RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 TAF7Q15545 349 aaPredicted RBP24.67■■□□□ 1.54
PRKCB-209ENST00000498058 CNBD1Q8NA66 436 aa24.67■■□□□ 1.54
PRKCB-209ENST00000498058 KDM3BQ7LBC6 1761 aa24.66■■□□□ 1.54
PRKCB-209ENST00000498058 ZC3H4Q9UPT8 1303 aaKnown RBP24.65■■□□□ 1.54
PRKCB-209ENST00000498058 DICER1Q9UPY3 1922 aaKnown RBP24.65■■□□□ 1.54
PRKCB-209ENST00000498058 GLTPD2A6NH11 291 aa24.65■■□□□ 1.54
PRKCB-209ENST00000498058 NPM2Q86SE8 214 aaKnown RBP24.65■■□□□ 1.54
PRKCB-209ENST00000498058 C16orf71Q8IYS4 520 aaPredicted RBP24.65■■□□□ 1.54
PRKCB-209ENST00000498058 PDZRN3Q9UPQ7 1066 aa24.65■■□□□ 1.54
PRKCB-209ENST00000498058 LAMB4A4D0S4 1761 aa24.65■■□□□ 1.54
PRKCB-209ENST00000498058 SRGNP10124 158 aa24.64■■□□□ 1.54
PRKCB-209ENST00000498058 THUMPD2Q9BTF0 503 aaKnown RBP24.64■■□□□ 1.54
PRKCB-209ENST00000498058 ARFGEF2Q9Y6D5 1785 aa24.64■■□□□ 1.53
PRKCB-209ENST00000498058 POTECB2RU33 542 aa24.63■■□□□ 1.53
PRKCB-209ENST00000498058 CLEC4GQ6UXB4 293 aa24.63■■□□□ 1.53
PRKCB-209ENST00000498058 FSTL1Q12841 308 aa24.62■■□□□ 1.53
PRKCB-209ENST00000498058 HLFQ16534 295 aa24.62■■□□□ 1.53
PRKCB-209ENST00000498058 ST5P78524 1137 aa24.61■■□□□ 1.53
PRKCB-209ENST00000498058 STYK1Q6J9G0 422 aa24.61■■□□□ 1.53
PRKCB-209ENST00000498058 NBPF5PQ86XG9 351 aaPredicted RBP24.61■■□□□ 1.53
PRKCB-209ENST00000498058 NPHP1O15259 732 aa24.6■■□□□ 1.53
PRKCB-209ENST00000498058 PRPF40BQ6NWY9 871 aaKnown RBP24.6■■□□□ 1.53
PRKCB-209ENST00000498058 NFE2L2Q16236 605 aa24.59■■□□□ 1.53
PRKCB-209ENST00000498058 CNKSR1Q969H4 720 aa24.59■■□□□ 1.53
PRKCB-209ENST00000498058 MASTLQ96GX5 879 aa24.59■■□□□ 1.53
PRKCB-209ENST00000498058 NIP7Q9Y221 180 aaKnown RBP eCLIP24.59■■□□□ 1.53
PRKCB-209ENST00000498058 EIF4A1P60842 406 aaKnown RBP24.58■■□□□ 1.53
PRKCB-209ENST00000498058 C7orf43Q8WVR3 580 aa24.58■■□□□ 1.53
PRKCB-209ENST00000498058 NUP98P52948 1817 aa24.57■■□□□ 1.52
PRKCB-209ENST00000498058 KLRG2A4D1S0 409 aaPredicted RBP24.57■■□□□ 1.52
PRKCB-209ENST00000498058 FAM177BA6PVY3 158 aa24.57■■□□□ 1.52
PRKCB-209ENST00000498058 VEGFAP15692 232 aaPredicted RBP24.57■■□□□ 1.52
PRKCB-209ENST00000498058 IFFO2Q5TF58 517 aa24.57■■□□□ 1.52
PRKCB-209ENST00000498058 ZNF652Q9Y2D9 606 aa24.57■■□□□ 1.52
PRKCB-209ENST00000498058 LTBP3Q9NS15 1303 aa24.57■■□□□ 1.52
PRKCB-209ENST00000498058 ERFEQ4G0M1 354 aa24.56■■□□□ 1.52
PRKCB-209ENST00000498058 NGEFQ8N5V2 710 aa24.56■■□□□ 1.52
PRKCB-209ENST00000498058 RGL2O15211 777 aa24.55■■□□□ 1.52
PRKCB-209ENST00000498058 OLFM4Q6UX06 510 aa24.55■■□□□ 1.52
PRKCB-209ENST00000498058 SMC1BQ8NDV3 1235 aa24.55■■□□□ 1.52
PRKCB-209ENST00000498058 TAOK3Q9H2K8 898 aa24.55■■□□□ 1.52
PRKCB-209ENST00000498058 TTLL7Q6ZT98 887 aa24.54■■□□□ 1.52
PRKCB-209ENST00000498058 PNISRQ8TF01 805 aaKnown RBP24.54■■□□□ 1.52
PRKCB-209ENST00000498058 NEFMP07197 916 aa24.53■■□□□ 1.52
PRKCB-209ENST00000498058 TPTE2Q6XPS3 522 aa24.53■■□□□ 1.52
PRKCB-209ENST00000498058 NPR1P16066 1061 aa24.52■■□□□ 1.52
PRKCB-209ENST00000498058 KLRG1Q96E93 195 aa24.52■■□□□ 1.52
PRKCB-209ENST00000498058 RRP7AQ9Y3A4 280 aaKnown RBP24.52■■□□□ 1.52
PRKCB-209ENST00000498058 ABCC12Q96J65 1359 aa24.51■■□□□ 1.51
PRKCB-209ENST00000498058 DDNO94850 711 aaPredicted RBP24.5■■□□□ 1.51
PRKCB-209ENST00000498058 DPY19L2Q6NUT2 758 aa24.5■■□□□ 1.51
PRKCB-209ENST00000498058 MAP3K15Q6ZN16 1313 aa24.5■■□□□ 1.51
PRKCB-209ENST00000498058 MYL6BP14649 208 aa24.49■■□□□ 1.51
PRKCB-209ENST00000498058 NUTM1Q86Y26 1132 aa24.49■■□□□ 1.51
PRKCB-209ENST00000498058 ERVV-1B6SEH8 477 aa24.48■■□□□ 1.51
PRKCB-209ENST00000498058 CCDC93Q567U6 631 aa24.48■■□□□ 1.51
PRKCB-209ENST00000498058 SOGA3Q5TF21 947 aa24.48■■□□□ 1.51
PRKCB-209ENST00000498058 UBN2Q6ZU65 1347 aa24.48■■□□□ 1.51
PRKCB-209ENST00000498058 MAPK8IP3Q9UPT6 1336 aa24.48■■□□□ 1.51
PRKCB-209ENST00000498058 POTEIP0CG38 1075 aa24.47■■□□□ 1.51
PRKCB-209ENST00000498058 POTEJP0CG39 1038 aa24.47■■□□□ 1.51
PRKCB-209ENST00000498058 LRP10Q7Z4F1 713 aa24.47■■□□□ 1.51
PRKCB-209ENST00000498058 JMYQ8N9B5 988 aa24.47■■□□□ 1.51
PRKCB-209ENST00000498058 ZBTB3Q9H5J0 574 aa24.47■■□□□ 1.51
PRKCB-209ENST00000498058 SNED1Q8TER0 1413 aa24.46■■□□□ 1.51
PRKCB-209ENST00000498058 GPTP24298 496 aa24.46■■□□□ 1.51
PRKCB-209ENST00000498058 SLC51AQ86UW1 340 aa24.46■■□□□ 1.51
PRKCB-209ENST00000498058 RIPK4P57078 832 aa24.45■■□□□ 1.5
PRKCB-209ENST00000498058 FKBP4Q02790 459 aaKnown RBP eCLIP24.45■■□□□ 1.5
PRKCB-209ENST00000498058 PDIA6Q15084 440 aa24.45■■□□□ 1.5
PRKCB-209ENST00000498058 PNNQ9H307 717 aaKnown RBP24.45■■□□□ 1.5
PRKCB-209ENST00000498058 ZNF277Q9NRM2 450 aaPredicted RBP24.45■■□□□ 1.5
PRKCB-209ENST00000498058 RALBP1Q15311 655 aa24.44■■□□□ 1.5
PRKCB-209ENST00000498058 CRY2Q49AN0 593 aa24.44■■□□□ 1.5
PRKCB-209ENST00000498058 SUSD4Q5VX71 490 aa24.44■■□□□ 1.5
PRKCB-209ENST00000498058 TSPYL4Q9UJ04 414 aa24.44■■□□□ 1.5
PRKCB-209ENST00000498058 GTF2E1P29083 439 aaPredicted RBP24.43■■□□□ 1.5
PRKCB-209ENST00000498058 TMPOP42166 694 aaKnown RBP24.43■■□□□ 1.5
PRKCB-209ENST00000498058 DDX10Q13206 875 aaKnown RBP24.43■■□□□ 1.5
PRKCB-209ENST00000498058 PROSER3Q2NL68 480 aa24.43■■□□□ 1.5
PRKCB-209ENST00000498058 ZNF34Q8IZ26 560 aa24.43■■□□□ 1.5
PRKCB-209ENST00000498058 ZNF541Q9H0D2 1346 aa24.42■■□□□ 1.5
PRKCB-209ENST00000498058 ANXA1P04083 346 aa24.42■■□□□ 1.5
PRKCB-209ENST00000498058 KIF6Q6ZMV9 814 aa24.42■■□□□ 1.5
PRKCB-209ENST00000498058 C3orf67Q6ZVT6 689 aa24.42■■□□□ 1.5
PRKCB-209ENST00000498058 NYXQ9GZU5 481 aa24.41■■□□□ 1.5
PRKCB-209ENST00000498058 ERBB4Q15303 1308 aa24.4■■□□□ 1.5
PRKCB-209ENST00000498058 NTSR2O95665 410 aa24.4■■□□□ 1.5
PRKCB-209ENST00000498058 EIF2S2P20042 333 aaKnown RBP24.4■■□□□ 1.5
PRKCB-209ENST00000498058 ALDH1B1P30837 517 aa24.4■■□□□ 1.5
PRKCB-209ENST00000498058 GIGYF2Q6Y7W6 1299 aaKnown RBP24.4■■□□□ 1.5
PRKCB-209ENST00000498058 CCDC146Q8IYE0 955 aa24.4■■□□□ 1.5
PRKCB-209ENST00000498058 COL4A5P29400 1685 aa24.4■■□□□ 1.5
PRKCB-209ENST00000498058 RTKN2Q8IZC4 609 aa24.39■■□□□ 1.49
PRKCB-209ENST00000498058 SYNE4Q8N205 404 aa24.39■■□□□ 1.49
PRKCB-209ENST00000498058 L3MBTL3Q96JM7 780 aaPredicted RBP24.39■■□□□ 1.49
PRKCB-209ENST00000498058 SCN4AP35499 1836 aa24.39■■□□□ 1.49
PRKCB-209ENST00000498058 IBTKQ9P2D0 1353 aaPredicted RBP24.39■■□□□ 1.49
PRKCB-209ENST00000498058 PCNTO95613 3336 aa24.38■■□□□ 1.49
PRKCB-209ENST00000498058 RIC1Q4ADV7 1423 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms