RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 MTHFSDQ2M296 383 aaKnown RBP17.19■□□□□ 0.34
TRIM27-207ENST00000498117 TIMELESSQ9UNS1 1208 aa17.19■□□□□ 0.34
TRIM27-207ENST00000498117 SCN4AP35499 1836 aa17.19■□□□□ 0.34
TRIM27-207ENST00000498117 EPHX2P34913 555 aa17.18■□□□□ 0.34
TRIM27-207ENST00000498117 CCDC93Q567U6 631 aa17.18■□□□□ 0.34
TRIM27-207ENST00000498117 PNMA8AQ86V59 439 aaPredicted RBP17.18■□□□□ 0.34
TRIM27-207ENST00000498117 KNSTRNQ9Y448 316 aa17.18■□□□□ 0.34
TRIM27-207ENST00000498117 CNTROBQ8N137 903 aa17.17■□□□□ 0.34
TRIM27-207ENST00000498117 C7orf43Q8WVR3 580 aa17.17■□□□□ 0.34
TRIM27-207ENST00000498117 ZNF496Q96IT1 587 aaPredicted RBP17.17■□□□□ 0.34
TRIM27-207ENST00000498117 WDR33Q9C0J8 1336 aaKnown RBP17.17■□□□□ 0.34
TRIM27-207ENST00000498117 SLX4Q8IY92 1834 aa17.17■□□□□ 0.34
TRIM27-207ENST00000498117 HEG1Q9ULI3 1381 aa17.16■□□□□ 0.34
TRIM27-207ENST00000498117 ZNF790Q6PG37 636 aa17.16■□□□□ 0.34
TRIM27-207ENST00000498117 CAMTA2O94983 1202 aa17.15■□□□□ 0.34
TRIM27-207ENST00000498117 FKBP4Q02790 459 aaKnown RBP eCLIP17.15■□□□□ 0.34
TRIM27-207ENST00000498117 TEFQ10587 303 aa17.15■□□□□ 0.34
TRIM27-207ENST00000498117 ZNF277Q9NRM2 450 aaPredicted RBP17.15■□□□□ 0.34
TRIM27-207ENST00000498117 ABT1Q9ULW3 272 aaKnown RBP17.15■□□□□ 0.34
TRIM27-207ENST00000498117 COL11A2P13942 1736 aaPredicted RBP17.15■□□□□ 0.34
TRIM27-207ENST00000498117 A1BGP04217 495 aa17.14■□□□□ 0.33
TRIM27-207ENST00000498117 NPR1P16066 1061 aa17.14■□□□□ 0.33
TRIM27-207ENST00000498117 MLLT1Q03111 559 aaPredicted RBP17.14■□□□□ 0.33
TRIM27-207ENST00000498117 MAP1SQ66K74 1059 aaPredicted RBP17.14■□□□□ 0.33
TRIM27-207ENST00000498117 RTKN2Q8IZC4 609 aa17.14■□□□□ 0.33
TRIM27-207ENST00000498117 PCDH10Q9P2E7 1040 aa17.14■□□□□ 0.33
TRIM27-207ENST00000498117 ZNF541Q9H0D2 1346 aa17.14■□□□□ 0.33
TRIM27-207ENST00000498117 VIRMAQ69YN4 1812 aaKnown RBP17.14■□□□□ 0.33
TRIM27-207ENST00000498117 EIF4G2P78344 907 aaKnown RBP eCLIP17.13■□□□□ 0.33
TRIM27-207ENST00000498117 NBPF5PQ86XG9 351 aaPredicted RBP17.13■□□□□ 0.33
TRIM27-207ENST00000498117 DZIP3Q86Y13 1208 aaKnown RBP17.13■□□□□ 0.33
TRIM27-207ENST00000498117 FMNL2Q96PY5 1086 aa17.13■□□□□ 0.33
TRIM27-207ENST00000498117 BEGAINQ9BUH8 593 aa17.13■□□□□ 0.33
TRIM27-207ENST00000498117 UBR2Q8IWV8 1755 aa17.12■□□□□ 0.33
TRIM27-207ENST00000498117 CCDC85CA6NKD9 419 aa17.12■□□□□ 0.33
TRIM27-207ENST00000498117 RGS19P49795 217 aa17.12■□□□□ 0.33
TRIM27-207ENST00000498117 CLEC4GQ6UXB4 293 aa17.12■□□□□ 0.33
TRIM27-207ENST00000498117 SCN7AQ01118 1682 aa17.11■□□□□ 0.33
TRIM27-207ENST00000498117 KLRG2A4D1S0 409 aaPredicted RBP17.11■□□□□ 0.33
TRIM27-207ENST00000498117 FZD9O00144 591 aa17.11■□□□□ 0.33
TRIM27-207ENST00000498117 DIAPH1O60610 1272 aaKnown RBP17.11■□□□□ 0.33
TRIM27-207ENST00000498117 ECE1P42892 770 aa17.11■□□□□ 0.33
TRIM27-207ENST00000498117 GPC2Q8N158 579 aa17.11■□□□□ 0.33
TRIM27-207ENST00000498117 IL17REQ8NFR9 667 aa17.11■□□□□ 0.33
TRIM27-207ENST00000498117 DDX21Q9NR30 783 aaKnown RBP eCLIP17.11■□□□□ 0.33
TRIM27-207ENST00000498117 RNF123Q5XPI4 1314 aa17.11■□□□□ 0.33
TRIM27-207ENST00000498117 GNAT3A8MTJ3 354 aa17.1■□□□□ 0.33
TRIM27-207ENST00000498117 IARSP41252 1262 aaKnown RBP17.1■□□□□ 0.33
TRIM27-207ENST00000498117 TPTE2Q6XPS3 522 aa17.1■□□□□ 0.33
TRIM27-207ENST00000498117 ZNF652Q9Y2D9 606 aa17.1■□□□□ 0.33
TRIM27-207ENST00000498117 HSPA5P11021 654 aaKnown RBP17.09■□□□□ 0.33
TRIM27-207ENST00000498117 ALDH1B1P30837 517 aa17.09■□□□□ 0.33
TRIM27-207ENST00000498117 SYNE4Q8N205 404 aa17.09■□□□□ 0.33
TRIM27-207ENST00000498117 GAS2L2Q8NHY3 880 aa17.09■□□□□ 0.33
TRIM27-207ENST00000498117 JDP2Q8WYK2 163 aa17.09■□□□□ 0.33
TRIM27-207ENST00000498117 ARFGEF2Q9Y6D5 1785 aa17.09■□□□□ 0.33
TRIM27-207ENST00000498117 CACNA1SQ13698 1873 aa17.08■□□□□ 0.33
TRIM27-207ENST00000498117 AMER1Q5JTC6 1135 aaPredicted RBP17.08■□□□□ 0.32
TRIM27-207ENST00000498117 PAXIP1Q6ZW49 1069 aaPredicted RBP17.08■□□□□ 0.32
TRIM27-207ENST00000498117 CAPNS2Q96L46 248 aa17.08■□□□□ 0.32
TRIM27-207ENST00000498117 GPR101Q96P66 508 aaPredicted RBP17.08■□□□□ 0.32
TRIM27-207ENST00000498117 ADAMTSL1Q8N6G6 1762 aa17.07■□□□□ 0.32
TRIM27-207ENST00000498117 LMOD1P29536 600 aaPredicted RBP17.07■□□□□ 0.32
TRIM27-207ENST00000498117 OLFM4Q6UX06 510 aa17.07■□□□□ 0.32
TRIM27-207ENST00000498117 EIF6P56537 245 aaKnown RBP17.06■□□□□ 0.32
TRIM27-207ENST00000498117 PSMD1Q99460 953 aa17.06■□□□□ 0.32
TRIM27-207ENST00000498117 USP16Q9Y5T5 823 aa17.06■□□□□ 0.32
TRIM27-207ENST00000498117 BTBD11A6QL63 1104 aa17.05■□□□□ 0.32
TRIM27-207ENST00000498117 RGL2O15211 777 aa17.05■□□□□ 0.32
TRIM27-207ENST00000498117 GRM1Q13255 1194 aa17.05■□□□□ 0.32
TRIM27-207ENST00000498117 CYP4F22Q6NT55 531 aa17.05■□□□□ 0.32
TRIM27-207ENST00000498117 NIP7Q9Y221 180 aaKnown RBP eCLIP17.05■□□□□ 0.32
TRIM27-207ENST00000498117 GJA3Q9Y6H8 435 aa17.05■□□□□ 0.32
TRIM27-207ENST00000498117 MAP2K2P36507 400 aa17.04■□□□□ 0.32
TRIM27-207ENST00000498117 CC2D2BQ6DHV5 1058 aa17.04■□□□□ 0.32
TRIM27-207ENST00000498117 KCNQ3O43525 872 aa17.03■□□□□ 0.32
TRIM27-207ENST00000498117 GTF2E1P29083 439 aaPredicted RBP17.03■□□□□ 0.32
TRIM27-207ENST00000498117 PIP4K2AP48426 406 aaPredicted RBP17.03■□□□□ 0.32
TRIM27-207ENST00000498117 FAM177BA6PVY3 158 aa17.02■□□□□ 0.32
TRIM27-207ENST00000498117 U2SURPO15042 1029 aaKnown RBP17.02■□□□□ 0.32
TRIM27-207ENST00000498117 CA12O43570 354 aa17.02■□□□□ 0.32
TRIM27-207ENST00000498117 CST9Q5W186 159 aa17.02■□□□□ 0.32
TRIM27-207ENST00000498117 USP50Q70EL3 339 aaPredicted RBP17.02■□□□□ 0.32
TRIM27-207ENST00000498117 TLL2Q9Y6L7 1015 aa17.02■□□□□ 0.32
TRIM27-207ENST00000498117 SNRPA1P09661 255 aaKnown RBP17.01■□□□□ 0.31
TRIM27-207ENST00000498117 EPS15P42566 896 aa17.01■□□□□ 0.31
TRIM27-207ENST00000498117 FMR1Q06787 632 aaKnown RBP eCLIP17.01■□□□□ 0.314e-9■■■■■ 38.5
TRIM27-207ENST00000498117 GRIPAP1Q4V328 841 aa17.01■□□□□ 0.31
TRIM27-207ENST00000498117 CFAP44Q96MT7 982 aa17.01■□□□□ 0.31
TRIM27-207ENST00000498117 BCORQ6W2J9 1755 aa17.01■□□□□ 0.31
TRIM27-207ENST00000498117 CEMIPQ8WUJ3 1361 aa17.01■□□□□ 0.31
TRIM27-207ENST00000498117 SCNN1DP51172 638 aa17■□□□□ 0.31
TRIM27-207ENST00000498117 TSKSQ9UJT2 592 aa17■□□□□ 0.31
TRIM27-207ENST00000498117 PRAMEF22A3QJZ6 481 aa16.99■□□□□ 0.31
TRIM27-207ENST00000498117 LARGE2Q8N3Y3 721 aa16.99■□□□□ 0.31
TRIM27-207ENST00000498117 MCOLN1Q9GZU1 580 aa16.99■□□□□ 0.31
TRIM27-207ENST00000498117 TRAF5O00463 557 aa16.98■□□□□ 0.31
TRIM27-207ENST00000498117 AOC2O75106 756 aa16.98■□□□□ 0.31
TRIM27-207ENST00000498117 CRY2Q49AN0 593 aa16.98■□□□□ 0.31
TRIM27-207ENST00000498117 NYXQ9GZU5 481 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms