RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 DZIP3Q86Y13 1208 aaKnown RBP13.28□□□□□ -0.28
USP13-205ENST00000497380 PI4KAP1Q8N8J0 262 aa13.28□□□□□ -0.28
USP13-205ENST00000497380 PLBD2Q8NHP8 589 aa13.28□□□□□ -0.28
USP13-205ENST00000497380 TAF1LQ8IZX4 1826 aa13.27□□□□□ -0.28
USP13-205ENST00000497380 PLIN1O60240 522 aa13.27□□□□□ -0.29
USP13-205ENST00000497380 CCT4P50991 539 aaKnown RBP13.27□□□□□ -0.29
USP13-205ENST00000497380 HSP90AB3PQ58FF7 597 aa13.27□□□□□ -0.29
USP13-205ENST00000497380 DNAAF4Q8WXU2 420 aa13.27□□□□□ -0.29
USP13-205ENST00000497380 STK32BQ9NY57 414 aa13.27□□□□□ -0.29
USP13-205ENST00000497380 ZNF652Q9Y2D9 606 aa13.27□□□□□ -0.29
USP13-205ENST00000497380 C4BP0C0L5 1744 aa13.27□□□□□ -0.29
USP13-205ENST00000497380 ZPR1O75312 459 aa13.26□□□□□ -0.29
USP13-205ENST00000497380 RFC4P35249 363 aa13.26□□□□□ -0.29
USP13-205ENST00000497380 COL15A1P39059 1388 aa13.26□□□□□ -0.29
USP13-205ENST00000497380 MAP3K15Q6ZN16 1313 aa13.26□□□□□ -0.29
USP13-205ENST00000497380 RREB1Q92766 1687 aa13.26□□□□□ -0.29
USP13-205ENST00000497380 TFCP2L1Q9NZI6 479 aa13.26□□□□□ -0.29
USP13-205ENST00000497380 MAP3K2Q9Y2U5 619 aa13.26□□□□□ -0.29
USP13-205ENST00000497380 SLC4A10Q6U841 1118 aa13.25□□□□□ -0.29
USP13-205ENST00000497380 CLEC4GQ6UXB4 293 aa13.25□□□□□ -0.29
USP13-205ENST00000497380 CLUAP1Q96AJ1 413 aa13.25□□□□□ -0.29
USP13-205ENST00000497380 AKT1S1Q96B36 256 aa13.25□□□□□ -0.29
USP13-205ENST00000497380 METTL22Q9BUU2 404 aaPredicted RBP13.25□□□□□ -0.29
USP13-205ENST00000497380 ABCC4O15439 1325 aa13.24□□□□□ -0.29
USP13-205ENST00000497380 MYH14Q7Z406 1995 aaKnown RBP13.24□□□□□ -0.29
USP13-205ENST00000497380 R3HDM1Q15032 1099 aaKnown RBP13.24□□□□□ -0.29
USP13-205ENST00000497380 SLC15A2Q16348 729 aa13.24□□□□□ -0.29
USP13-205ENST00000497380 INTS3Q68E01 1043 aaKnown RBP13.24□□□□□ -0.29
USP13-205ENST00000497380 GIGYF2Q6Y7W6 1299 aaKnown RBP13.24□□□□□ -0.29
USP13-205ENST00000497380 TTLL7Q6ZT98 887 aa13.24□□□□□ -0.29
USP13-205ENST00000497380 LINS1Q8NG48 757 aa13.24□□□□□ -0.29
USP13-205ENST00000497380 SRCIN1Q9C0H9 1055 aa13.24□□□□□ -0.29
USP13-205ENST00000497380 ZBTB3Q9H5J0 574 aa13.24□□□□□ -0.29
USP13-205ENST00000497380 NARFQ9UHQ1 456 aa13.24□□□□□ -0.29
USP13-205ENST00000497380 DDX19BQ9UMR2 479 aa13.24□□□□□ -0.29
USP13-205ENST00000497380 TBC1D2BQ9UPU7 963 aa13.24□□□□□ -0.29
USP13-205ENST00000497380 PXDNLA1KZ92 1463 aa13.23□□□□□ -0.29
USP13-205ENST00000497380 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.23□□□□□ -0.29
USP13-205ENST00000497380 F6X3S4 739 aa13.23□□□□□ -0.29
USP13-205ENST00000497380 ALDH1L1O75891 902 aa13.23□□□□□ -0.29
USP13-205ENST00000497380 AAMPQ13685 434 aa13.23□□□□□ -0.29
USP13-205ENST00000497380 ARHGEF1Q92888 912 aaKnown RBP13.23□□□□□ -0.29
USP13-205ENST00000497380 HDAC5Q9UQL6 1122 aa13.23□□□□□ -0.29
USP13-205ENST00000497380 ADCY9O60503 1353 aa13.22□□□□□ -0.29
USP13-205ENST00000497380 PHF14O94880 888 aa13.22□□□□□ -0.29
USP13-205ENST00000497380 TCIRG1Q13488 830 aa13.22□□□□□ -0.29
USP13-205ENST00000497380 MVPQ14764 893 aaKnown RBP13.22□□□□□ -0.29
USP13-205ENST00000497380 ERICH6BQ5W0A0 696 aa13.22□□□□□ -0.29
USP13-205ENST00000497380 ITPRIPQ8IWB1 547 aa13.22□□□□□ -0.29
USP13-205ENST00000497380 TMEM57Q8N5G2 664 aa13.22□□□□□ -0.29
USP13-205ENST00000497380 ATP10DQ9P241 1426 aa13.22□□□□□ -0.29
USP13-205ENST00000497380 CAMTA2O94983 1202 aa13.21□□□□□ -0.29
USP13-205ENST00000497380 TRIM28Q13263 835 aaKnown RBP13.21□□□□□ -0.29
USP13-205ENST00000497380 BEND3Q5T5X7 828 aa13.21□□□□□ -0.29
USP13-205ENST00000497380 CCDC191Q8NCU4 936 aa13.21□□□□□ -0.29
USP13-205ENST00000497380 PANK1Q8TE04 598 aa13.21□□□□□ -0.29
USP13-205ENST00000497380 MYD88Q99836 296 aa13.21□□□□□ -0.29
USP13-205ENST00000497380 COG6Q9Y2V7 657 aa13.21□□□□□ -0.29
USP13-205ENST00000497380 IBTKQ9P2D0 1353 aaPredicted RBP13.2□□□□□ -0.3
USP13-205ENST00000497380 USP42Q9H9J4 1324 aaKnown RBP13.2□□□□□ -0.3
USP13-205ENST00000497380 DCAF8L1A6NGE4 600 aa13.2□□□□□ -0.3
USP13-205ENST00000497380 MSH5O43196 834 aa13.2□□□□□ -0.3
USP13-205ENST00000497380 ZNF827Q17R98 1081 aa13.2□□□□□ -0.3
USP13-205ENST00000497380 PARP10Q53GL7 1025 aa13.2□□□□□ -0.3
USP13-205ENST00000497380 C20orf194Q5TEA3 1177 aa13.2□□□□□ -0.3
USP13-205ENST00000497380 GNAI3P08754 354 aa13.19□□□□□ -0.3
USP13-205ENST00000497380 RLBP1P12271 317 aa13.19□□□□□ -0.3
USP13-205ENST00000497380 HLFQ16534 295 aa13.19□□□□□ -0.3
USP13-205ENST00000497380 USPL1Q5W0Q7 1092 aa13.19□□□□□ -0.3
USP13-205ENST00000497380 NLGN1Q8N2Q7 840 aa13.19□□□□□ -0.3
USP13-205ENST00000497380 CWC25Q9NXE8 425 aaPredicted RBP13.19□□□□□ -0.3
USP13-205ENST00000497380 C9orf78Q9NZ63 289 aaPredicted RBP13.19□□□□□ -0.3
USP13-205ENST00000497380 TNNQ9UQP3 1299 aa13.19□□□□□ -0.3
USP13-205ENST00000497380 UBR3Q6ZT12 1888 aa13.19□□□□□ -0.3
USP13-205ENST00000497380 NEURL1BA8MQ27 555 aa13.18□□□□□ -0.3
USP13-205ENST00000497380 HSP90B1P14625 803 aaKnown RBP13.18□□□□□ -0.3
USP13-205ENST00000497380 PPP1R42Q7Z4L9 355 aa13.18□□□□□ -0.3
USP13-205ENST00000497380 CRBNQ96SW2 442 aa13.18□□□□□ -0.3
USP13-205ENST00000497380 ISCA1Q9BUE6 129 aa13.18□□□□□ -0.3
USP13-205ENST00000497380 PNPLA7Q6ZV29 1317 aa13.17□□□□□ -0.3
USP13-205ENST00000497380 NUP188Q5SRE5 1749 aa13.17□□□□□ -0.3
USP13-205ENST00000497380 CWF19L2Q2TBE0 894 aaKnown RBP13.17□□□□□ -0.3
USP13-205ENST00000497380 COL23A1Q86Y22 540 aaPredicted RBP13.17□□□□□ -0.3
USP13-205ENST00000497380 ZNF34Q8IZ26 560 aa13.17□□□□□ -0.3
USP13-205ENST00000497380 SLC16A10Q8TF71 515 aa13.17□□□□□ -0.3
USP13-205ENST00000497380 SETDB2Q96T68 719 aa13.17□□□□□ -0.3
USP13-205ENST00000497380 ANO8Q9HCE9 1232 aaPredicted RBP13.17□□□□□ -0.3
USP13-205ENST00000497380 NIP7Q9Y221 180 aaKnown RBP eCLIP13.17□□□□□ -0.3
USP13-205ENST00000497380 ARFGEF2Q9Y6D5 1785 aa13.17□□□□□ -0.3
USP13-205ENST00000497380 ATP5J2-PTCD1G3V325 749 aa13.16□□□□□ -0.3
USP13-205ENST00000497380 GRM8O00222 908 aa13.16□□□□□ -0.3
USP13-205ENST00000497380 ZBTB7BO15156 539 aaPredicted RBP13.16□□□□□ -0.3
USP13-205ENST00000497380 IGKV5-2P06315 115 aa13.16□□□□□ -0.3
USP13-205ENST00000497380 GYS1P13807 737 aa13.16□□□□□ -0.3
USP13-205ENST00000497380 IRX6P78412 446 aaPredicted RBP13.16□□□□□ -0.3
USP13-205ENST00000497380 FKBP8Q14318 412 aa13.16□□□□□ -0.3
USP13-205ENST00000497380 GCKRQ14397 625 aa13.16□□□□□ -0.3
USP13-205ENST00000497380 IFFO2Q5TF58 517 aa13.16□□□□□ -0.3
USP13-205ENST00000497380 NYXQ9GZU5 481 aa13.16□□□□□ -0.3
USP13-205ENST00000497380 SRP68Q9UHB9 627 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms