RNA–Protein interactions for RNA: ENST00000497933.1

LRRC55-201, Transcript of leucine rich repeat containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC55, Length 5,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55-201ENST00000497933 CASTP20810 708 aaKnown RBP13.08□□□□□ -0.32
LRRC55-201ENST00000497933 FLIIQ13045 1269 aa13.08□□□□□ -0.32
LRRC55-201ENST00000497933 TRMT1Q9NXH9 659 aaKnown RBP13.07□□□□□ -0.32
LRRC55-201ENST00000497933 KIF4BQ2VIQ3 1234 aa13.07□□□□□ -0.32
LRRC55-201ENST00000497933 TTC21AQ8NDW8 1320 aa13.07□□□□□ -0.32
LRRC55-201ENST00000497933 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
LRRC55-201ENST00000497933 TOP1P11387 765 aaKnown RBP13.07□□□□□ -0.32
LRRC55-201ENST00000497933 IRX3P78415 501 aaPredicted RBP13.07□□□□□ -0.32
LRRC55-201ENST00000497933 TRMT112Q9UI30 125 aaKnown RBP13.07□□□□□ -0.32
LRRC55-201ENST00000497933 PLCH2O75038 1416 aa13.07□□□□□ -0.32
LRRC55-201ENST00000497933 GOLGA6L9A6NEM1 432 aa13.07□□□□□ -0.32
LRRC55-201ENST00000497933 SLC5A1P13866 664 aa13.07□□□□□ -0.32
LRRC55-201ENST00000497933 DDX19AQ9NUU7 478 aaKnown RBP13.07□□□□□ -0.32
LRRC55-201ENST00000497933 MAP2K1Q02750 393 aaPredicted RBP13.06□□□□□ -0.32
LRRC55-201ENST00000497933 BIVM-ERCC5R4GMW8 1640 aa13.06□□□□□ -0.32
LRRC55-201ENST00000497933 ACEP12821 1306 aa13.06□□□□□ -0.32
LRRC55-201ENST00000497933 ANKRD18BA2A2Z9 1011 aa13.06□□□□□ -0.32
LRRC55-201ENST00000497933 CAVIN2O95810 425 aa13.06□□□□□ -0.32
LRRC55-201ENST00000497933 CCDC91Q7Z6B0 441 aa13.06□□□□□ -0.32
LRRC55-201ENST00000497933 LMAN1P49257 510 aa13.06□□□□□ -0.32
LRRC55-201ENST00000497933 ZHX3Q9H4I2 956 aa13.06□□□□□ -0.32
LRRC55-201ENST00000497933 NAPBQ9H115 298 aa13.06□□□□□ -0.32
LRRC55-201ENST00000497933 BOLA2Q9H3K6 86 aa13.06□□□□□ -0.32
LRRC55-201ENST00000497933 A0A087WZG4 1122 aa13.06□□□□□ -0.32
LRRC55-201ENST00000497933 SLF2Q8IX21 1173 aa13.05□□□□□ -0.32
LRRC55-201ENST00000497933 ZNF830Q96NB3 372 aaPredicted RBP13.05□□□□□ -0.32
LRRC55-201ENST00000497933 CETN2P41208 172 aa13.05□□□□□ -0.32
LRRC55-201ENST00000497933 RNF41Q9H4P4 317 aaPredicted RBP13.05□□□□□ -0.32
LRRC55-201ENST00000497933 TEX14Q8IWB6 1497 aa13.05□□□□□ -0.32
LRRC55-201ENST00000497933 CCDC171Q6TFL3 1326 aa13.05□□□□□ -0.32
LRRC55-201ENST00000497933 USP5P45974 858 aa13.05□□□□□ -0.32
LRRC55-201ENST00000497933 SNW1Q13573 536 aaKnown RBP13.05□□□□□ -0.32
LRRC55-201ENST00000497933 F6X3S4 739 aa13.04□□□□□ -0.32
LRRC55-201ENST00000497933 TRIM27P14373 513 aa13.04□□□□□ -0.32
LRRC55-201ENST00000497933 FKBP15Q5T1M5 1219 aa13.04□□□□□ -0.32
LRRC55-201ENST00000497933 PRPF40BQ6NWY9 871 aaKnown RBP13.04□□□□□ -0.32
LRRC55-201ENST00000497933 NGLY1Q96IV0 654 aa13.04□□□□□ -0.32
LRRC55-201ENST00000497933 PIK3R4Q99570 1358 aa13.04□□□□□ -0.32
LRRC55-201ENST00000497933 ADAMTS2O95450 1211 aa13.04□□□□□ -0.32
LRRC55-201ENST00000497933 BMP2KLQ5H9B9 411 aa13.04□□□□□ -0.32
LRRC55-201ENST00000497933 DHX37Q8IY37 1157 aaKnown RBP13.04□□□□□ -0.32
LRRC55-201ENST00000497933 IPO4Q8TEX9 1081 aaKnown RBP13.04□□□□□ -0.32
LRRC55-201ENST00000497933 PAFAH1B1P43034 410 aa13.04□□□□□ -0.32
LRRC55-201ENST00000497933 NUP160Q12769 1436 aa13.04□□□□□ -0.32
LRRC55-201ENST00000497933 POLR3DP05423 398 aaPredicted RBP13.03□□□□□ -0.32
LRRC55-201ENST00000497933 ZNF76P36508 570 aa13.03□□□□□ -0.32
LRRC55-201ENST00000497933 TBC1D9Q6ZT07 1266 aa13.03□□□□□ -0.32
LRRC55-201ENST00000497933 FERMT3Q86UX7 667 aa13.03□□□□□ -0.32
LRRC55-201ENST00000497933 PHAXQ9H814 394 aaKnown RBP13.03□□□□□ -0.32
LRRC55-201ENST00000497933 MKNK2Q9HBH9 465 aa13.03□□□□□ -0.32
LRRC55-201ENST00000497933 DESP17661 470 aa13.03□□□□□ -0.32
LRRC55-201ENST00000497933 IQCA1Q86XH1 822 aa13.03□□□□□ -0.32
LRRC55-201ENST00000497933 DZIP1Q86YF9 867 aaKnown RBP13.03□□□□□ -0.32
LRRC55-201ENST00000497933 SMARCC1Q92922 1105 aaPredicted RBP13.03□□□□□ -0.32
LRRC55-201ENST00000497933 PUS7Q96PZ0 661 aaKnown RBP13.03□□□□□ -0.32
LRRC55-201ENST00000497933 ECHDC1Q9NTX5 307 aa13.03□□□□□ -0.32
LRRC55-201ENST00000497933 SEPT11Q9NVA2 429 aaKnown RBP13.03□□□□□ -0.32
LRRC55-201ENST00000497933 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.03□□□□□ -0.32
LRRC55-201ENST00000497933 DUOX2Q9NRD8 1548 aa13.03□□□□□ -0.32
LRRC55-201ENST00000497933 SMC1AQ14683 1233 aaKnown RBP13.03□□□□□ -0.32
LRRC55-201ENST00000497933 CKAP2LQ8IYA6 745 aa13.03□□□□□ -0.32
LRRC55-201ENST00000497933 ARHGAP45Q92619 1136 aa13.03□□□□□ -0.32
LRRC55-201ENST00000497933 GDPD2Q9HCC8 539 aa13.03□□□□□ -0.32
LRRC55-201ENST00000497933 UHRF1BP1LA0JNW5 1464 aa13.03□□□□□ -0.32
LRRC55-201ENST00000497933 RALGAPBQ86X10 1494 aa13.03□□□□□ -0.32
LRRC55-201ENST00000497933 USO1O60763 962 aaKnown RBP13.03□□□□□ -0.32
LRRC55-201ENST00000497933 CTCFLQ8NI51 663 aaPredicted RBP13.03□□□□□ -0.32
LRRC55-201ENST00000497933 OGFRQ9NZT2 677 aa13.03□□□□□ -0.32
LRRC55-201ENST00000497933 ANKIB1Q9P2G1 1089 aa13.03□□□□□ -0.32
LRRC55-201ENST00000497933 SEC63Q9UGP8 760 aaKnown RBP13.03□□□□□ -0.32
LRRC55-201ENST00000497933 SMARCA5O60264 1052 aaPredicted RBP13.03□□□□□ -0.32
LRRC55-201ENST00000497933 SNRPA1P09661 255 aaKnown RBP13.03□□□□□ -0.32
LRRC55-201ENST00000497933 SNX21Q969T3 373 aa13.03□□□□□ -0.32
LRRC55-201ENST00000497933 EVI5LQ96CN4 794 aa13.03□□□□□ -0.32
LRRC55-201ENST00000497933 CDC5LQ99459 802 aaKnown RBP13.03□□□□□ -0.32
LRRC55-201ENST00000497933 SPINK5Q9NQ38 1064 aaPredicted RBP13.03□□□□□ -0.32
LRRC55-201ENST00000497933 RBM25P49756 843 aaKnown RBP13.02□□□□□ -0.32
LRRC55-201ENST00000497933 UBE2HP62256 183 aa13.02□□□□□ -0.32
LRRC55-201ENST00000497933 LUZP1Q86V48 1076 aa13.02□□□□□ -0.32
LRRC55-201ENST00000497933 LIMCH1Q9UPQ0 1083 aa13.02□□□□□ -0.32
LRRC55-201ENST00000497933 PPP1R12BO60237 982 aaPredicted RBP13.02□□□□□ -0.33
LRRC55-201ENST00000497933 TTF1Q15361 905 aaPredicted RBP13.02□□□□□ -0.33
LRRC55-201ENST00000497933 VPS36Q86VN1 386 aa13.02□□□□□ -0.33
LRRC55-201ENST00000497933 ANKRD24Q8TF21 1146 aa13.02□□□□□ -0.33
LRRC55-201ENST00000497933 FEZ1Q99689 392 aa13.02□□□□□ -0.33
LRRC55-201ENST00000497933 CWC25Q9NXE8 425 aaPredicted RBP13.02□□□□□ -0.33
LRRC55-201ENST00000497933 GCOM1H8Y6P7 765 aaPredicted RBP13.02□□□□□ -0.33
LRRC55-201ENST00000497933 KIF20AO95235 890 aa13.02□□□□□ -0.33
LRRC55-201ENST00000497933 SSBP05455 408 aaKnown RBP eCLIP13.02□□□□□ -0.33
LRRC55-201ENST00000497933 IVLP07476 585 aa13.02□□□□□ -0.33
LRRC55-201ENST00000497933 MYZAPP0CAP1 466 aa13.02□□□□□ -0.33
LRRC55-201ENST00000497933 HCLS1P14317 486 aaPredicted RBP13.02□□□□□ -0.33
LRRC55-201ENST00000497933 DISP3Q9P2K9 1392 aa13.02□□□□□ -0.33
LRRC55-201ENST00000497933 MINDY4BA8MYZ0 360 aa13.02□□□□□ -0.33
LRRC55-201ENST00000497933 CRACR2BQ8N4Y2 399 aaPredicted RBP13.02□□□□□ -0.33
LRRC55-201ENST00000497933 ATP10BO94823 1461 aa13.01□□□□□ -0.33
LRRC55-201ENST00000497933 GOLGA6L10A0A0M3HER8 536 aa13.01□□□□□ -0.33
LRRC55-201ENST00000497933 ZNF213O14771 459 aa13.01□□□□□ -0.33
LRRC55-201ENST00000497933 FGFR1OPO95684 399 aaKnown RBP13.01□□□□□ -0.33
LRRC55-201ENST00000497933 A2MP01023 1474 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms