RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 ABCC3O15438 1527 aa6.87□□□□□ -1.31
PHC3-217ENST00000497658 CD163L1Q9NR16 1453 aa6.87□□□□□ -1.31
PHC3-217ENST00000497658 CPSF1Q10570 1443 aaKnown RBP6.87□□□□□ -1.31
PHC3-217ENST00000497658 HECW2Q9P2P5 1572 aa6.86□□□□□ -1.31
PHC3-217ENST00000497658 HMMRO75330 724 aa6.86□□□□□ -1.31
PHC3-217ENST00000497658 MCCP23508 829 aa6.86□□□□□ -1.31
PHC3-217ENST00000497658 NEXMIFQ5QGS0 1516 aa6.86□□□□□ -1.31
PHC3-217ENST00000497658 PTPRCP08575 1304 aa6.86□□□□□ -1.31
PHC3-217ENST00000497658 DPYSL4O14531 572 aa6.86□□□□□ -1.31
PHC3-217ENST00000497658 TPM3P06753 285 aa6.86□□□□□ -1.31
PHC3-217ENST00000497658 TSPYL6Q8N831 410 aa6.86□□□□□ -1.31
PHC3-217ENST00000497658 TMX3Q96JJ7 454 aa6.86□□□□□ -1.31
PHC3-217ENST00000497658 GTPBP4Q9BZE4 634 aaKnown RBP6.86□□□□□ -1.31
PHC3-217ENST00000497658 RBM27Q9P2N5 1060 aaKnown RBP6.86□□□□□ -1.31
PHC3-217ENST00000497658 ATP10DQ9P241 1426 aa6.86□□□□□ -1.31
PHC3-217ENST00000497658 CAMSAP1Q5T5Y3 1602 aa6.86□□□□□ -1.31
PHC3-217ENST00000497658 AK9Q5TCS8 1911 aa6.85□□□□□ -1.31
PHC3-217ENST00000497658 MLH3Q9UHC1 1453 aa6.85□□□□□ -1.31
PHC3-217ENST00000497658 SMAPO00193 183 aa6.85□□□□□ -1.31
PHC3-217ENST00000497658 NEK4P51957 841 aa6.85□□□□□ -1.31
PHC3-217ENST00000497658 EN1Q05925 392 aaPredicted RBP6.85□□□□□ -1.31
PHC3-217ENST00000497658 DMTNQ08495 405 aa6.85□□□□□ -1.31
PHC3-217ENST00000497658 DNTTIP2Q5QJE6 756 aaKnown RBP6.85□□□□□ -1.31
PHC3-217ENST00000497658 CEP85Q6P2H3 762 aa6.85□□□□□ -1.31
PHC3-217ENST00000497658 DDX12PQ92771 950 aa6.85□□□□□ -1.31
PHC3-217ENST00000497658 SLC52A1Q9NWF4 448 aa6.85□□□□□ -1.31
PHC3-217ENST00000497658 POLKQ9UBT6 870 aa6.85□□□□□ -1.31
PHC3-217ENST00000497658 SSH2Q76I76 1423 aa6.85□□□□□ -1.31
PHC3-217ENST00000497658 WDR33Q9C0J8 1336 aaKnown RBP6.85□□□□□ -1.31
PHC3-217ENST00000497658 PTPRMP28827 1452 aa6.85□□□□□ -1.31
PHC3-217ENST00000497658 KIF20AO95235 890 aa6.85□□□□□ -1.31
PHC3-217ENST00000497658 NOLC1Q14978 699 aaKnown RBP eCLIP6.85□□□□□ -1.31
PHC3-217ENST00000497658 TSR1Q2NL82 804 aaKnown RBP6.85□□□□□ -1.31
PHC3-217ENST00000497658 TMEM87AQ8NBN3 555 aa6.85□□□□□ -1.31
PHC3-217ENST00000497658 NKX2-3Q8TAU0 364 aa6.85□□□□□ -1.31
PHC3-217ENST00000497658 PHACTR3Q96KR7 559 aa6.85□□□□□ -1.31
PHC3-217ENST00000497658 SPTLC3Q9NUV7 552 aa6.85□□□□□ -1.31
PHC3-217ENST00000497658 KIF3AQ9Y496 699 aa6.85□□□□□ -1.31
PHC3-217ENST00000497658 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.85□□□□□ -1.31
PHC3-217ENST00000497658 RTL1A6NKG5 1358 aa6.84□□□□□ -1.31
PHC3-217ENST00000497658 AATKQ6ZMQ8 1374 aa6.84□□□□□ -1.31
PHC3-217ENST00000497658 KIF20BQ96Q89 1820 aa6.84□□□□□ -1.31
PHC3-217ENST00000497658 ATP7BP35670 1465 aa6.84□□□□□ -1.31
PHC3-217ENST00000497658 YTHDC2Q9H6S0 1430 aaKnown RBP6.84□□□□□ -1.31
PHC3-217ENST00000497658 RIMS2Q9UQ26 1411 aa6.84□□□□□ -1.31
PHC3-217ENST00000497658 C16orf71Q8IYS4 520 aaPredicted RBP6.84□□□□□ -1.31
PHC3-217ENST00000497658 C8orf58Q8NAV2 365 aa6.84□□□□□ -1.31
PHC3-217ENST00000497658 DIAPH3Q9NSV4 1193 aa6.84□□□□□ -1.31
PHC3-217ENST00000497658 NSFL1CQ9UNZ2 370 aaKnown RBP6.84□□□□□ -1.31
PHC3-217ENST00000497658 KIAA0232Q92628 1395 aa6.84□□□□□ -1.31
PHC3-217ENST00000497658 CDK12Q9NYV4 1490 aaPredicted RBP6.84□□□□□ -1.32
PHC3-217ENST00000497658 KNDC1Q76NI1 1749 aa6.84□□□□□ -1.32
PHC3-217ENST00000497658 ZSCAN20P17040 1043 aaPredicted RBP6.83□□□□□ -1.32
PHC3-217ENST00000497658 IL13P35225 146 aa6.83□□□□□ -1.32
PHC3-217ENST00000497658 GGCXP38435 758 aa6.83□□□□□ -1.32
PHC3-217ENST00000497658 FKBP5Q13451 457 aaPredicted RBP6.83□□□□□ -1.32
PHC3-217ENST00000497658 CADPS2Q86UW7 1296 aa6.83□□□□□ -1.32
PHC3-217ENST00000497658 RNF214Q8ND24 703 aa6.83□□□□□ -1.32
PHC3-217ENST00000497658 FAM198AQ9UFP1 575 aa6.83□□□□□ -1.32
PHC3-217ENST00000497658 ATP6V1DQ9Y5K8 247 aa6.83□□□□□ -1.32
PHC3-217ENST00000497658 ARHGEF40Q8TER5 1519 aa6.83□□□□□ -1.32
PHC3-217ENST00000497658 ELL2O00472 640 aaPredicted RBP6.83□□□□□ -1.32
PHC3-217ENST00000497658 APLP1P51693 650 aa6.83□□□□□ -1.32
PHC3-217ENST00000497658 PDE1AP54750 535 aa6.83□□□□□ -1.32
PHC3-217ENST00000497658 CHAF1AQ13111 956 aaPredicted RBP6.83□□□□□ -1.32
PHC3-217ENST00000497658 CCDC183Q5T5S1 534 aa6.83□□□□□ -1.32
PHC3-217ENST00000497658 TMUB1Q9BVT8 246 aa6.83□□□□□ -1.32
PHC3-217ENST00000497658 SRCIN1Q9C0H9 1055 aa6.83□□□□□ -1.32
PHC3-217ENST00000497658 RGS12O14924 1447 aa6.82□□□□□ -1.32
PHC3-217ENST00000497658 MAP3K7O43318 606 aa6.82□□□□□ -1.32
PHC3-217ENST00000497658 PDIA4P13667 645 aaKnown RBP6.82□□□□□ -1.32
PHC3-217ENST00000497658 MX1P20591 662 aa6.82□□□□□ -1.32
PHC3-217ENST00000497658 SAFB2Q14151 953 aaKnown RBP eCLIP6.82□□□□□ -1.32
PHC3-217ENST00000497658 GGT6Q6P531 493 aa6.82□□□□□ -1.32
PHC3-217ENST00000497658 TRIM67Q6ZTA4 783 aa6.82□□□□□ -1.32
PHC3-217ENST00000497658 PRAM1Q96QH2 718 aa6.82□□□□□ -1.32
PHC3-217ENST00000497658 ESYT1Q9BSJ8 1104 aa6.82□□□□□ -1.32
PHC3-217ENST00000497658 CABP1Q9NZU7 370 aa6.82□□□□□ -1.32
PHC3-217ENST00000497658 GOLGA6L6A8MZA4 724 aa6.81□□□□□ -1.32
PHC3-217ENST00000497658 HMOX1P09601 288 aa6.81□□□□□ -1.32
PHC3-217ENST00000497658 PRSS12P56730 875 aa6.81□□□□□ -1.32
PHC3-217ENST00000497658 UBE2HP62256 183 aa6.81□□□□□ -1.32
PHC3-217ENST00000497658 OTUD7AQ8TE49 926 aaPredicted RBP6.81□□□□□ -1.32
PHC3-217ENST00000497658 TATDN2Q93075 761 aa6.81□□□□□ -1.32
PHC3-217ENST00000497658 THUMPD2Q9BTF0 503 aaKnown RBP6.81□□□□□ -1.32
PHC3-217ENST00000497658 CDK19Q9BWU1 502 aa6.81□□□□□ -1.32
PHC3-217ENST00000497658 USP25Q9UHP3 1055 aa6.81□□□□□ -1.32
PHC3-217ENST00000497658 POGZQ7Z3K3 1410 aa6.81□□□□□ -1.32
PHC3-217ENST00000497658 C3orf80F5H4A9 247 aa6.81□□□□□ -1.32
PHC3-217ENST00000497658 CHL1O00533 1208 aa6.81□□□□□ -1.32
PHC3-217ENST00000497658 KDM4AO75164 1064 aa6.81□□□□□ -1.32
PHC3-217ENST00000497658 ADCY5O95622 1261 aa6.81□□□□□ -1.32
PHC3-217ENST00000497658 CCT4P50991 539 aaKnown RBP6.81□□□□□ -1.32
PHC3-217ENST00000497658 TAF3Q5VWG9 929 aa6.81□□□□□ -1.32
PHC3-217ENST00000497658 USP48Q86UV5 1035 aa6.81□□□□□ -1.32
PHC3-217ENST00000497658 FEZ1Q99689 392 aa6.81□□□□□ -1.32
PHC3-217ENST00000497658 EDC4Q6P2E9 1401 aaKnown RBP6.81□□□□□ -1.32
PHC3-217ENST00000497658 MINK1Q8N4C8 1332 aaPredicted RBP6.81□□□□□ -1.32
PHC3-217ENST00000497658 SYCP1Q15431 976 aa6.8□□□□□ -1.32
PHC3-217ENST00000497658 STK26Q9P289 416 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms