RNA–Protein interactions for RNA: ENST00000496925.5

PSMD2-220, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 2

Gene PSMD2, Length 723 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-220	ENST00000496925	CNKSR1	Q969H4	720 aa		13.58	□□□□□ -0.24
PSMD2-220	ENST00000496925	KLRG1	Q96E93	195 aa		13.58	□□□□□ -0.24
PSMD2-220	ENST00000496925	NEFM	P07197	916 aa		13.57	□□□□□ -0.24
PSMD2-220	ENST00000496925	SRGN	P10124	158 aa		13.57	□□□□□ -0.24
PSMD2-220	ENST00000496925	STYK1	Q6J9G0	422 aa		13.57	□□□□□ -0.24
PSMD2-220	ENST00000496925	MASTL	Q96GX5	879 aa		13.57	□□□□□ -0.24
PSMD2-220	ENST00000496925	TCERG1	O14776	1098 aa	Known RBP	13.56	□□□□□ -0.24
PSMD2-220	ENST00000496925	CAPN15	O75808	1086 aa		13.56	□□□□□ -0.24
PSMD2-220	ENST00000496925	MYL6B	P14649	208 aa		13.56	□□□□□ -0.24
PSMD2-220	ENST00000496925	TAOK3	Q9H2K8	898 aa		13.56	□□□□□ -0.24
PSMD2-220	ENST00000496925	ZNF652	Q9Y2D9	606 aa		13.56	□□□□□ -0.24
PSMD2-220	ENST00000496925	CEP350	Q5VT06	3117 aa		13.55	□□□□□ -0.24
PSMD2-220	ENST00000496925	POTEI	P0CG38	1075 aa		13.55	□□□□□ -0.24
PSMD2-220	ENST00000496925	POTEJ	P0CG39	1038 aa		13.55	□□□□□ -0.24
PSMD2-220	ENST00000496925	TPTE2	Q6XPS3	522 aa		13.55	□□□□□ -0.24
PSMD2-220	ENST00000496925	NUTM1	Q86Y26	1132 aa		13.55	□□□□□ -0.24
PSMD2-220	ENST00000496925	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMD2-220	ENST00000496925	PDZRN3	Q9UPQ7	1066 aa		13.55	□□□□□ -0.24
PSMD2-220	ENST00000496925	GPT	P24298	496 aa		13.54	□□□□□ -0.24
PSMD2-220	ENST00000496925	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMD2-220	ENST00000496925	AFDN	P55196	1824 aa	Known RBP	13.54	□□□□□ -0.24
PSMD2-220	ENST00000496925	BRCA1	P38398	1863 aa	Known RBP	13.53	□□□□□ -0.24
PSMD2-220	ENST00000496925	HTATSF1	O43719	755 aa	Known RBP	13.53	□□□□□ -0.24
PSMD2-220	ENST00000496925	NPR1	P16066	1061 aa		13.53	□□□□□ -0.24
PSMD2-220	ENST00000496925	CLEC4G	Q6UXB4	293 aa		13.53	□□□□□ -0.24
PSMD2-220	ENST00000496925	TTLL7	Q6ZT98	887 aa		13.53	□□□□□ -0.24
PSMD2-220	ENST00000496925	ZBTB3	Q9H5J0	574 aa		13.53	□□□□□ -0.24
PSMD2-220	ENST00000496925	ARFGEF1	Q9Y6D6	1849 aa		13.53	□□□□□ -0.24
PSMD2-220	ENST00000496925	EAPP	Q56P03	285 aa	Predicted RBP	13.52	□□□□□ -0.25
PSMD2-220	ENST00000496925	ZNF428	Q96B54	188 aa		13.52	□□□□□ -0.25
PSMD2-220	ENST00000496925	CLEC11A	Q9Y240	323 aa		13.52	□□□□□ -0.25
PSMD2-220	ENST00000496925	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.52	□□□□□ -0.25
PSMD2-220	ENST00000496925	EIF2S2	P20042	333 aa	Known RBP	13.51	□□□□□ -0.25
PSMD2-220	ENST00000496925	EIF4A1	P60842	406 aa	Known RBP	13.51	□□□□□ -0.25
PSMD2-220	ENST00000496925	NFE2L2	Q16236	605 aa		13.51	□□□□□ -0.25
PSMD2-220	ENST00000496925	CCDC93	Q567U6	631 aa		13.51	□□□□□ -0.25
PSMD2-220	ENST00000496925	SLC51A	Q86UW1	340 aa		13.51	□□□□□ -0.25
PSMD2-220	ENST00000496925	SYNE4	Q8N205	404 aa		13.51	□□□□□ -0.25
PSMD2-220	ENST00000496925	C7orf43	Q8WVR3	580 aa		13.51	□□□□□ -0.25
PSMD2-220	ENST00000496925	NECTIN2	Q92692	538 aa		13.51	□□□□□ -0.25
PSMD2-220	ENST00000496925	MKRN1	Q9UHC7	482 aa	Known RBP	13.51	□□□□□ -0.25
PSMD2-220	ENST00000496925	CHADL	Q6NUI6	762 aa		13.5	□□□□□ -0.25
PSMD2-220	ENST00000496925	KIF6	Q6ZMV9	814 aa		13.5	□□□□□ -0.25
PSMD2-220	ENST00000496925	JMY	Q8N9B5	988 aa		13.5	□□□□□ -0.25
PSMD2-220	ENST00000496925	PNISR	Q8TF01	805 aa	Known RBP	13.5	□□□□□ -0.25
PSMD2-220	ENST00000496925	PLEKHF1	Q96S99	279 aa		13.5	□□□□□ -0.25
PSMD2-220	ENST00000496925	UBR2	Q8IWV8	1755 aa		13.5	□□□□□ -0.25
PSMD2-220	ENST00000496925	NRXN2	Q9P2S2	1712 aa		13.5	□□□□□ -0.25
PSMD2-220	ENST00000496925	MAPK8IP3	Q9UPT6	1336 aa		13.49	□□□□□ -0.25
PSMD2-220	ENST00000496925	ANXA1	P04083	346 aa		13.49	□□□□□ -0.25
PSMD2-220	ENST00000496925	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
PSMD2-220	ENST00000496925	NEUROD2	Q15784	382 aa		13.49	□□□□□ -0.25
PSMD2-220	ENST00000496925	SOGA3	Q5TF21	947 aa		13.49	□□□□□ -0.25
PSMD2-220	ENST00000496925	SUSD4	Q5VX71	490 aa		13.49	□□□□□ -0.25
PSMD2-220	ENST00000496925	ZNF541	Q9H0D2	1346 aa		13.48	□□□□□ -0.25
PSMD2-220	ENST00000496925	HSPA1A	P0DMV8	641 aa	Known RBP	13.48	□□□□□ -0.25
PSMD2-220	ENST00000496925	HSPA1B	P0DMV9	641 aa	Known RBP	13.48	□□□□□ -0.25
PSMD2-220	ENST00000496925	RIPK4	P57078	832 aa		13.48	□□□□□ -0.25
PSMD2-220	ENST00000496925	TSPYL4	Q9UJ04	414 aa		13.48	□□□□□ -0.25
PSMD2-220	ENST00000496925	LAS1L	Q9Y4W2	734 aa	Known RBP	13.48	□□□□□ -0.25
PSMD2-220	ENST00000496925	GJA3	Q9Y6H8	435 aa		13.48	□□□□□ -0.25
PSMD2-220	ENST00000496925	SBF1	O95248	1867 aa		13.48	□□□□□ -0.25
PSMD2-220	ENST00000496925	VIRMA	Q69YN4	1812 aa	Known RBP	13.48	□□□□□ -0.25
PSMD2-220	ENST00000496925	LTBP3	Q9NS15	1303 aa		13.47	□□□□□ -0.25
PSMD2-220	ENST00000496925	ALDH1B1	P30837	517 aa		13.47	□□□□□ -0.25
PSMD2-220	ENST00000496925	AIMP1	Q12904	312 aa	Known RBP	13.47	□□□□□ -0.25
PSMD2-220	ENST00000496925	CCDC146	Q8IYE0	955 aa		13.47	□□□□□ -0.25
PSMD2-220	ENST00000496925	RPGR	Q92834	1020 aa	Known RBP	13.47	□□□□□ -0.25
PSMD2-220	ENST00000496925	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.47	□□□□□ -0.25
PSMD2-220	ENST00000496925	MAP3K15	Q6ZN16	1313 aa		13.46	□□□□□ -0.25
PSMD2-220	ENST00000496925	KLRG2	A4D1S0	409 aa	Predicted RBP	13.46	□□□□□ -0.25
PSMD2-220	ENST00000496925	C3orf67	Q6ZVT6	689 aa		13.46	□□□□□ -0.25
PSMD2-220	ENST00000496925	RTKN2	Q8IZC4	609 aa		13.46	□□□□□ -0.25
PSMD2-220	ENST00000496925	TNS4	Q8IZW8	715 aa		13.46	□□□□□ -0.25
PSMD2-220	ENST00000496925	NYX	Q9GZU5	481 aa		13.46	□□□□□ -0.25
PSMD2-220	ENST00000496925	ANKRD31	Q8N7Z5	1873 aa		13.46	□□□□□ -0.26
PSMD2-220	ENST00000496925	SLX4	Q8IY92	1834 aa		13.46	□□□□□ -0.26
PSMD2-220	ENST00000496925	ERVV-1	B6SEH8	477 aa		13.45	□□□□□ -0.26
PSMD2-220	ENST00000496925	IARS	P41252	1262 aa	Known RBP	13.45	□□□□□ -0.26
PSMD2-220	ENST00000496925	DDX10	Q13206	875 aa	Known RBP	13.45	□□□□□ -0.26
PSMD2-220	ENST00000496925	PNN	Q9H307	717 aa	Known RBP	13.45	□□□□□ -0.26
PSMD2-220	ENST00000496925	HACL1	Q9UJ83	578 aa		13.45	□□□□□ -0.26
PSMD2-220	ENST00000496925	ABCC12	Q96J65	1359 aa		13.45	□□□□□ -0.26
PSMD2-220	ENST00000496925	WDR90	Q96KV7	1748 aa		13.44	□□□□□ -0.26
PSMD2-220	ENST00000496925	RNF123	Q5XPI4	1314 aa		13.44	□□□□□ -0.26
PSMD2-220	ENST00000496925	UBN2	Q6ZU65	1347 aa		13.44	□□□□□ -0.26
PSMD2-220	ENST00000496925	IQCA1L	A6NCM1	817 aa		13.44	□□□□□ -0.26
PSMD2-220	ENST00000496925	PROSER3	Q2NL68	480 aa		13.44	□□□□□ -0.26
PSMD2-220	ENST00000496925	MAP1S	Q66K74	1059 aa	Predicted RBP	13.44	□□□□□ -0.26
PSMD2-220	ENST00000496925	RBM17	Q96I25	401 aa	Known RBP	13.44	□□□□□ -0.26
PSMD2-220	ENST00000496925	SIPA1L3	O60292	1781 aa	Predicted RBP	13.44	□□□□□ -0.26
PSMD2-220	ENST00000496925	COL11A2	P13942	1736 aa	Predicted RBP	13.43	□□□□□ -0.26
PSMD2-220	ENST00000496925	EPHX2	P34913	555 aa		13.43	□□□□□ -0.26
PSMD2-220	ENST00000496925	LDHD	Q86WU2	507 aa		13.43	□□□□□ -0.26
PSMD2-220	ENST00000496925	JDP2	Q8WYK2	163 aa		13.43	□□□□□ -0.26
PSMD2-220	ENST00000496925	SCN7A	Q01118	1682 aa		13.43	□□□□□ -0.26
PSMD2-220	ENST00000496925	PPEF1	O14829	653 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMD2-220	ENST00000496925	EIF6	P56537	245 aa	Known RBP	13.42	□□□□□ -0.26
PSMD2-220	ENST00000496925	FMR1	Q06787	632 aa	Known RBP eCLIP	13.42	□□□□□ -0.26	1e-7	■■□□□ 14.4
PSMD2-220	ENST00000496925	KRT24	Q2M2I5	525 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms