RNA–Protein interactions for RNA: ENST00000497700.1

ELL3-208, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 3

Gene ELL3, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-208ENST00000497700 CNBD1Q8NA66 436 aa23.9■■□□□ 1.42
ELL3-208ENST00000497700 ARFGEF2Q9Y6D5 1785 aa23.89■■□□□ 1.42
ELL3-208ENST00000497700 NPHP1O15259 732 aa23.89■■□□□ 1.41
ELL3-208ENST00000497700 VEGFAP15692 232 aaPredicted RBP23.89■■□□□ 1.41
ELL3-208ENST00000497700 PPP2R1AP30153 589 aa23.89■■□□□ 1.41
ELL3-208ENST00000497700 SETDB2Q96T68 719 aa23.89■■□□□ 1.41
ELL3-208ENST00000497700 POTECB2RU33 542 aa23.88■■□□□ 1.41
ELL3-208ENST00000497700 NPM2Q86SE8 214 aaKnown RBP23.88■■□□□ 1.41
ELL3-208ENST00000497700 NUDCQ9Y266 331 aa23.86■■□□□ 1.41
ELL3-208ENST00000497700 DLG5Q8TDM6 1919 aa23.86■■□□□ 1.41
ELL3-208ENST00000497700 ERFEQ4G0M1 354 aa23.85■■□□□ 1.41
ELL3-208ENST00000497700 PRPF40BQ6NWY9 871 aaKnown RBP23.85■■□□□ 1.41
ELL3-208ENST00000497700 NBPF26B4DH59 902 aa23.84■■□□□ 1.41
ELL3-208ENST00000497700 SRGNP10124 158 aa23.84■■□□□ 1.41
ELL3-208ENST00000497700 ST5P78524 1137 aa23.84■■□□□ 1.41
ELL3-208ENST00000497700 NBPF10Q6P3W6 841 aaKnown RBP23.84■■□□□ 1.41
ELL3-208ENST00000497700 NBPF15Q8N660 670 aa23.84■■□□□ 1.41
ELL3-208ENST00000497700 JMYQ8N9B5 988 aa23.84■■□□□ 1.41
ELL3-208ENST00000497700 RTF1Q92541 710 aaKnown RBP23.84■■□□□ 1.41
ELL3-208ENST00000497700 SNRPA1P09661 255 aaKnown RBP23.83■■□□□ 1.41
ELL3-208ENST00000497700 TAOK3Q9H2K8 898 aa23.83■■□□□ 1.41
ELL3-208ENST00000497700 MIS18AQ9NYP9 233 aa23.83■■□□□ 1.41
ELL3-208ENST00000497700 PDZRN3Q9UPQ7 1066 aa23.83■■□□□ 1.41
ELL3-208ENST00000497700 LAMB4A4D0S4 1761 aa23.83■■□□□ 1.4
ELL3-208ENST00000497700 FAM177BA6PVY3 158 aa23.82■■□□□ 1.4
ELL3-208ENST00000497700 ANP32CO43423 234 aa23.82■■□□□ 1.4
ELL3-208ENST00000497700 STYK1Q6J9G0 422 aa23.82■■□□□ 1.4
ELL3-208ENST00000497700 NBPF5PQ86XG9 351 aaPredicted RBP23.82■■□□□ 1.4
ELL3-208ENST00000497700 CNKSR1Q969H4 720 aa23.81■■□□□ 1.4
ELL3-208ENST00000497700 PCNTO95613 3336 aa23.8■■□□□ 1.4
ELL3-208ENST00000497700 POTEIP0CG38 1075 aa23.8■■□□□ 1.4
ELL3-208ENST00000497700 POTEJP0CG39 1038 aa23.8■■□□□ 1.4
ELL3-208ENST00000497700 COL13A1Q5TAT6 717 aaPredicted RBP23.8■■□□□ 1.4
ELL3-208ENST00000497700 DPY19L2Q6NUT2 758 aa23.8■■□□□ 1.4
ELL3-208ENST00000497700 MASTLQ96GX5 879 aa23.8■■□□□ 1.4
ELL3-208ENST00000497700 DDNO94850 711 aaPredicted RBP23.79■■□□□ 1.4
ELL3-208ENST00000497700 OLFM4Q6UX06 510 aa23.79■■□□□ 1.4
ELL3-208ENST00000497700 LTBP3Q9NS15 1303 aa23.79■■□□□ 1.4
ELL3-208ENST00000497700 HLFQ16534 295 aa23.78■■□□□ 1.4
ELL3-208ENST00000497700 NIP7Q9Y221 180 aaKnown RBP eCLIP23.78■■□□□ 1.4
ELL3-208ENST00000497700 KDM3BQ7LBC6 1761 aa23.78■■□□□ 1.4
ELL3-208ENST00000497700 ZNF652Q9Y2D9 606 aa23.77■■□□□ 1.4
ELL3-208ENST00000497700 CLEC4GQ6UXB4 293 aa23.76■■□□□ 1.39
ELL3-208ENST00000497700 NGEFQ8N5V2 710 aa23.75■■□□□ 1.39
ELL3-208ENST00000497700 C7orf43Q8WVR3 580 aa23.75■■□□□ 1.39
ELL3-208ENST00000497700 NUP98P52948 1817 aa23.75■■□□□ 1.39
ELL3-208ENST00000497700 TAF7Q15545 349 aaPredicted RBP23.74■■□□□ 1.39
ELL3-208ENST00000497700 THUMPD2Q9BTF0 503 aaKnown RBP23.74■■□□□ 1.39
ELL3-208ENST00000497700 NPR1P16066 1061 aa23.73■■□□□ 1.39
ELL3-208ENST00000497700 HTATSF1O43719 755 aaKnown RBP23.72■■□□□ 1.39
ELL3-208ENST00000497700 CCDC93Q567U6 631 aa23.72■■□□□ 1.39
ELL3-208ENST00000497700 ZNF277Q9NRM2 450 aaPredicted RBP23.72■■□□□ 1.39
ELL3-208ENST00000497700 ABCC12Q96J65 1359 aa23.71■■□□□ 1.39
ELL3-208ENST00000497700 ZNF541Q9H0D2 1346 aa23.71■■□□□ 1.39
ELL3-208ENST00000497700 HSPA1AP0DMV8 641 aaKnown RBP23.71■■□□□ 1.39
ELL3-208ENST00000497700 HSPA1BP0DMV9 641 aaKnown RBP23.71■■□□□ 1.39
ELL3-208ENST00000497700 SOGA3Q5TF21 947 aa23.71■■□□□ 1.39
ELL3-208ENST00000497700 TPTE2Q6XPS3 522 aa23.71■■□□□ 1.39
ELL3-208ENST00000497700 KLRG2A4D1S0 409 aaPredicted RBP23.7■■□□□ 1.38
ELL3-208ENST00000497700 CHADLQ6NUI6 762 aa23.7■■□□□ 1.38
ELL3-208ENST00000497700 PRKRIP1Q9H875 184 aaPredicted RBP23.7■■□□□ 1.38
ELL3-208ENST00000497700 SCN4AP35499 1836 aa23.7■■□□□ 1.38
ELL3-208ENST00000497700 CAPN15O75808 1086 aa23.69■■□□□ 1.38
ELL3-208ENST00000497700 TTLL7Q6ZT98 887 aa23.69■■□□□ 1.38
ELL3-208ENST00000497700 SLC51AQ86UW1 340 aa23.69■■□□□ 1.38
ELL3-208ENST00000497700 NUTM1Q86Y26 1132 aa23.69■■□□□ 1.38
ELL3-208ENST00000497700 FKBP4Q02790 459 aaKnown RBP eCLIP23.68■■□□□ 1.38
ELL3-208ENST00000497700 RRP7AQ9Y3A4 280 aaKnown RBP23.68■■□□□ 1.38
ELL3-208ENST00000497700 PLEKHF1Q96S99 279 aa23.67■■□□□ 1.38
ELL3-208ENST00000497700 MKRN1Q9UHC7 482 aaKnown RBP23.67■■□□□ 1.38
ELL3-208ENST00000497700 CCER2I3L3R5 266 aa23.66■■□□□ 1.38
ELL3-208ENST00000497700 MYL6BP14649 208 aa23.66■■□□□ 1.38
ELL3-208ENST00000497700 GPTP24298 496 aa23.66■■□□□ 1.38
ELL3-208ENST00000497700 GTF2E1P29083 439 aaPredicted RBP23.66■■□□□ 1.38
ELL3-208ENST00000497700 EIF4A1P60842 406 aaKnown RBP23.66■■□□□ 1.38
ELL3-208ENST00000497700 TAF1DQ9H5J8 278 aaPredicted RBP23.65■■□□□ 1.38
ELL3-208ENST00000497700 UBN2Q6ZU65 1347 aa23.64■■□□□ 1.38
ELL3-208ENST00000497700 COL4A5P29400 1685 aa23.64■■□□□ 1.38
ELL3-208ENST00000497700 RGL2O15211 777 aa23.64■■□□□ 1.37
ELL3-208ENST00000497700 TNS4Q8IZW8 715 aa23.64■■□□□ 1.37
ELL3-208ENST00000497700 L3MBTL3Q96JM7 780 aaPredicted RBP23.64■■□□□ 1.37
ELL3-208ENST00000497700 ZBTB3Q9H5J0 574 aa23.64■■□□□ 1.37
ELL3-208ENST00000497700 MAP3K15Q6ZN16 1313 aa23.63■■□□□ 1.37
ELL3-208ENST00000497700 NEFMP07197 916 aa23.63■■□□□ 1.37
ELL3-208ENST00000497700 NFE2L2Q16236 605 aa23.63■■□□□ 1.37
ELL3-208ENST00000497700 EAPPQ56P03 285 aaPredicted RBP23.63■■□□□ 1.37
ELL3-208ENST00000497700 SYNE4Q8N205 404 aa23.63■■□□□ 1.37
ELL3-208ENST00000497700 SNED1Q8TER0 1413 aa23.63■■□□□ 1.37
ELL3-208ENST00000497700 CREBZFQ9NS37 354 aa23.63■■□□□ 1.37
ELL3-208ENST00000497700 IQCA1LA6NCM1 817 aa23.62■■□□□ 1.37
ELL3-208ENST00000497700 ADAMTSL1Q8N6G6 1762 aa23.62■■□□□ 1.37
ELL3-208ENST00000497700 RNF123Q5XPI4 1314 aa23.61■■□□□ 1.37
ELL3-208ENST00000497700 IARSP41252 1262 aaKnown RBP23.61■■□□□ 1.37
ELL3-208ENST00000497700 RALBP1Q15311 655 aa23.61■■□□□ 1.37
ELL3-208ENST00000497700 KIF6Q6ZMV9 814 aa23.61■■□□□ 1.37
ELL3-208ENST00000497700 LDHDQ86WU2 507 aa23.61■■□□□ 1.37
ELL3-208ENST00000497700 RTKN2Q8IZC4 609 aa23.61■■□□□ 1.37
ELL3-208ENST00000497700 PNISRQ8TF01 805 aaKnown RBP23.61■■□□□ 1.37
ELL3-208ENST00000497700 PASKQ96RG2 1323 aa23.6■■□□□ 1.37
ELL3-208ENST00000497700 ERVV-1B6SEH8 477 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms