RNA–Protein interactions for RNA: ENST00000497144.5

SFXN5-222, Transcript of sideroflexin 5, humanhuman

TSL 4

Gene SFXN5, Length 598 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-222ENST00000497144 C16orf71Q8IYS4 520 aaPredicted RBP23.19■■□□□ 1.3
SFXN5-222ENST00000497144 KCNQ3O43525 872 aa23.18■■□□□ 1.3
SFXN5-222ENST00000497144 KCNA3P22001 575 aa23.18■■□□□ 1.3
SFXN5-222ENST00000497144 NFIXQ14938 502 aa23.18■■□□□ 1.3
SFXN5-222ENST00000497144 BCL2L12Q9HB09 334 aa23.18■■□□□ 1.3
SFXN5-222ENST00000497144 SIPA1L3O60292 1781 aaPredicted RBP23.18■■□□□ 1.3
SFXN5-222ENST00000497144 EIF5P55010 431 aaKnown RBP23.17■■□□□ 1.3
SFXN5-222ENST00000497144 DNAJC5GQ8N7S2 189 aa23.17■■□□□ 1.3
SFXN5-222ENST00000497144 VIRMAQ69YN4 1812 aaKnown RBP23.17■■□□□ 1.3
SFXN5-222ENST00000497144 EXOSC9Q06265 439 aaKnown RBP23.16■■□□□ 1.3
SFXN5-222ENST00000497144 C9orf131Q5VYM1 1079 aa23.16■■□□□ 1.3
SFXN5-222ENST00000497144 PIM2Q9P1W9 311 aa23.16■■□□□ 1.3
SFXN5-222ENST00000497144 ZNF330Q9Y3S2 320 aaPredicted RBP23.16■■□□□ 1.3
SFXN5-222ENST00000497144 A0A087WZG4 1122 aa23.15■■□□□ 1.3
SFXN5-222ENST00000497144 TWISTNBQ3B726 338 aaPredicted RBP23.15■■□□□ 1.3
SFXN5-222ENST00000497144 BRCA1P38398 1863 aaKnown RBP23.15■■□□□ 1.3
SFXN5-222ENST00000497144 UBR2Q8IWV8 1755 aa23.14■■□□□ 1.3
SFXN5-222ENST00000497144 CHRNA5P30532 468 aa23.14■■□□□ 1.29
SFXN5-222ENST00000497144 RBM46Q8TBY0 533 aaKnown RBP23.14■■□□□ 1.29
SFXN5-222ENST00000497144 A1BGP04217 495 aa23.13■■□□□ 1.29
SFXN5-222ENST00000497144 DALRD3Q5D0E6 543 aaKnown RBP23.13■■□□□ 1.29
SFXN5-222ENST00000497144 C8orf58Q8NAV2 365 aa23.13■■□□□ 1.29
SFXN5-222ENST00000497144 WDR90Q96KV7 1748 aa23.13■■□□□ 1.29
SFXN5-222ENST00000497144 ARFGEF1Q9Y6D6 1849 aa23.12■■□□□ 1.29
SFXN5-222ENST00000497144 SERPINB2P05120 415 aa23.12■■□□□ 1.29
SFXN5-222ENST00000497144 BICDL1Q6ZP65 573 aa23.12■■□□□ 1.29
SFXN5-222ENST00000497144 KDM3BQ7LBC6 1761 aa23.12■■□□□ 1.29
SFXN5-222ENST00000497144 KDM2BQ8NHM5 1336 aa23.11■■□□□ 1.29
SFXN5-222ENST00000497144 IL6STP40189 918 aaPredicted RBP23.11■■□□□ 1.29
SFXN5-222ENST00000497144 CCDC30Q5VVM6 783 aa23.11■■□□□ 1.29
SFXN5-222ENST00000497144 TBC1D2BQ9UPU7 963 aa23.11■■□□□ 1.29
SFXN5-222ENST00000497144 ERBB4Q15303 1308 aa23.1■■□□□ 1.29
SFXN5-222ENST00000497144 VAMP4O75379 141 aa23.1■■□□□ 1.29
SFXN5-222ENST00000497144 NPM2Q86SE8 214 aaKnown RBP23.1■■□□□ 1.29
SFXN5-222ENST00000497144 RNF181Q9P0P0 153 aa23.1■■□□□ 1.29
SFXN5-222ENST00000497144 USP16Q9Y5T5 823 aa23.1■■□□□ 1.29
SFXN5-222ENST00000497144 ELL2O00472 640 aaPredicted RBP23.09■■□□□ 1.29
SFXN5-222ENST00000497144 CENPBP07199 599 aaPredicted RBP23.09■■□□□ 1.29
SFXN5-222ENST00000497144 FSTL1Q12841 308 aa23.09■■□□□ 1.29
SFXN5-222ENST00000497144 HDGFL1Q5TGJ6 251 aa23.09■■□□□ 1.29
SFXN5-222ENST00000497144 PRAMEF22A3QJZ6 481 aa23.08■■□□□ 1.29
SFXN5-222ENST00000497144 TBC1D9BQ66K14 1250 aa23.08■■□□□ 1.29
SFXN5-222ENST00000497144 TSPYL6Q8N831 410 aa23.08■■□□□ 1.29
SFXN5-222ENST00000497144 STK31Q9BXU1 1019 aa23.08■■□□□ 1.29
SFXN5-222ENST00000497144 PIP4K2AP48426 406 aaPredicted RBP23.07■■□□□ 1.28
SFXN5-222ENST00000497144 KRT24Q2M2I5 525 aa23.07■■□□□ 1.28
SFXN5-222ENST00000497144 ALDH1L2Q3SY69 923 aa23.07■■□□□ 1.28
SFXN5-222ENST00000497144 KLRG1Q96E93 195 aa23.07■■□□□ 1.28
SFXN5-222ENST00000497144 HTRA3P83110 453 aa23.06■■□□□ 1.28
SFXN5-222ENST00000497144 DBF4Q9UBU7 674 aaPredicted RBP23.06■■□□□ 1.28
SFXN5-222ENST00000497144 EIF2S2P20042 333 aaKnown RBP23.05■■□□□ 1.28
SFXN5-222ENST00000497144 CAMTA2O94983 1202 aa23.04■■□□□ 1.28
SFXN5-222ENST00000497144 DZIP3Q86Y13 1208 aaKnown RBP23.04■■□□□ 1.28
SFXN5-222ENST00000497144 C2CD5Q86YS7 1000 aa23.04■■□□□ 1.28
SFXN5-222ENST00000497144 RRAGCQ9HB90 399 aa23.04■■□□□ 1.28
SFXN5-222ENST00000497144 CARMIL3Q8ND23 1372 aa23.03■■□□□ 1.28
SFXN5-222ENST00000497144 TNRC6CQ9HCJ0 1690 aaKnown RBP23.03■■□□□ 1.28
SFXN5-222ENST00000497144 H0YIN7 160 aa23.02■■□□□ 1.28
SFXN5-222ENST00000497144 SETDB2Q96T68 719 aa23.02■■□□□ 1.28
SFXN5-222ENST00000497144 DDX21Q9NR30 783 aaKnown RBP eCLIP23.02■■□□□ 1.28
SFXN5-222ENST00000497144 HYPKQ9NX55 129 aa23.02■■□□□ 1.28
SFXN5-222ENST00000497144 CCDC24Q8N4L8 307 aa23.01■■□□□ 1.27
SFXN5-222ENST00000497144 JMYQ8N9B5 988 aa23.01■■□□□ 1.27
SFXN5-222ENST00000497144 RCAN3Q9UKA8 241 aa23.01■■□□□ 1.27
SFXN5-222ENST00000497144 RARSP54136 660 aaKnown RBP23■■□□□ 1.27
SFXN5-222ENST00000497144 PRR5LQ6MZQ0 368 aa23■■□□□ 1.27
SFXN5-222ENST00000497144 TTLL6Q8N841 843 aa23■■□□□ 1.27
SFXN5-222ENST00000497144 NBPF26B4DH59 902 aa22.99■■□□□ 1.27
SFXN5-222ENST00000497144 BRPF1P55201 1214 aaPredicted RBP22.99■■□□□ 1.27
SFXN5-222ENST00000497144 NBPF10Q6P3W6 841 aaKnown RBP22.99■■□□□ 1.27
SFXN5-222ENST00000497144 NBPF15Q8N660 670 aa22.99■■□□□ 1.27
SFXN5-222ENST00000497144 SMC1BQ8NDV3 1235 aa22.99■■□□□ 1.27
SFXN5-222ENST00000497144 BRIP1Q9BX63 1249 aa22.99■■□□□ 1.27
SFXN5-222ENST00000497144 SMC4Q9NTJ3 1288 aa22.99■■□□□ 1.27
SFXN5-222ENST00000497144 NRXN2Q9P2S2 1712 aa22.99■■□□□ 1.27
SFXN5-222ENST00000497144 AFDNP55196 1824 aaKnown RBP22.98■■□□□ 1.27
SFXN5-222ENST00000497144 NPHP1O15259 732 aa22.98■■□□□ 1.27
SFXN5-222ENST00000497144 PDE6BP35913 854 aa22.98■■□□□ 1.27
SFXN5-222ENST00000497144 COL13A1Q5TAT6 717 aaPredicted RBP22.98■■□□□ 1.27
SFXN5-222ENST00000497144 SBF1O95248 1867 aa22.98■■□□□ 1.27
SFXN5-222ENST00000497144 SLC4A2P04920 1241 aa22.97■■□□□ 1.27
SFXN5-222ENST00000497144 CNBD1Q8NA66 436 aa22.97■■□□□ 1.27
SFXN5-222ENST00000497144 NECTIN2Q92692 538 aa22.97■■□□□ 1.27
SFXN5-222ENST00000497144 CHPF2Q9P2E5 772 aa22.97■■□□□ 1.27
SFXN5-222ENST00000497144 ZC3H4Q9UPT8 1303 aaKnown RBP22.97■■□□□ 1.27
SFXN5-222ENST00000497144 IPO8O15397 1037 aaKnown RBP22.96■■□□□ 1.27
SFXN5-222ENST00000497144 RASSF7Q02833 373 aa22.96■■□□□ 1.27
SFXN5-222ENST00000497144 CLEC4GQ6UXB4 293 aa22.96■■□□□ 1.27
SFXN5-222ENST00000497144 SSH1Q8WYL5 1049 aa22.96■■□□□ 1.27
SFXN5-222ENST00000497144 ZNF622Q969S3 477 aaKnown RBP eCLIP22.96■■□□□ 1.27
SFXN5-222ENST00000497144 ZNF652Q9Y2D9 606 aa22.96■■□□□ 1.27
SFXN5-222ENST00000497144 KIF16BQ96L93 1317 aa22.96■■□□□ 1.27
SFXN5-222ENST00000497144 SCN7AQ01118 1682 aa22.96■■□□□ 1.27
SFXN5-222ENST00000497144 DDX58O95786 925 aaKnown RBP22.95■■□□□ 1.26
SFXN5-222ENST00000497144 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.95■■□□□ 1.26
SFXN5-222ENST00000497144 PCNTO95613 3336 aa22.95■■□□□ 1.26
SFXN5-222ENST00000497144 ST5P78524 1137 aa22.94■■□□□ 1.26
SFXN5-222ENST00000497144 PDZRN3Q9UPQ7 1066 aa22.94■■□□□ 1.26
SFXN5-222ENST00000497144 PTPRCP08575 1304 aa22.93■■□□□ 1.26
SFXN5-222ENST00000497144 CAPN15O75808 1086 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms