RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 CNKSR1Q969H4 720 aa14.38□□□□□ -0.11
TOM1-217ENST00000497448 EIF5P55010 431 aaKnown RBP14.37□□□□□ -0.11
TOM1-217ENST00000497448 AKAP4Q5JQC9 854 aa14.37□□□□□ -0.11
TOM1-217ENST00000497448 STYK1Q6J9G0 422 aa14.37□□□□□ -0.11
TOM1-217ENST00000497448 CFAP44Q96MT7 982 aa14.37□□□□□ -0.11
TOM1-217ENST00000497448 TSKSQ9UJT2 592 aa14.37□□□□□ -0.11
TOM1-217ENST00000497448 SRGNP10124 158 aa14.36□□□□□ -0.11
TOM1-217ENST00000497448 CCDC93Q567U6 631 aa14.36□□□□□ -0.11
TOM1-217ENST00000497448 SULT6B1Q6IMI4 303 aa14.36□□□□□ -0.11
TOM1-217ENST00000497448 PNMA8AQ86V59 439 aaPredicted RBP14.36□□□□□ -0.11
TOM1-217ENST00000497448 VSIG10Q8N0Z9 540 aa14.36□□□□□ -0.11
TOM1-217ENST00000497448 CNBD1Q8NA66 436 aa14.36□□□□□ -0.11
TOM1-217ENST00000497448 CAPNS2Q96L46 248 aa14.36□□□□□ -0.11
TOM1-217ENST00000497448 BEGAINQ9BUH8 593 aa14.36□□□□□ -0.11
TOM1-217ENST00000497448 LGR6Q9HBX8 967 aa14.36□□□□□ -0.11
TOM1-217ENST00000497448 DDX21Q9NR30 783 aaKnown RBP eCLIP14.36□□□□□ -0.11
TOM1-217ENST00000497448 CASP8AP2Q9UKL3 1982 aa14.36□□□□□ -0.11
TOM1-217ENST00000497448 A0A087WZG4 1122 aa14.35□□□□□ -0.11
TOM1-217ENST00000497448 CYP4F22Q6NT55 531 aa14.35□□□□□ -0.11
TOM1-217ENST00000497448 PAXIP1Q6ZW49 1069 aaPredicted RBP14.35□□□□□ -0.11
TOM1-217ENST00000497448 MASTLQ96GX5 879 aa14.35□□□□□ -0.11
TOM1-217ENST00000497448 MCOLN1Q9GZU1 580 aa14.35□□□□□ -0.11
TOM1-217ENST00000497448 ZNF277Q9NRM2 450 aaPredicted RBP14.35□□□□□ -0.11
TOM1-217ENST00000497448 PDE4DIPQ5VU43 2346 aa14.35□□□□□ -0.11
TOM1-217ENST00000497448 RNMTO43148 476 aaKnown RBP14.34□□□□□ -0.11
TOM1-217ENST00000497448 FKBP4Q02790 459 aaKnown RBP eCLIP14.34□□□□□ -0.11
TOM1-217ENST00000497448 GRM1Q13255 1194 aa14.34□□□□□ -0.11
TOM1-217ENST00000497448 C7orf43Q8WVR3 580 aa14.34□□□□□ -0.11
TOM1-217ENST00000497448 SIPA1L3O60292 1781 aaPredicted RBP14.33□□□□□ -0.12
TOM1-217ENST00000497448 ECE1P42892 770 aa14.33□□□□□ -0.12
TOM1-217ENST00000497448 ST5P78524 1137 aa14.33□□□□□ -0.12
TOM1-217ENST00000497448 FMR1Q06787 632 aaKnown RBP eCLIP14.33□□□□□ -0.12
TOM1-217ENST00000497448 GPR101Q96P66 508 aaPredicted RBP14.33□□□□□ -0.12
TOM1-217ENST00000497448 COL4A5P29400 1685 aa14.33□□□□□ -0.12
TOM1-217ENST00000497448 NPHP1O15259 732 aa14.32□□□□□ -0.12
TOM1-217ENST00000497448 OLFM4Q6UX06 510 aa14.32□□□□□ -0.12
TOM1-217ENST00000497448 TBC1D2BQ9UPU7 963 aa14.32□□□□□ -0.12
TOM1-217ENST00000497448 ZNF330Q9Y3S2 320 aaPredicted RBP14.32□□□□□ -0.12
TOM1-217ENST00000497448 SNED1Q8TER0 1413 aa14.32□□□□□ -0.12
TOM1-217ENST00000497448 FZD9O00144 591 aa14.31□□□□□ -0.12
TOM1-217ENST00000497448 STARD3NLO95772 234 aa14.31□□□□□ -0.12
TOM1-217ENST00000497448 GPC2Q8N158 579 aa14.31□□□□□ -0.12
TOM1-217ENST00000497448 AOC2O75106 756 aa14.3□□□□□ -0.12
TOM1-217ENST00000497448 CAMTA2O94983 1202 aa14.3□□□□□ -0.12
TOM1-217ENST00000497448 IARSP41252 1262 aaKnown RBP14.3□□□□□ -0.12
TOM1-217ENST00000497448 SETDB2Q96T68 719 aa14.3□□□□□ -0.12
TOM1-217ENST00000497448 TLL2Q9Y6L7 1015 aa14.3□□□□□ -0.12
TOM1-217ENST00000497448 IL13P35225 146 aa14.29□□□□□ -0.12
TOM1-217ENST00000497448 HEG1Q9ULI3 1381 aa14.29□□□□□ -0.12
TOM1-217ENST00000497448 TRAF5O00463 557 aa14.28□□□□□ -0.12
TOM1-217ENST00000497448 NPR1P16066 1061 aa14.28□□□□□ -0.12
TOM1-217ENST00000497448 MAP2K2P36507 400 aa14.28□□□□□ -0.12
TOM1-217ENST00000497448 IL6STP40189 918 aaPredicted RBP14.28□□□□□ -0.12
TOM1-217ENST00000497448 DGKZQ13574 1117 aa14.28□□□□□ -0.12
TOM1-217ENST00000497448 CST9Q5W186 159 aa14.28□□□□□ -0.12
TOM1-217ENST00000497448 TTC5Q8N0Z6 440 aa14.28□□□□□ -0.12
TOM1-217ENST00000497448 CA12O43570 354 aa14.27□□□□□ -0.13
TOM1-217ENST00000497448 RTKN2Q8IZC4 609 aa14.27□□□□□ -0.13
TOM1-217ENST00000497448 ZNF496Q96IT1 587 aaPredicted RBP14.27□□□□□ -0.13
TOM1-217ENST00000497448 SCNN1DP51172 638 aa14.26□□□□□ -0.13
TOM1-217ENST00000497448 GJA3Q9Y6H8 435 aa14.26□□□□□ -0.13
TOM1-217ENST00000497448 KLRG2A4D1S0 409 aaPredicted RBP14.25□□□□□ -0.13
TOM1-217ENST00000497448 LMOD1P29536 600 aaPredicted RBP14.25□□□□□ -0.13
TOM1-217ENST00000497448 EPS15P42566 896 aa14.25□□□□□ -0.13
TOM1-217ENST00000497448 BRPF1P55201 1214 aaPredicted RBP14.25□□□□□ -0.13
TOM1-217ENST00000497448 MTHFSDQ2M296 383 aaKnown RBP14.25□□□□□ -0.13
TOM1-217ENST00000497448 NBPF5PQ86XG9 351 aaPredicted RBP14.25□□□□□ -0.13
TOM1-217ENST00000497448 SYNE4Q8N205 404 aa14.25□□□□□ -0.13
TOM1-217ENST00000497448 POLR3GLQ9BT43 218 aa14.25□□□□□ -0.13
TOM1-217ENST00000497448 SOX10P56693 466 aa14.24□□□□□ -0.13
TOM1-217ENST00000497448 SAPCD2Q86UD0 394 aa14.24□□□□□ -0.13
TOM1-217ENST00000497448 DZIP3Q86Y13 1208 aaKnown RBP14.24□□□□□ -0.13
TOM1-217ENST00000497448 A1BGP04217 495 aa14.23□□□□□ -0.13
TOM1-217ENST00000497448 HMOX1P09601 288 aa14.23□□□□□ -0.13
TOM1-217ENST00000497448 EIF6P56537 245 aaKnown RBP14.23□□□□□ -0.13
TOM1-217ENST00000497448 PRPF38BQ5VTL8 546 aaKnown RBP14.23□□□□□ -0.13
TOM1-217ENST00000497448 ZNF790Q6PG37 636 aa14.23□□□□□ -0.13
TOM1-217ENST00000497448 USP50Q70EL3 339 aaPredicted RBP14.23□□□□□ -0.13
TOM1-217ENST00000497448 MORC1Q86VD1 984 aa14.23□□□□□ -0.13
TOM1-217ENST00000497448 JDP2Q8WYK2 163 aa14.23□□□□□ -0.13
TOM1-217ENST00000497448 PSMD1Q99460 953 aa14.23□□□□□ -0.13
TOM1-217ENST00000497448 TEX13AQ9BXU3 409 aaPredicted RBP14.23□□□□□ -0.13
TOM1-217ENST00000497448 NPM2Q86SE8 214 aaKnown RBP14.22□□□□□ -0.13
TOM1-217ENST00000497448 CELF2O95319 508 aaKnown RBP14.21□□□□□ -0.13
TOM1-217ENST00000497448 CIAPIN1Q6FI81 312 aa14.21□□□□□ -0.13
TOM1-217ENST00000497448 HHIPL1Q96JK4 782 aa14.21□□□□□ -0.13
TOM1-217ENST00000497448 PIP4K2AP48426 406 aaPredicted RBP14.2□□□□□ -0.14
TOM1-217ENST00000497448 PANK3Q9H999 370 aa14.2□□□□□ -0.14
TOM1-217ENST00000497448 ALDH1B1P30837 517 aa14.19□□□□□ -0.14
TOM1-217ENST00000497448 CLEC4GQ6UXB4 293 aa14.19□□□□□ -0.14
TOM1-217ENST00000497448 FMNL2Q96PY5 1086 aa14.19□□□□□ -0.14
TOM1-217ENST00000497448 ZNF652Q9Y2D9 606 aa14.19□□□□□ -0.14
TOM1-217ENST00000497448 ABCC12Q96J65 1359 aa14.19□□□□□ -0.14
TOM1-217ENST00000497448 TEFQ10587 303 aa14.18□□□□□ -0.14
TOM1-217ENST00000497448 SLC51AQ86UW1 340 aa14.18□□□□□ -0.14
TOM1-217ENST00000497448 ZIC5Q96T25 663 aa14.18□□□□□ -0.14
TOM1-217ENST00000497448 FAM177BA6PVY3 158 aa14.17□□□□□ -0.14
TOM1-217ENST00000497448 TPTE2Q6XPS3 522 aa14.17□□□□□ -0.14
TOM1-217ENST00000497448 LARGE2Q8N3Y3 721 aa14.17□□□□□ -0.14
TOM1-217ENST00000497448 GLIS2Q9BZE0 524 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms