RNA–Protein interactions for RNA: ENST00000497739.1

PTPN3-206, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 3

Gene PTPN3, Length 781 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-206ENST00000497739 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.75□□□□□ -0.37
PTPN3-206ENST00000497739 CNTNAP4Q9C0A0 1308 aa12.74□□□□□ -0.37
PTPN3-206ENST00000497739 DIAPH1O60610 1272 aaKnown RBP12.74□□□□□ -0.37
PTPN3-206ENST00000497739 C1orf141Q5JVX7 400 aa12.74□□□□□ -0.37
PTPN3-206ENST00000497739 COL13A1Q5TAT6 717 aaPredicted RBP12.74□□□□□ -0.37
PTPN3-206ENST00000497739 C3orf67Q6ZVT6 689 aa12.74□□□□□ -0.37
PTPN3-206ENST00000497739 NLGN1Q8N2Q7 840 aa12.74□□□□□ -0.37
PTPN3-206ENST00000497739 KLRG1Q96E93 195 aa12.74□□□□□ -0.37
PTPN3-206ENST00000497739 GPHNQ9NQX3 736 aaPredicted RBP12.74□□□□□ -0.37
PTPN3-206ENST00000497739 KCPQ6ZWJ8 1503 aa12.73□□□□□ -0.37
PTPN3-206ENST00000497739 KDM6AO15550 1401 aaPredicted RBP12.73□□□□□ -0.37
PTPN3-206ENST00000497739 U2SURPO15042 1029 aaKnown RBP12.73□□□□□ -0.37
PTPN3-206ENST00000497739 PLEKHO1Q53GL0 409 aaPredicted RBP12.73□□□□□ -0.37
PTPN3-206ENST00000497739 ARHGEF1Q92888 912 aaKnown RBP12.73□□□□□ -0.37
PTPN3-206ENST00000497739 NUDCQ9Y266 331 aa12.73□□□□□ -0.37
PTPN3-206ENST00000497739 C2orf72A6NCS6 295 aa12.72□□□□□ -0.37
PTPN3-206ENST00000497739 HSP90AB1P08238 724 aaKnown RBP12.72□□□□□ -0.37
PTPN3-206ENST00000497739 PDE4AP27815 886 aa12.72□□□□□ -0.37
PTPN3-206ENST00000497739 AMOTQ4VCS5 1084 aa12.72□□□□□ -0.37
PTPN3-206ENST00000497739 TRAPPC3LQ5T215 181 aa12.72□□□□□ -0.37
PTPN3-206ENST00000497739 RC3H1Q5TC82 1133 aaKnown RBP12.72□□□□□ -0.37
PTPN3-206ENST00000497739 C9orf131Q5VYM1 1079 aa12.72□□□□□ -0.37
PTPN3-206ENST00000497739 SULT6B1Q6IMI4 303 aa12.72□□□□□ -0.37
PTPN3-206ENST00000497739 ARHGAP27Q6ZUM4 889 aa12.72□□□□□ -0.37
PTPN3-206ENST00000497739 IFNL2Q8IZJ0 200 aa12.72□□□□□ -0.37
PTPN3-206ENST00000497739 DCAF5Q96JK2 942 aa12.72□□□□□ -0.37
PTPN3-206ENST00000497739 RTCBQ9Y3I0 505 aaKnown RBP12.72□□□□□ -0.37
PTPN3-206ENST00000497739 ARFGEF1Q9Y6D6 1849 aa12.72□□□□□ -0.37
PTPN3-206ENST00000497739 ADAMTS7Q9UKP4 1686 aa12.71□□□□□ -0.37
PTPN3-206ENST00000497739 NEFMP07197 916 aa12.71□□□□□ -0.37
PTPN3-206ENST00000497739 DDR1Q08345 913 aa12.71□□□□□ -0.37
PTPN3-206ENST00000497739 FSTL1Q12841 308 aa12.71□□□□□ -0.37
PTPN3-206ENST00000497739 MFSD10Q14728 455 aa12.71□□□□□ -0.37
PTPN3-206ENST00000497739 TPRNQ4KMQ1 711 aa12.71□□□□□ -0.37
PTPN3-206ENST00000497739 CCDC87Q9NVE4 849 aa12.71□□□□□ -0.37
PTPN3-206ENST00000497739 RPS6KA4O75676 772 aa12.7□□□□□ -0.38
PTPN3-206ENST00000497739 FCHSD2O94868 740 aa12.7□□□□□ -0.38
PTPN3-206ENST00000497739 DDX10Q13206 875 aaKnown RBP12.7□□□□□ -0.38
PTPN3-206ENST00000497739 ZNF530Q6P9A1 599 aaPredicted RBP12.7□□□□□ -0.38
PTPN3-206ENST00000497739 SCUBE2Q9NQ36 999 aa12.7□□□□□ -0.38
PTPN3-206ENST00000497739 MYH14Q7Z406 1995 aaKnown RBP12.69□□□□□ -0.38
PTPN3-206ENST00000497739 ERVV-2B6SEH9 535 aa12.69□□□□□ -0.38
PTPN3-206ENST00000497739 USP42Q9H9J4 1324 aaKnown RBP12.68□□□□□ -0.38
PTPN3-206ENST00000497739 TNRC6CQ9HCJ0 1690 aaKnown RBP12.68□□□□□ -0.38
PTPN3-206ENST00000497739 HMOX1P09601 288 aa12.68□□□□□ -0.38
PTPN3-206ENST00000497739 IL13P35225 146 aa12.68□□□□□ -0.38
PTPN3-206ENST00000497739 SRP68Q9UHB9 627 aaKnown RBP12.68□□□□□ -0.38
PTPN3-206ENST00000497739 TJP1Q07157 1748 aa12.68□□□□□ -0.38
PTPN3-206ENST00000497739 VIRMAQ69YN4 1812 aaKnown RBP12.67□□□□□ -0.38
PTPN3-206ENST00000497739 RFC4P35249 363 aa12.67□□□□□ -0.38
PTPN3-206ENST00000497739 LARP6Q9BRS8 491 aaKnown RBP12.67□□□□□ -0.38
PTPN3-206ENST00000497739 PIM2Q9P1W9 311 aa12.67□□□□□ -0.38
PTPN3-206ENST00000497739 PARP3Q9Y6F1 533 aa12.67□□□□□ -0.38
PTPN3-206ENST00000497739 PPP2R1AP30153 589 aa12.66□□□□□ -0.38
PTPN3-206ENST00000497739 CHRNA5P30532 468 aa12.66□□□□□ -0.38
PTPN3-206ENST00000497739 PRELPP51888 382 aa12.66□□□□□ -0.38
PTPN3-206ENST00000497739 FOXK1P85037 733 aa12.66□□□□□ -0.38
PTPN3-206ENST00000497739 RALBP1Q15311 655 aa12.66□□□□□ -0.38
PTPN3-206ENST00000497739 DALRD3Q5D0E6 543 aaKnown RBP12.66□□□□□ -0.38
PTPN3-206ENST00000497739 AEBP1Q8IUX7 1158 aa12.66□□□□□ -0.38
PTPN3-206ENST00000497739 RNF181Q9P0P0 153 aa12.66□□□□□ -0.38
PTPN3-206ENST00000497739 KDM2BQ8NHM5 1336 aa12.65□□□□□ -0.38
PTPN3-206ENST00000497739 POLRMTO00411 1230 aaKnown RBP12.65□□□□□ -0.38
PTPN3-206ENST00000497739 U2AF1L5P0DN76 240 aaPredicted RBP12.65□□□□□ -0.38
PTPN3-206ENST00000497739 CRKLP46109 303 aaKnown RBP12.65□□□□□ -0.38
PTPN3-206ENST00000497739 U2AF1Q01081 240 aaKnown RBP eCLIP12.65□□□□□ -0.38
PTPN3-206ENST00000497739 DSG2Q14126 1118 aa12.65□□□□□ -0.38
PTPN3-206ENST00000497739 SLAIN1Q8ND83 568 aa12.65□□□□□ -0.38
PTPN3-206ENST00000497739 TMC2Q8TDI7 906 aa12.65□□□□□ -0.38
PTPN3-206ENST00000497739 CABP4P57796 275 aa12.64□□□□□ -0.39
PTPN3-206ENST00000497739 INTS5Q6P9B9 1019 aaKnown RBP12.64□□□□□ -0.39
PTPN3-206ENST00000497739 RRAGCQ9HB90 399 aa12.64□□□□□ -0.39
PTPN3-206ENST00000497739 SCN11AQ9UI33 1791 aa12.64□□□□□ -0.39
PTPN3-206ENST00000497739 ZC3H4Q9UPT8 1303 aaKnown RBP12.63□□□□□ -0.39
PTPN3-206ENST00000497739 TM4SF1P30408 202 aa12.63□□□□□ -0.39
PTPN3-206ENST00000497739 RASSF7Q02833 373 aa12.63□□□□□ -0.39
PTPN3-206ENST00000497739 C16orf71Q8IYS4 520 aaPredicted RBP12.63□□□□□ -0.39
PTPN3-206ENST00000497739 SMC1BQ8NDV3 1235 aa12.63□□□□□ -0.39
PTPN3-206ENST00000497739 GAS2L2Q8NHY3 880 aa12.63□□□□□ -0.39
PTPN3-206ENST00000497739 PNNQ9H307 717 aaKnown RBP12.63□□□□□ -0.39
PTPN3-206ENST00000497739 SBF1O95248 1867 aa12.63□□□□□ -0.39
PTPN3-206ENST00000497739 NRXN2Q9P2S2 1712 aa12.62□□□□□ -0.39
PTPN3-206ENST00000497739 COL3A1P02461 1466 aaPredicted RBP12.62□□□□□ -0.39
PTPN3-206ENST00000497739 PTCD1O75127 700 aaKnown RBP12.62□□□□□ -0.39
PTPN3-206ENST00000497739 AKAP4Q5JQC9 854 aa12.62□□□□□ -0.39
PTPN3-206ENST00000497739 TNS4Q8IZW8 715 aa12.62□□□□□ -0.39
PTPN3-206ENST00000497739 MRC1P22897 1456 aa12.61□□□□□ -0.39
PTPN3-206ENST00000497739 ZNF316A6NFI3 1004 aaPredicted RBP12.61□□□□□ -0.39
PTPN3-206ENST00000497739 PPP1R15BQ5SWA1 713 aa12.61□□□□□ -0.39
PTPN3-206ENST00000497739 DDX27Q96GQ7 796 aaKnown RBP12.61□□□□□ -0.39
PTPN3-206ENST00000497739 SOS1Q07889 1333 aaPredicted RBP12.61□□□□□ -0.39
PTPN3-206ENST00000497739 MYBBP1AQ9BQG0 1328 aaKnown RBP12.61□□□□□ -0.39
PTPN3-206ENST00000497739 MAPK8IP3Q9UPT6 1336 aa12.61□□□□□ -0.39
PTPN3-206ENST00000497739 PRKAR2BP31323 418 aa12.6□□□□□ -0.39
PTPN3-206ENST00000497739 PLPP6Q8IY26 295 aa12.6□□□□□ -0.39
PTPN3-206ENST00000497739 RTF1Q92541 710 aaKnown RBP12.6□□□□□ -0.39
PTPN3-206ENST00000497739 DLEC1Q9Y238 1755 aa12.6□□□□□ -0.39
PTPN3-206ENST00000497739 CARMIL3Q8ND23 1372 aa12.59□□□□□ -0.39
PTPN3-206ENST00000497739 POTECB2RU33 542 aa12.59□□□□□ -0.39
PTPN3-206ENST00000497739 NFKBIEO00221 500 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms