAP1Q96AJ1 413 aa22.16■■□□□ 1.14
CTDSP1-215ENST00000498160 DDX19BQ9UMR2 479 aa22.16■■□□□ 1.14
CTDSP1-215ENST00000498160 PARP3Q9Y6F1 533 aa22.16■■□□□ 1.14
CTDSP1-215ENST00000498160 PLIN1O60240 522 aa22.15■■□□□ 1.14
CTDSP1-215ENST00000498160 IGKV5-2P06315 115 aa22.15■■□□□ 1.14
CTDSP1-215ENST00000498160 GCKRQ14397 625 aa22.15■■□□□ 1.14
CTDSP1-215ENST00000498160 TPTE2Q6XPS3 522 aa22.15■■□□□ 1.14
CTDSP1-215ENST00000498160 UTP14AQ9BVJ6 771 aaKnown RBP22.15■■□□□ 1.14
CTDSP1-215ENST00000498160 ATP5J2-PTCD1G3V325 749 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms