RNA–Protein interactions for RNA: ENST00000497091.1

PBX3-211, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 425 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-211ENST00000497091 ERVV-1B6SEH8 477 aa24.58■■□□□ 1.53
PBX3-211ENST00000497091 YY1P25490 414 aa24.58■■□□□ 1.53
PBX3-211ENST00000497091 TBC1D9BQ66K14 1250 aa24.58■■□□□ 1.53
PBX3-211ENST00000497091 COPS6Q7L5N1 327 aa24.58■■□□□ 1.53
PBX3-211ENST00000497091 HYPKQ9NX55 129 aa24.58■■□□□ 1.53
PBX3-211ENST00000497091 RGL2O15211 777 aa24.57■■□□□ 1.52
PBX3-211ENST00000497091 HNRNPUQ00839 825 aaKnown RBP eCLIP24.57■■□□□ 1.52
PBX3-211ENST00000497091 DDR1Q08345 913 aa24.57■■□□□ 1.52
PBX3-211ENST00000497091 AIMP1Q12904 312 aaKnown RBP24.57■■□□□ 1.52
PBX3-211ENST00000497091 SETDB2Q96T68 719 aa24.57■■□□□ 1.52
PBX3-211ENST00000497091 MAP3K15Q6ZN16 1313 aa24.57■■□□□ 1.52
PBX3-211ENST00000497091 SLFN5Q08AF3 891 aa24.56■■□□□ 1.52
PBX3-211ENST00000497091 XAGE3Q8WTP9 111 aa24.56■■□□□ 1.52
PBX3-211ENST00000497091 CD2APQ9Y5K6 639 aa24.56■■□□□ 1.52
PBX3-211ENST00000497091 LAMB4A4D0S4 1761 aa24.55■■□□□ 1.52
PBX3-211ENST00000497091 POLRMTO00411 1230 aaKnown RBP24.55■■□□□ 1.52
PBX3-211ENST00000497091 HLFQ16534 295 aa24.55■■□□□ 1.52
PBX3-211ENST00000497091 ZBTB3Q9H5J0 574 aa24.55■■□□□ 1.52
PBX3-211ENST00000497091 C4AP0C0L4 1744 aa24.55■■□□□ 1.52
PBX3-211ENST00000497091 VAMP4O75379 141 aa24.54■■□□□ 1.52
PBX3-211ENST00000497091 SERPINB2P05120 415 aa24.54■■□□□ 1.52
PBX3-211ENST00000497091 CDCA7LQ96GN5 454 aa24.54■■□□□ 1.52
PBX3-211ENST00000497091 STK31Q9BXU1 1019 aa24.54■■□□□ 1.52
PBX3-211ENST00000497091 COL24A1Q17RW2 1714 aa24.53■■□□□ 1.52
PBX3-211ENST00000497091 TCERG1O14776 1098 aaKnown RBP24.51■■□□□ 1.51
PBX3-211ENST00000497091 ANKRD13DQ6ZTN6 518 aa24.51■■□□□ 1.51
PBX3-211ENST00000497091 NIP7Q9Y221 180 aaKnown RBP eCLIP24.51■■□□□ 1.51
PBX3-211ENST00000497091 SLC4A2P04920 1241 aa24.5■■□□□ 1.51
PBX3-211ENST00000497091 GIGYF2Q6Y7W6 1299 aaKnown RBP24.5■■□□□ 1.51
PBX3-211ENST00000497091 TRMT2AQ8IZ69 625 aaKnown RBP24.49■■□□□ 1.51
PBX3-211ENST00000497091 PHAXQ9H814 394 aaKnown RBP24.49■■□□□ 1.51
PBX3-211ENST00000497091 NPHP1O15259 732 aa24.48■■□□□ 1.51
PBX3-211ENST00000497091 NLGN2Q8NFZ4 835 aa24.48■■□□□ 1.51
PBX3-211ENST00000497091 PLBD2Q8NHP8 589 aa24.48■■□□□ 1.51
PBX3-211ENST00000497091 CARMIL3Q8ND23 1372 aa24.47■■□□□ 1.51
PBX3-211ENST00000497091 HSP90AB3PQ58FF7 597 aa24.47■■□□□ 1.51
PBX3-211ENST00000497091 TGFB2P61812 414 aa24.46■■□□□ 1.51
PBX3-211ENST00000497091 TPTE2Q6XPS3 522 aa24.46■■□□□ 1.51
PBX3-211ENST00000497091 NBPF5PQ86XG9 351 aaPredicted RBP24.46■■□□□ 1.51
PBX3-211ENST00000497091 DDX58O95786 925 aaKnown RBP24.45■■□□□ 1.5
PBX3-211ENST00000497091 GPTP24298 496 aa24.45■■□□□ 1.5
PBX3-211ENST00000497091 RIC3Q7Z5B4 369 aa24.45■■□□□ 1.5
PBX3-211ENST00000497091 ZNF34Q8IZ26 560 aa24.45■■□□□ 1.5
PBX3-211ENST00000497091 FAM177BA6PVY3 158 aa24.44■■□□□ 1.5
PBX3-211ENST00000497091 TCIRG1Q13488 830 aa24.44■■□□□ 1.5
PBX3-211ENST00000497091 CNBD1Q8NA66 436 aa24.44■■□□□ 1.5
PBX3-211ENST00000497091 GTF2E1P29083 439 aaPredicted RBP24.43■■□□□ 1.5
PBX3-211ENST00000497091 PRR5LQ6MZQ0 368 aa24.43■■□□□ 1.5
PBX3-211ENST00000497091 PARP10Q53GL7 1025 aa24.42■■□□□ 1.5
PBX3-211ENST00000497091 NYXQ9GZU5 481 aa24.42■■□□□ 1.5
PBX3-211ENST00000497091 SCN7AQ01118 1682 aa24.41■■□□□ 1.5
PBX3-211ENST00000497091 A0A0G2JLW4 131 aa24.41■■□□□ 1.5
PBX3-211ENST00000497091 ST5P78524 1137 aa24.41■■□□□ 1.5
PBX3-211ENST00000497091 G2E3Q7L622 706 aa24.41■■□□□ 1.5
PBX3-211ENST00000497091 PPP1R42Q7Z4L9 355 aa24.41■■□□□ 1.5
PBX3-211ENST00000497091 CCDC24Q8N4L8 307 aa24.41■■□□□ 1.5
PBX3-211ENST00000497091 BRIP1Q9BX63 1249 aa24.41■■□□□ 1.5
PBX3-211ENST00000497091 C10orf71Q711Q0 1435 aa24.41■■□□□ 1.5
PBX3-211ENST00000497091 ATP10DQ9P241 1426 aa24.41■■□□□ 1.5
PBX3-211ENST00000497091 SUSD4Q5VX71 490 aa24.4■■□□□ 1.5
PBX3-211ENST00000497091 UBN2Q6ZU65 1347 aa24.39■■□□□ 1.5
PBX3-211ENST00000497091 DPEP1P16444 411 aa24.39■■□□□ 1.49
PBX3-211ENST00000497091 KSR2Q6VAB6 950 aa24.39■■□□□ 1.49
PBX3-211ENST00000497091 ZNF428Q96B54 188 aa24.39■■□□□ 1.49
PBX3-211ENST00000497091 ZBED9Q6R2W3 1325 aa24.38■■□□□ 1.49
PBX3-211ENST00000497091 PI4KAP2A4QPH2 592 aa24.38■■□□□ 1.49
PBX3-211ENST00000497091 PDE6BP35913 854 aa24.38■■□□□ 1.49
PBX3-211ENST00000497091 FLIIQ13045 1269 aa24.38■■□□□ 1.49
PBX3-211ENST00000497091 GPR162Q16538 588 aa24.38■■□□□ 1.49
PBX3-211ENST00000497091 PELP1Q8IZL8 1130 aaKnown RBP24.38■■□□□ 1.49
PBX3-211ENST00000497091 PI4KAP1Q8N8J0 262 aa24.38■■□□□ 1.49
PBX3-211ENST00000497091 BCORQ6W2J9 1755 aa24.37■■□□□ 1.49
PBX3-211ENST00000497091 CT47B1P0C2W7 299 aaPredicted RBP24.37■■□□□ 1.49
PBX3-211ENST00000497091 NLRP10Q86W26 655 aa24.37■■□□□ 1.49
PBX3-211ENST00000497091 UTP14AQ9BVJ6 771 aaKnown RBP24.37■■□□□ 1.49
PBX3-211ENST00000497091 MAP3K2Q9Y2U5 619 aa24.37■■□□□ 1.49
PBX3-211ENST00000497091 ATP5J2-PTCD1G3V325 749 aa24.36■■□□□ 1.49
PBX3-211ENST00000497091 H0YIN7 160 aa24.36■■□□□ 1.49
PBX3-211ENST00000497091 CHRNA5P30532 468 aa24.36■■□□□ 1.49
PBX3-211ENST00000497091 FKBP5Q13451 457 aaPredicted RBP24.36■■□□□ 1.49
PBX3-211ENST00000497091 ISCA1Q9BUE6 129 aa24.36■■□□□ 1.49
PBX3-211ENST00000497091 METTL22Q9BUU2 404 aaPredicted RBP24.36■■□□□ 1.49
PBX3-211ENST00000497091 PDZRN3Q9UPQ7 1066 aa24.36■■□□□ 1.49
PBX3-211ENST00000497091 KCNA3P22001 575 aa24.35■■□□□ 1.49
PBX3-211ENST00000497091 TRIM28Q13263 835 aaKnown RBP24.35■■□□□ 1.49
PBX3-211ENST00000497091 NUTM1Q86Y26 1132 aa24.35■■□□□ 1.49
PBX3-211ENST00000497091 C2CD5Q86YS7 1000 aa24.35■■□□□ 1.49
PBX3-211ENST00000497091 MYD88Q99836 296 aa24.35■■□□□ 1.49
PBX3-211ENST00000497091 NTSR2O95665 410 aa24.34■■□□□ 1.49
PBX3-211ENST00000497091 ERFEQ4G0M1 354 aa24.34■■□□□ 1.49
PBX3-211ENST00000497091 PIM2Q9P1W9 311 aa24.34■■□□□ 1.49
PBX3-211ENST00000497091 TRMT112Q9UI30 125 aaKnown RBP24.34■■□□□ 1.49
PBX3-211ENST00000497091 ALDH1L2Q3SY69 923 aa24.33■■□□□ 1.49
PBX3-211ENST00000497091 SSH1Q8WYL5 1049 aa24.33■■□□□ 1.49
PBX3-211ENST00000497091 WWC3Q9ULE0 1092 aa24.33■■□□□ 1.49
PBX3-211ENST00000497091 PXDNLA1KZ92 1463 aa24.32■■□□□ 1.48
PBX3-211ENST00000497091 NEXNQ0ZGT2 675 aa24.32■■□□□ 1.48
PBX3-211ENST00000497091 MRPL50Q8N5N7 158 aaKnown RBP24.32■■□□□ 1.48
PBX3-211ENST00000497091 IBTKQ9P2D0 1353 aaPredicted RBP24.31■■□□□ 1.48
PBX3-211ENST00000497091 NUP98P52948 1817 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms